mRNA_M-pyrifera_M_contig110113.2115.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: A0A5A8D6S8_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D6S8_CAFRO) HSP 1 Score: 269 bits (688), Expect = 1.600e-86 Identity = 131/200 (65.50%), Postives = 160/200 (80.00%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGEASHESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
+LGTH LLE AK ++ F+HVSTDEVYGEGSSGE SHE T ++PTNPY+A+KAGAE+LV AY RSF LP++ITRGNNVYGPHQFPEKI+PKF+ Q++ GRKLTLHG+G NTRNYLFVEDVARAFDV+LH+ E+G VYNIGG NE SN +VA+T++ M + + DV+A+ A AK + + DRPFNDLRYPL
Sbjct: 120 VLGTHSLLEAAKANRARVSRFIHVSTDEVYGEGSSGEPSHEGTEMDPTNPYSASKAGAEHLVTAYRRSFDLPIIITRGNNVYGPHQFPEKIVPKFIAQISRGRKLTLHGTGTNTRNYLFVEDVARAFDVILHKGEIGGVYNIGGDNERSNLEVAKTLLAAMGVIPDPDVDAD-------ATAKHITFVSDRPFNDLRYPL 312
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: A0A7S1CN91_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN91_9STRA) HSP 1 Score: 259 bits (662), Expect = 5.880e-83 Identity = 133/202 (65.84%), Postives = 158/202 (78.22%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGE--ASHESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
ILGTHVLLEGAKL+ QL+LF+HVSTDEVYGEG G+ A HE ++LEPTNPYAATKAGAEYLVKAY RSF LP +ITRGNNVYGPHQFPEKIIPKF+NQL G K+TLHG G+NTRNYLFVEDVA AFD+VLH+ + G+++N+GG NE+ N VA +I+++ +G A TDE ++ DRPFNDLRYPL
Sbjct: 111 ILGTHVLLEGAKLLKSQLKLFLHVSTDEVYGEGKEGDDAAMHEGSILEPTNPYAATKAGAEYLVKAYARSFGLPTLITRGNNVYGPHQFPEKIIPKFINQLLRGHKVTLHGDGQNTRNYLFVEDVAAAFDLVLHKGKPGEIFNVGGDNEVPNIDVARLLIRKI--MG-------ADADTDE----WITLVPDRPFNDLRYPL 299
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: A0A8J2SVE1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVE1_9STRA) HSP 1 Score: 246 bits (628), Expect = 5.970e-78 Identity = 133/202 (65.84%), Postives = 152/202 (75.25%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGEASH--ESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
ILGTHVLLE AK+ + FVHVSTDEVYGEG S E + E VLEPTNPYAATKA AE+LVK+YHRSF LPV+ITRGNNVYGPHQFPEK+IPKF NQLA GR +TLHG+GENTRN+LFVEDVARAFD +LH+AE+G+VYNIGGSNE SN VA+ +IK M G D EA + + DR FNDLRY +
Sbjct: 122 ILGTHVLLEAAKV--HDVVRFVHVSTDEVYGEGESMETAPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFGLPVIITRGNNVYGPHQFPEKLIPKFTNQLARGRAVTLHGTGENTRNFLFVEDVARAFDCILHKAEIGKVYNIGGSNEQSNLAVAKQLIKIM---GLEDQEA-----------SLISFVPDRAFNDLRYTI 307
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: A0A812T4F9_9DINO (RHM2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812T4F9_9DINO) HSP 1 Score: 247 bits (630), Expect = 2.340e-76 Identity = 132/249 (53.01%), Postives = 160/249 (64.26%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGEASHESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQ-------------------------------------------------LALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
+LGTH LLE AK ++ F+HVSTDEVYGEGSSGE SHE T ++PTNPY+A+KAGAE+LV AY RSF LP++ITRGNNVYGPHQFPEKI+PKF+ Q L+ GRKLTLHG+G NTRNYLFVEDVARAFDV+LH+ E+G VYNIGG NE SN +VA+T++ M + + DV+A+ A AK + + DRPFNDLRYPL
Sbjct: 194 VLGTHSLLEAAKANRARVSRFIHVSTDEVYGEGSSGEPSHEGTEMDPTNPYSASKAGAEHLVTAYRRSFDLPIIITRGNNVYGPHQFPEKIVPKFIAQIVSCALSAEPVPQPPRAGAARSARGRRPLGFTSRRFAVVTGPPLIASPPLSRGRKLTLHGTGTNTRNYLFVEDVARAFDVILHKGEIGGVYNIGGDNERSNLEVAKTLLAAMGVIPDPDVDAD-------ATAKHITFVSDRPFNDLRYPL 435
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: F0Y3X2_AURAN (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3X2_AURAN) HSP 1 Score: 239 bits (609), Expect = 2.170e-75 Identity = 125/202 (61.88%), Postives = 151/202 (74.75%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGEASH--ESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
I+GTHVLLE AK+ ++ FVHVSTDEVYGEG + E E VLEPTNPYAATKA AE+LVK+YHRSF+LP++ITRGNNVYGPHQFPEK+IPKFVNQLA GR +TLHG+G NTRN+L+VEDVARAFD +LH+A VG++YNIGG NE SN VA+ +I+ M G D E+ + + DR FNDLRY +
Sbjct: 98 IMGTHVLLEAAKV--HSIKRFVHVSTDEVYGEGENMETEPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFQLPIIITRGNNVYGPHQFPEKLIPKFVNQLARGRPVTLHGTGANTRNFLYVEDVARAFDCILHKAAVGKIYNIGGCNERSNLSVAKELIRIM---GLSDNES-----------SLITFVPDRAFNDLRYTI 283
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: A0A7S2CKW6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKW6_9STRA) HSP 1 Score: 239 bits (610), Expect = 4.170e-75 Identity = 128/201 (63.68%), Postives = 152/201 (75.62%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGE-ASHESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
I GTHVLLE AK+ G ++ F+HVSTDEVYGEG E E VLEPTNPYAATKAGAE+LVK+YHRSF LPV+ITRGNNVYGPHQ+PEKIIPKF+NQL GR +TLHG+G+NTRN+L+VEDVARAF+V+L + +VGQ+YNIGG+NE+SN VA+ +I M G D EAL FV DR FNDLRY +
Sbjct: 116 IFGTHVLLESAKIHG--IKRFIHVSTDEVYGEGGETEDPMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFDLPVIITRGNNVYGPHQYPEKIIPKFINQLQRGRAVTLHGTGQNTRNFLYVEDVARAFEVILFKGQVGQIYNIGGTNEISNVDVAKMLIDYM---GMSD--------RTEALMTFVP---DRVFNDLRYTI 300
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: K0R471_THAOC (NAD(P)-bd_dom domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R471_THAOC) HSP 1 Score: 239 bits (609), Expect = 5.560e-75 Identity = 128/202 (63.37%), Postives = 148/202 (73.27%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSS--GEASHESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
I GTHVLLE AK +R F+HVSTDEVYGEG + EA E VLEPTNPYAATKAGAE+LVK+YHRSFKLP VITRGNNVYGPHQFPEK+IPKF NQL GR++TLHG G NTRN+L+VEDVARAF+V+LH+A GQ+ NIGG NE+SN VA+T+I LG D E E + + DR FNDLRY +
Sbjct: 126 IYGTHVLLESAKN-HKTIRRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQLLRGRQVTLHGDGSNTRNFLYVEDVARAFEVILHKASPGQILNIGGENEISNLDVAKTLIDI---LGMKDKEEE-----------LISFVPDRKFNDLRYTI 312
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: A0A7S2RRE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRE1_9STRA) HSP 1 Score: 238 bits (608), Expect = 1.900e-74 Identity = 123/201 (61.19%), Postives = 148/201 (73.63%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGE-ASHESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
I GTHVLLE AK+ G + F+HVSTDEVYGEGS G+ E VLEPTNPYAATKA AE++VK+YHRSF LPV+ITRGNNVYGPHQ+PEK+IPKF NQL GR +TLHG G+NTRN+LFV DVARAF+ +L + +GQ+YNIGGSNE+SN +VA+++I LG D E E + Y DR FNDLRY +
Sbjct: 147 IYGTHVLLESAKIYG--IERFIHVSTDEVYGEGSDGQDPMTEEQVLEPTNPYAATKAAAEFIVKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFTNQLLRGRAVTLHGDGQNTRNFLFVTDVARAFEAILFKGAIGQIYNIGGSNEISNLEVAKSLIAH---LGCSDREGE-----------LISYVPDRCFNDLRYTI 331
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: A0A7S2RGU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGU2_9STRA) HSP 1 Score: 233 bits (594), Expect = 5.480e-74 Identity = 116/163 (71.17%), Postives = 133/163 (81.60%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGEAS--HESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEM 483
I GTHVLLE AK +R F+HVSTDEVYGEG +A E VLEPTNPYAATKAGAE+LVK+YHRSFKLP +ITRGNNVYGPHQFPEK+IPKF+NQL R +TLHG G NTRN+LFVEDVARAFDV+LH+ EVG +YNIGG NE+SN VA+++IK M
Sbjct: 109 IYGTHVLLESAKNC-ETIRRFIHVSTDEVYGEGEDFDAKPMDEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCIITRGNNVYGPHQFPEKLIPKFINQLLRDRPVTLHGDGSNTRNFLFVEDVARAFDVILHKGEVGMIYNIGGDNEVSNVNVAKSLIKLM 270
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Match: B8C5W5_THAPS (Dtdp-glucose 4,6-dehydratase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W5_THAPS) HSP 1 Score: 236 bits (601), Expect = 7.100e-74 Identity = 123/202 (60.89%), Postives = 149/202 (73.76%), Query Frame = 1
Query: 1 ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSS--GEASHESTVLEPTNPYAATKAGAEYLVKAYHRSFKLPVVITRGNNVYGPHQFPEKIIPKFVNQLALGRKLTLHGSGENTRNYLFVEDVARAFDVVLHRAEVGQVYNIGGSNELSNRKVAETIIKEMTDLGEGDVEAETGALTDEALAKFVDYTVDRPFNDLRYPL 600
I GTHV+LE AK R F+HVSTDEVYGEG + EA E VLEPTNPYAATKAGAE+LVK+YHRSFKLP VITRGNNVYGPHQFPEK+IPKF NQ+ GR +TLHG G NTRN+L+VEDVARAF+V++H+A G +YNIGG NE+SN +VA+ +I+ LG+GD + + + + DR FNDLRY +
Sbjct: 115 IYGTHVMLEAAKCHRGMKR-FIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQILRGRPVTLHGDGSNTRNFLYVEDVARAFEVLVHKASPGMIYNIGGDNEISNLEVAKKLIEI---LGKGD-----------QMDELITFVPDRKFNDLRYTI 301 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110113.2115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110113.2115.1 >prot_M-pyrifera_M_contig110113.2115.1 ID=prot_M-pyrifera_M_contig110113.2115.1|Name=mRNA_M-pyrifera_M_contig110113.2115.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp ILGTHVLLEGAKLIGPQLRLFVHVSTDEVYGEGSSGEASHESTVLEPTNPback to top mRNA from alignment at M-pyrifera_M_contig110113:2..601- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110113.2115.1 ID=mRNA_M-pyrifera_M_contig110113.2115.1|Name=mRNA_M-pyrifera_M_contig110113.2115.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig110113:2..601- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110113:2..601- >mRNA_M-pyrifera_M_contig110113.2115.1 ID=mRNA_M-pyrifera_M_contig110113.2115.1|Name=mRNA_M-pyrifera_M_contig110113.2115.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig110113:2..601- (Macrocystis pyrifera P11B4 male)back to top |