mRNA_M-pyrifera_M_contig109954.2079.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A2D8QRV5_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D8QRV5_9GAMM) HSP 1 Score: 303 bits (776), Expect = 4.880e-98 Identity = 144/198 (72.73%), Postives = 169/198 (85.35%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVP 594
IL+ +RE+GCFGLSVPERYGG PD+ ED L M+VVTEELSRASL AGSLITRPEIMA+A+ GGTE+Q+ WLP+IA+G+PLCGIAITEPD GSDVA+ R KATR GWLLNG+KTWSTFAGKSG+LL LARTDPDP LGH+GL+LF+VEK + + +EFS Q GG L+G AIPT+GYRGMHSF+LFFDD+FVP
Sbjct: 178 ILSGVRELGCFGLSVPERYGGLLPDNQEDSLGMIVVTEELSRASLGGAGSLITRPEIMARALMEGGTEDQKRYWLPRIADGEPLCGIAITEPDYGSDVASARLKATRNQQGWLLNGSKTWSTFAGKSGVLLTLARTDPDPSLGHRGLTLFMVEKPAFDGEEFSFEQKGGGSLTGQAIPTVGYRGMHSFSLFFDDFFVP 375
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A3D0ZVG3_9GAMM (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0ZVG3_9GAMM) HSP 1 Score: 298 bits (764), Expect = 1.140e-97 Identity = 143/198 (72.22%), Postives = 168/198 (84.85%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVP 594
IL+ +RE+GCFGLSVPERYGG PD+ ED L M+VVTEELSRASL AGSLITRPEIMA+A+ GGTE+Q+ WLP+IA+G+PLCGIAITEPD GSDVA+ R KATR GWLLNG+KTWSTFAGKSG+LL LARTDPD LGH+GL+LF+VEK + + +EFS Q GG L+G AIPT+GYRGMHSF+LFFDD+FVP
Sbjct: 63 ILSGVRELGCFGLSVPERYGGLLPDNQEDSLGMIVVTEELSRASLGGAGSLITRPEIMARALMEGGTEDQKRYWLPRIADGEPLCGIAITEPDYGSDVASARLKATRNQEGWLLNGSKTWSTFAGKSGVLLTLARTDPDLSLGHRGLTLFMVEKPAFDGEEFSFEQEGGGILTGQAIPTVGYRGMHSFSLFFDDFFVP 260
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A3C0TA07_9GAMM (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0TA07_9GAMM) HSP 1 Score: 295 bits (754), Expect = 7.140e-96 Identity = 140/199 (70.35%), Postives = 165/199 (82.91%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVPD 597
IL +RE+GCFGLSVP+RY G PD ED L M+VVTEELSR SL AGSLITRPEIMA+A+ GGTEEQ+A WLPK+A G+PLC IAITEPD GSDVA++R KAT + GW+L+GAKTWSTFAGK+G+LLVLARTDPD LGH+GLSLF+VEK S +E+ F + QPQGG L G AIPT+GYRGMHS+ LFFD++ VPD
Sbjct: 85 ILKGIRELGCFGLSVPQRYNGLLPDDQEDSLGMIVVTEELSRVSLGGAGSLITRPEIMARALMQGGTEEQKAHWLPKLAAGNPLCAIAITEPDFGSDVASVRLKATATEEGWILDGAKTWSTFAGKAGVLLVLARTDPDLNLGHRGLSLFMVEKPSFDEESFEVEQPQGGMLFGKAIPTVGYRGMHSYQLFFDNFLVPD 283
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A2G6KWG2_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2G6KWG2_9GAMM) HSP 1 Score: 297 bits (761), Expect = 1.280e-95 Identity = 139/199 (69.85%), Postives = 165/199 (82.91%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVPD 597
IL L EMGCFGLS+PE+YGG PD ED++ M+VVTEELSR SLAAAGSLITRPEI++KA+ GGT EQ+ WLPK+A GDPLC +AITEPD GSDVA M+ KA + +GGW+LNG KTW TF GK+G+LLVLART+PDPGLGHKGLS+F+ EK S E +F +QP+GGR+SG AIPTIGYRGMHSF +FFD +FVPD
Sbjct: 192 ILGGLVEMGCFGLSIPEQYGGLQPDDHEDNMGMIVVTEELSRGSLAAAGSLITRPEILSKALLAGGTGEQKQKWLPKLAVGDPLCAVAITEPDYGSDVAGMKLKAEKVEGGWVLNGNKTWCTFGGKAGVLLVLARTNPDPGLGHKGLSMFLAEKPSFEGHDFEHTQPEGGRISGKAIPTIGYRGMHSFDVFFDSYFVPD 390
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A2E8K3N6_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8K3N6_9GAMM) HSP 1 Score: 296 bits (759), Expect = 1.800e-95 Identity = 142/198 (71.72%), Postives = 164/198 (82.83%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVP 594
IL LRE+GCFGLSVP+R+GG PD ED L M+VVTEELSRASL AGSLITRPEIMA+A+ GGT EQ+ WLP++A+G+ LC IAITEPD GSDVA+MR KAT D GW+LNGAKTWSTFAGK+G+LL LARTDPD LGHKGLSLF+VEK ST++ +F Q GGRL+G AIPTIGYRGMHSF LFFDD+F+P
Sbjct: 179 ILNGLRELGCFGLSVPQRFGGLLPDDHEDSLGMIVVTEELSRASLGGAGSLITRPEIMARALLEGGTSEQKDQWLPRLASGELLCAIAITEPDYGSDVASMRLKATATDEGWILNGAKTWSTFAGKAGVLLTLARTDPDLSLGHKGLSLFMVEKPSTDDDKFEFVQESGGRLTGNAIPTIGYRGMHSFELFFDDFFIP 376
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A7C7S921_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7S921_9GAMM) HSP 1 Score: 296 bits (758), Expect = 2.410e-95 Identity = 141/198 (71.21%), Postives = 163/198 (82.32%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVP 594
IL +RE+GCFGLSVP+RYGG PD ED+L M+VVTEELSR SL AGSLITRPEIMA+A+ GGTEEQ+ WLP+IA G PLC IAITEPD GSDVA+M+ KAT+ D GW+LNGAK WSTFAGKSG+LL LARTDPDP GH+GLSLF+VEK + + F +SQ GGRLSG +IPT+GYRGMHSF LFFDD+FVP
Sbjct: 177 ILDGVRELGCFGLSVPQRYGGLLPDDKEDNLGMIVVTEELSRGSLGGAGSLITRPEIMARALIAGGTEEQKQHWLPRIAEGRPLCAIAITEPDYGSDVASMKLKATQVDDGWVLNGAKAWSTFAGKSGVLLTLARTDPDPSAGHRGLSLFMVEKPEYDGESFQVSQEGGGRLSGKSIPTLGYRGMHSFNLFFDDFFVP 374
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A657AG71_9GAMM (Acyl-CoA dehydrogenase n=6 Tax=Oleiphilus TaxID=141450 RepID=A0A657AG71_9GAMM) HSP 1 Score: 294 bits (752), Expect = 2.870e-94 Identity = 139/199 (69.85%), Postives = 162/199 (81.41%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVPD 597
IL PL EMGCFGLS+PERY G PD ED++ M+VVTEELSR SLAAAGSLITRPEI++KA+ GGTEEQ+ WLPK+A DP C +AITEPD GSDVA M+ KA + DGGW+LNGAKTW TF GK+G+LL LART+PDPGLGHKGLS+F+VEK S + +F Q GG+LSG AIPTIGYRGMHSF +FFD+ FVPD
Sbjct: 192 ILKPLVEMGCFGLSIPERYDGLQPDDREDNMGMIVVTEELSRGSLAAAGSLITRPEILSKALMAGGTEEQKQYWLPKLAWADPSCAVAITEPDFGSDVAGMKLKAEKVDGGWVLNGAKTWCTFGGKAGVLLTLARTNPDPGLGHKGLSMFLVEKPSFDGHDFEYEQEGGGKLSGKAIPTIGYRGMHSFDVFFDNVFVPD 390
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A011QUW7_9PROT (Acyl-CoA dehydrogenase n=4 Tax=unclassified Candidatus Accumulibacter TaxID=2619054 RepID=A0A011QUW7_9PROT) HSP 1 Score: 292 bits (747), Expect = 1.840e-93 Identity = 137/200 (68.50%), Postives = 162/200 (81.00%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVPDD 600
IL PL EMGCFGLS+PERYGG D ED++ M+VVTEELSR SL AGSLITRPEI+++++ GGTEEQR WLP++A GDPLC IA+TEPD GSDVAAMR KAT+ DGGW+L+G KTW T AGK+G+LLVLAR++PD LGHKGLS+F+VEK S E +F QPQGG LSG AI TIGYRGMHS+ +FFD FVPD+
Sbjct: 197 ILEPLTEMGCFGLSIPERYGGIQSDDHEDNMGMIVVTEELSRGSLGGAGSLITRPEILSRSLLKGGTEEQREKWLPRVAMGDPLCAIAVTEPDTGSDVAAMRLKATKCDGGWILDGVKTWCTMAGKAGVLLVLARSNPDRSLGHKGLSMFLVEKDSYEGHDFEYRQPQGGVLSGRAIATIGYRGMHSYEVFFDHVFVPDE 396
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A1A8XHX7_9PROT (Acyl-CoA dehydrogenase domain protein n=1 Tax=Candidatus Accumulibacter aalborgensis TaxID=1860102 RepID=A0A1A8XHX7_9PROT) HSP 1 Score: 291 bits (746), Expect = 2.530e-93 Identity = 137/200 (68.50%), Postives = 163/200 (81.50%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVPDD 600
IL PL EMGCFGLS+PERYGG D ED++ M+VVTEELSR SL AAGSLITRPEI+++A+ GGTEEQR WLP++A GDPLC +A+TEPDAGSDVAAMR KAT+ DGGW+L+G KTW T AGK+G+LLVLAR++PD LGHKGLS+F+VEK S E +F Q QGG L+G AI TIGYRGMHS+ +FFD FVPD+
Sbjct: 197 ILDPLNEMGCFGLSIPERYGGIQSDDHEDNMGMIVVTEELSRGSLGAAGSLITRPEILSRALLKGGTEEQRQKWLPQVAMGDPLCAVAVTEPDAGSDVAAMRLKATKCDGGWILDGVKTWCTMAGKAGVLLVLARSNPDRSLGHKGLSMFLVEKDSYEGHDFEYHQAQGGVLTGRAISTIGYRGMHSYEVFFDHVFVPDE 396
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Match: A0A7X6DJV5_9BURK (Acyl-CoA dehydrogenase n=1 Tax=Ramlibacter lithotrophicus TaxID=2606681 RepID=A0A7X6DJV5_9BURK) HSP 1 Score: 288 bits (737), Expect = 5.820e-92 Identity = 137/198 (69.19%), Postives = 163/198 (82.32%), Query Frame = 1
Query: 1 ILTPLREMGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIMAKAIYHGGTEEQRAAWLPKIANGDPLCGIAITEPDAGSDVAAMRFKATRADGGWLLNGAKTWSTFAGKSGILLVLARTDPDPGLGHKGLSLFIVEKTSTEEKEFSLSQPQGGRLSGAAIPTIGYRGMHSFTLFFDDWFVP 594
+L P+REMG FGLS+PE YGGT+P G D MVVVTE LS ASLAAAGSLITRPEI+A+A+ GGT+ Q+ WLP +A GDPLC IAITEPD GSDVA++ KATR +GGWLLNGAKTW TFAGK+G+L+V+ARTDPD GH+GLSL +VEK STE+ EF+++Q +GGRL G AIPTIGYRGMHSF L F+D+FVP
Sbjct: 185 LLQPMREMGVFGLSIPEAYGGTAPADGHDTQMMVVVTEALSEASLAAAGSLITRPEILARALLAGGTQAQKQRWLPGLAAGDPLCAIAITEPDFGSDVASLALKATRTEGGWLLNGAKTWCTFAGKAGVLMVVARTDPDRSAGHRGLSLLLVEKPSTEDHEFTVTQERGGRLQGRAIPTIGYRGMHSFDLAFEDYFVP 382 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109954.2079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109954.2079.1 >prot_M-pyrifera_M_contig109954.2079.1 ID=prot_M-pyrifera_M_contig109954.2079.1|Name=mRNA_M-pyrifera_M_contig109954.2079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp MGCFGLSVPERYGGTSPDSGEDHLAMVVVTEELSRASLAAAGSLITRPEIback to top mRNA from alignment at M-pyrifera_M_contig109954:2..601- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109954.2079.1 ID=mRNA_M-pyrifera_M_contig109954.2079.1|Name=mRNA_M-pyrifera_M_contig109954.2079.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig109954:2..601- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109954:2..601- >mRNA_M-pyrifera_M_contig109954.2079.1 ID=mRNA_M-pyrifera_M_contig109954.2079.1|Name=mRNA_M-pyrifera_M_contig109954.2079.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig109954:2..601- (Macrocystis pyrifera P11B4 male)back to top |