mRNA_M-pyrifera_M_contig109921.2072.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: D3B3S3_POLPP (Component of the counting factor complex n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B3S3_POLPP) HSP 1 Score: 95.1 bits (235), Expect = 2.940e-20 Identity = 54/145 (37.24%), Postives = 79/145 (54.48%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGMP 435
+ GRN+FPGNC+ GQLTD G+ Q LG +R LY + YGLL + + ++ R+ R+V S L L+P A S ++ D+ TMD Y++N+SPN LCP N + P YQQ + + L + + + LG P
Sbjct: 90 LPGRNFFPGNCSLGQLTDLGFAQHSQLGTTFRQLYVQKYGLLSEHLNLSE-VWVRSTDVYRTVQSAQSELTALYPPPPNAAS-MIDVIDIHTMDDYHENMSPNTVLCPALNTLYNNLTSLPVYQQFIQQ-NAQLQQTIMSTLGEP 231
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: CF60_DICDI (Counting factor 60 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=CF60_DICDI) HSP 1 Score: 92.0 bits (227), Expect = 4.100e-19 Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQA--LYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCP 324
M R YFPGNC+ GQLT G+QQ LG++ R LY + Y LLPS S A ++ R+ R++ S+ G L LFP + + +++TMD YY+N++PNP LCP
Sbjct: 101 MPNREYFPGNCSDGQLTSLGFQQHLQLGQSLRQLYVDKYELLPSELSVDAASTIWVRSTDVPRTIQSVQGHLTALFPPTTVTSGSGIPIININTMDNYYENMTPNPTLCP 210
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: F0ZB15_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZB15_DICPU) HSP 1 Score: 91.7 bits (226), Expect = 5.470e-19 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQ 375
M R YFPGNC+ GQLT G+ Q LG+A R LY + Y LLP+ + ++ R+ R++ S L LFP + + +++TMD+YY+N++PN LCP +TP YQ+
Sbjct: 98 MPNREYFPGNCSDGQLTSLGYSQHIQLGQALRELYVDKYQLLPTQLTDSNTIWVRSTDVPRTIQSAQAHLTALFPPAPVSNGEGIAVININTMDSYYENMTPNSVLCPELAILLANATSTPEYQE 222
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: A0A3M6U1X5_POCDA (Uncharacterized protein (Fragment) n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U1X5_POCDA) HSP 1 Score: 88.6 bits (218), Expect = 3.560e-18 Identity = 47/144 (32.64%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGM 432
+ GRN G+C G LT +G++Q G+ R Y + L P+ S+ + ++FRT +R+ S L G+FP + T S + ++ D++ MD +D++ PNP LCP N + EF A+ +++QH ++ + PL ++ LG+
Sbjct: 105 IPGRNDMKGDCGLGHLTSKGYKQEEDNGKNLRKAYVDTGFLSPNYSN--REVFFRTDDMSRTRQSAQALAIGMFPPS-TPLSGKSQVVDINVMDKEFDDIEPNPNLCPKLNQYRKEFFASESWKQHYNEITEPLMAEVEKALGL 245
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: A0A2B4RRT5_STYPI (Counting factor 60 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RRT5_STYPI) HSP 1 Score: 89.4 bits (220), Expect = 4.460e-18 Identity = 49/144 (34.03%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGM 432
M GRN G+C G LT +G++Q GR R +Y + L P+ SS ++FRT +R+ S L G+FP + + S + ++ D++ MD +D++ PNP LCP N + EF A+ +++QH ++ + PL ++ LG+
Sbjct: 109 MPGRNDMKGDCGLGHLTFKGYKQEEVNGRNLRQVYVDTGFLSPNYSS--HEVFFRTDDMSRTRQSAQALALGMFPPSAPS-SGKSQVVDINVMDKDFDDMEPNPNLCPKLNQYQKEFFASESWKQHYNEKTEPLLAEVEKALGL 249
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: A0A8J4PRD7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRD7_9MYCE) HSP 1 Score: 88.6 bits (218), Expect = 6.960e-18 Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGM 432
M R Y PGNC+ GQLT G++Q LG+ +++LY E YGLL S P +YFR+ R++ S + L+P+N G + +++TMD+Y++++SPN LCP + T Y Q + + +QL LG+
Sbjct: 99 MPNREYLPGNCSVGQLTSLGFEQHLQLGQTFQSLYIEKYGLLSSQLDPN-VMYFRSTDVPRTLQSAQAHITALYPSNSNPG-----IINLNTMDSYFEDMSPNALLCPEYGILVQNTTTTADYIQFESE-NAQFKQQLMTTLGV 235
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: UPI000F550013 (counting factor 60-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F550013) HSP 1 Score: 88.6 bits (218), Expect = 8.280e-18 Identity = 47/144 (32.64%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGM 432
+ GRN G+C G LT +G++Q G+ R Y + L P+ S+ + ++FRT +R+ S L G+FP + T S + ++ D++ MD +D++ PNP LCP N + EF A+ +++QH ++ + PL ++ LG+
Sbjct: 105 IPGRNDMKGDCGLGHLTSKGYKQEEDNGKNLRKAYVDTGFLSPNYSN--REVFFRTDDMSRTRQSAQALAIGMFPPS-TPLSGKSQVVDINVMDKEFDDIEPNPNLCPKLNQYRKEFFASESWKQHYNEITEPLMAEVEKALGL 245
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: UPI0009E4A0A7 (counting factor 60-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4A0A7) HSP 1 Score: 83.6 bits (205), Expect = 4.480e-16 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGM 432
M GRN G+C G LT +G++Q G+ +Y E L P+ SS ++FRT +R+ S L GLFP + + S + ++ D++ MD YD++ PNP LCP + EF+ + +Q+H + + PL ++ LG+
Sbjct: 165 MPGRNDINGDCGLGHLTFKGYKQQLVNGQNLHTVYVETGFLSPNYSS--HEVFFRTDDMSRTRQSAQALALGLFPLSSPS-SGKSQVVDINVMDKDYDDIEPNPRLCPKLEQYQREFIESDMWQKHYNKITKPLLIEVQQALGL 305
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: L8H9Z4_ACACA (Histidine acid phosphatase superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9Z4_ACACA) HSP 1 Score: 80.1 bits (196), Expect = 8.710e-15 Identity = 44/145 (30.34%), Postives = 79/145 (54.48%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGMP 435
+ R PG+C GQLT +G +Q +LG + R +Y + YG L S + ++ R+ R++AS LL+G++ + + S + +D+ T+DA+ DN++PN LCP E TP + H+ + + PL ++ ++ +P
Sbjct: 108 LNDRQVLPGDCMFGQLTTKGREQHLTLGNSLRQVYVDKYGFLGKQFSSDE-VWVRSTDVPRTIASAQSLLSGMYLPSDSQ-STEVPAFDLHTIDAWMDNMTPNTRLCPHLQQVYYELRQTPGWIAHMREIA-PLDAKIRSIFNLP 249
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Match: UPI001CF5C890 (counting factor 60-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5C890) HSP 1 Score: 78.2 bits (191), Expect = 4.120e-14 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 1 MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQALYFRTASEARSVASLDGLLAGLFPANGTAGSAQWELWDVDTMDAYYDNLSPNPELCPLWNNFTVEFMATPAYQQHLHDFSLPLYRQLSAVLGM 432
M GRN G+C G LT +G++Q G R Y + G L + S ++ R+ +R+ S L GLFP ++ S + +++D+ MD YD++ PNP LCP + E T ++++H F+ PL Q+ + LG+
Sbjct: 108 MPGRNVMKGDCGLGHLTFKGYKQELMNGENLRKAYVDT-GFLTNYSV--SEVFLRSDDMSRTRQSAQALALGLFPPPASS-SGKAQIFDIHVMDLNYDDMEPNPTLCPKLGQYQRECYKTDSWKKHYQQFTAPLLAQVQSALGL 247 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109921.2072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109921.2072.1 >prot_M-pyrifera_M_contig109921.2072.1 ID=prot_M-pyrifera_M_contig109921.2072.1|Name=mRNA_M-pyrifera_M_contig109921.2072.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp MQGRNYFPGNCATGQLTDRGWQQMHSLGRAYRALYGEHYGLLPSTSSPGQback to top mRNA from alignment at M-pyrifera_M_contig109921:57..491+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109921.2072.1 ID=mRNA_M-pyrifera_M_contig109921.2072.1|Name=mRNA_M-pyrifera_M_contig109921.2072.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig109921:57..491+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109921:57..491+ >mRNA_M-pyrifera_M_contig109921.2072.1 ID=mRNA_M-pyrifera_M_contig109921.2072.1|Name=mRNA_M-pyrifera_M_contig109921.2072.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig109921:57..491+ (Macrocystis pyrifera P11B4 male)back to top |