mRNA_M-pyrifera_M_contig109909.2068.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A3D5DBI0_9GAMM (Chromosome partitioning protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBI0_9GAMM) HSP 1 Score: 222 bits (566), Expect = 1.290e-71 Identity = 107/132 (81.06%), Postives = 120/132 (90.91%), Query Frame = 1
Query: 1 HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
HD L +V+R QTIVLP+VPSPIDIRAAQRFLGELR LRNVI D+KMATVANRVREG++IANELEDYL+EL+LPSGRKFPF+T+LRSS NYLRAAERGLSIFEFAP+ATA DREYW+PL RWL+S RSLP
Sbjct: 86 HDKHLSALVRRAQTIVLPIVPSPIDIRAAQRFLGELRGLRNVIKTDVKMATVANRVREGTLIANELEDYLYELKLPSGRKFPFMTVLRSSANYLRAAERGLSIFEFAPVATAADREYWNPLTRWLKSARSLP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A523PAN4_9PROT (Chromosome partitioning protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PAN4_9PROT) HSP 1 Score: 210 bits (534), Expect = 9.470e-67 Identity = 101/132 (76.52%), Postives = 114/132 (86.36%), Query Frame = 1
Query: 1 HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
HDD+L +V+RTQTI+LPVVPSPIDIRAAQRFL ELRELR+VI D+K+AT+ NRVREG+ I N LEDYLF L LPSGRK PFLT+LRSS NY+ AAERGLSIFEFAPIATA DREYW PL RWLQ+ RS+P
Sbjct: 86 HDDRLATLVRRTQTIILPVVPSPIDIRAAQRFLQELRELRHVIKTDVKLATIGNRVREGAFITNNLEDYLFGLTLPSGRKLPFLTLLRSSANYIHAAERGLSIFEFAPIATAADREYWQPLTRWLQNKRSVP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A1Z8WV61_9GAMM (CbiA domain-containing protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WV61_9GAMM) HSP 1 Score: 174 bits (441), Expect = 1.170e-52 Identity = 78/132 (59.09%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 1 HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
HD+Q+ ++ T+T ++PV+PSP+DIRAAQRF GELR++R + +++K+AT+AN+ RE S A LED L+ +LPSGRKFPFLT+LR S NY+RAA+RG+SIFEFAP+ TA DREYW PL WL+S +S P
Sbjct: 86 HDEQIVSLLSITETCIVPVIPSPMDIRAAQRFFGELRKIRKNVYNEVKIATIANKTRENSREAKNLEDLLYSFKLPSGRKFPFLTLLRQSANYIRAAQRGMSIFEFAPLTTALDREYWKPLTGWLESKKSRP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A2E6KR93_9GAMM (Chromosome partitioning protein n=2 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E6KR93_9GAMM) HSP 1 Score: 163 bits (412), Expect = 2.980e-48 Identity = 76/132 (57.58%), Postives = 106/132 (80.30%), Query Frame = 1
Query: 1 HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
D +L++ +++ Q++V+P++ SPIDIRAA+RFL EL LR I++ IK+AT+ANRVRE ++IA +LE+YL +RLP+G+K PF+TMLR+S NY+ A+E+GLSIFE AP T DRE W+PLLRWL S RS+P
Sbjct: 86 EDKRLKKYLRKAQSLVMPIIASPIDIRAAERFLNELFSLRGSINNKIKIATIANRVREDTLIAAKLENYLNNIRLPNGKKLPFMTMLRASQNYINASEQGLSIFELAPSKTYYDREQWAPLLRWLNSKRSIP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A2D7S627_9GAMM (Chromosome partitioning protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2D7S627_9GAMM) HSP 1 Score: 161 bits (408), Expect = 1.200e-47 Identity = 75/132 (56.82%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 1 HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
D +L++ +++ Q++++PVV SPIDIRAA+RFL EL + I++ IK+AT+ANRVRE ++IA +LE YL+ ++LP+G+K PF+TMLRSS NY+ A+ERGLSIFE P T DRE W+PLLRWL S RS+P
Sbjct: 86 EDKRLRKYLRKAQSLIMPVVASPIDIRAAERFLDELFSFKGSINNKIKIATIANRVREDTLIAAKLEHYLYNIKLPNGKKLPFMTMLRSSQNYINASERGLSIFELPPSKTYYDREQWAPLLRWLNSKRSIP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A382AZ66_9ZZZZ (CbiA domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382AZ66_9ZZZZ) HSP 1 Score: 160 bits (406), Expect = 2.420e-47 Identity = 76/131 (58.02%), Postives = 103/131 (78.63%), Query Frame = 1
Query: 4 DDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
D +L + +++ Q++V+P++ SPIDIRAA+RFL EL + I++ IK+ATVANRVRE ++IA +LE YL ++LP+G++ PF+TMLR+S NY+RAAERGLSIFE AP T DRE W PLLRWL S RS+P
Sbjct: 87 DKRLGKYLRKAQSLVMPIIASPIDIRAAERFLSELFSFKGTINNKIKIATVANRVREDTLIAAKLEHYLDNVKLPNGKRLPFMTMLRASQNYIRAAERGLSIFELAPSKTYYDREQWEPLLRWLNSKRSIP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A3M1DT43_9GAMM (Chromosome partitioning protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DT43_9GAMM) HSP 1 Score: 159 bits (403), Expect = 6.880e-47 Identity = 77/132 (58.33%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 1 HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
H L +++R +T+V+P++PSPIDIRAA F+ L+E R VI+H +++ATVANRVRE ++IA EL+D+L RL RK PF+ +LR+S NYLRAA RGLSIFE AP ATA DRE++ PLLRWL S RS P
Sbjct: 87 HGRDLAALLRRAETVVIPILPSPIDIRAASHFIDHLKETRRVINHQVRLATVANRVREHTLIAAELDDFLDHQRLADSRKLPFVAVLRASQNYLRAARRGLSIFEMAPAATAIDREHFRPLLRWLGSARSRP 218
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A1Y5FPA4_9GAMM (CbiA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium 53_120_T64 TaxID=1856295 RepID=A0A1Y5FPA4_9GAMM) HSP 1 Score: 159 bits (402), Expect = 1.060e-46 Identity = 74/128 (57.81%), Postives = 102/128 (79.69%), Query Frame = 1
Query: 13 LQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
L ++V+R +I++PV+PSPIDIRAA+ F+G+L LR V++ ++K+AT+ANRVRE ++ A +L+DYL ++LPSG+K P+L MLR+S NY+RAAE GLSIFEFAP T DRE W+ + RWL S RSLP
Sbjct: 90 LAKLVQRADSILIPVLPSPIDIRAAEHFIGKLNALRRVLNTEVKLATMANRVRENTLAAEDLDDYLEMIKLPSGKKVPYLAMLRASQNYIRAAEEGLSIFEFAPARTLLDRECWTRVFRWLDSQRSLP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A1G0JLD1_9GAMM (CbiA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JLD1_9GAMM) HSP 1 Score: 158 bits (399), Expect = 2.690e-46 Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 1 HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
H+ +L I + QT ++PV+PSPID+RAA+RFL EL LRN I +++ TVANRVRE +++A +LE YL +L+LP+G K PF+TMLR+S NYL AAE G++IFE AP T DRE W+PLL WL S RS+P
Sbjct: 86 HNQKLVSITRAAQTAIIPVLPSPIDMRAAERFLAELVGLRNKISRKVRITTVANRVREDTIVAAKLEHYLEKLKLPNGDKIPFMTMLRASQNYLHAAETGMTIFELAPSRTYYDREQWAPLLSWLNSSRSIP 217
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Match: A0A2E6HMD5_9GAMM (Chromosome partitioning protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E6HMD5_9GAMM) HSP 1 Score: 158 bits (399), Expect = 2.850e-46 Identity = 75/131 (57.25%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 4 DDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMATVANRVREGSVIANELEDYLFELRLPSGRKFPFLTMLRSSTNYLRAAERGLSIFEFAPIATAGDREYWSPLLRWLQSPRSLP 396
D +L++ +++ Q++V+P++ SPIDIRAA+ FL EL + ID+ IK+AT+ANRVRE ++IA +LE YL ++LP+G+K PF+TMLR+S NY+ AAERGLSIFE P T DRE W+PLLRWL S RSLP
Sbjct: 87 DKRLKKYLRKAQSLVMPIIASPIDIRAAEHFLKELFSFKGSIDNKIKIATIANRVREDTLIAAKLEHYLDNVKLPNGKKLPFMTMLRASQNYIHAAERGLSIFELPPSKTYYDREQWAPLLRWLTSKRSLP 217 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109909.2068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109909.2068.1 >prot_M-pyrifera_M_contig109909.2068.1 ID=prot_M-pyrifera_M_contig109909.2068.1|Name=mRNA_M-pyrifera_M_contig109909.2068.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp HDDQLQQIVKRTQTIVLPVVPSPIDIRAAQRFLGELRELRNVIDHDIKMAback to top mRNA from alignment at M-pyrifera_M_contig109909:3..401+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109909.2068.1 ID=mRNA_M-pyrifera_M_contig109909.2068.1|Name=mRNA_M-pyrifera_M_contig109909.2068.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=399bp|location=Sequence derived from alignment at M-pyrifera_M_contig109909:3..401+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109909:3..401+ >mRNA_M-pyrifera_M_contig109909.2068.1 ID=mRNA_M-pyrifera_M_contig109909.2068.1|Name=mRNA_M-pyrifera_M_contig109909.2068.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig109909:3..401+ (Macrocystis pyrifera P11B4 male)back to top |