mRNA_M-pyrifera_M_contig109839.2062.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A354B6B6_9ACTN (Uncharacterized protein n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B6B6_9ACTN) HSP 1 Score: 160 bits (404), Expect = 6.940e-46 Identity = 87/150 (58.00%), Postives = 107/150 (71.33%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVE----GETLVGEVLWVDRFGNCQLNIDPLELATF----GEHLMVTIGG-----DERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATLDENPNR-GVVTSVELGKRP 408
+T+LGPEI+PA L+PG+LP+S+ E G+ LV EVLWVD +GNCQLN+DPLEL + G +MVTIG DERV VR DA+D +P GR+GLVVDSSGLLS+ VAR SA+ E GL EG E+RI LD + GV SV+LG RP
Sbjct: 155 ITELGPEIDPATLLPGVLPISRFESGEHGQELVCEVLWVDHYGNCQLNVDPLELLSITDSPGGEVMVTIGAGSATPDERVGVRVDAYDQIPAGRIGLVVDSSGLLSIAVARGSAALELGLGEGIELRIRDLDPSDRGPGVSKSVQLGPRP 304
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A3M2FSR7_ACTSX (Uncharacterized protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FSR7_ACTSX) HSP 1 Score: 155 bits (392), Expect = 2.700e-44 Identity = 75/136 (55.15%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATLDENPNRGVVTSVELGKRP 408
LT LGPE++PA L+PGILPV+++EG+ LV EVLW+DRFGN QL++ P E+A GE + G + R VR AFD++P GR+G +VDSSGL+++ VAR SA+A G+ EGDEIR+ LD + GVVT V+L RP
Sbjct: 151 LTALGPELDPATLLPGILPVARMEGDELVTEVLWIDRFGNVQLDVGPDEIAGLGEEFRLRRGTESRTVVRVTAFDEIPAGRIGALVDSSGLVALAVARGSAAAVLGVTEGDEIRLVPLDADEAGGVVTPVDLSPRP 286
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A6B1AYY5_9ACTN (SAM-dependent chlorinase/fluorinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AYY5_9ACTN) HSP 1 Score: 153 bits (386), Expect = 2.150e-43 Identity = 70/135 (51.85%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATLDENPNRGVVTSVELGKR 405
L LG +I+ GL+PG+LPVSQ+EG+ LV EVLW+DRFGNCQLN+DP ++ G ++V + E++ +R +A+D +PTGR GL+VDSSGLLS+ +AR SA++EF L EGDEIR+A D G +VE+ ++
Sbjct: 152 LEQLGEDIDTTGLVPGVLPVSQIEGDELVAEVLWIDRFGNCQLNVDPADIDHLGTTMLVIMANTEKIGMRTEAYDQIPTGRAGLMVDSSGLLSLAIARGSAASEFNLAEGDEIRLAATDGQQG-GATIAVEIQRK 285
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A7K2A1V1_9ACTN (SAM-dependent chlorinase/fluorinase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A1V1_9ACTN) HSP 1 Score: 146 bits (369), Expect = 1.370e-40 Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLE---LATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATLDENPNRG----VVTSVELGKR 405
L+DLGP ++ A L PG+LPVS+ +G+ LV EVLWVDRFGNCQLN+DP E +A G L VT+G D R A RA A+ DVP GRVGLV DSSGL+S+ + + SA+ E GLHEG E+R+AT + R VVT V L R
Sbjct: 158 LSDLGPAVDVATLTPGMLPVSRRDGDDLVAEVLWVDRFGNCQLNVDPAEVDEMAATGALLQVTVGEDLRTAERARAYADVPPGRVGLVTDSSGLVSLALPQRSAADELGLHEGSEVRVATAAASDRRAGSRTVVTPVGLNPR 299
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A6B1EC47_9ACTN (SAM-dependent chlorinase/fluorinase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EC47_9ACTN) HSP 1 Score: 142 bits (359), Expect = 3.140e-39 Identity = 78/142 (54.93%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLEL---ATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATLDENPNRGVV---TSVELGKRP 408
++ LGP I+PA LMPG+LPVS EG+ LV EVLW+DRFGNCQLN+DP EL A G L V G D R A R A+ DV GRVGL+VDSSGL+S+ V R S + + GLHEG E+RI + G V T V LG+RP
Sbjct: 147 ISALGPPIDPATLMPGMLPVSGREGDDLVAEVLWIDRFGNCQLNLDPAELDELAPAGAPLQVAAGEDLRTAERVSAYADVSPGRVGLLVDSSGLVSLAVPRRSVAEDLGLHEGAEVRIGATATGGSDGAVPTATRVGLGRRP 288
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A349B680_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B680_9ACTN) HSP 1 Score: 134 bits (337), Expect = 5.160e-36 Identity = 68/138 (49.28%), Postives = 92/138 (66.67%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATLDENPNRG-VVTSVELGKRPQ 411
LT+LG ++P+ L PG++PV + E LV +VLW+DRFGNCQLN+DP ++A +G+ + + IGG R A R DAF + G VGLVVDS GLL+V + R SA E L G E+R+ LD++ G + T V LG RPQ
Sbjct: 152 LTELGDLVDPSSLTPGLIPVMREEDGDLVCDVLWIDRFGNCQLNVDPDDIADWGDRIGLRIGGQLRTARRVDAFARIKEGEVGLVVDSYGLLTVALDRRSAHVELDLGTGQEVRLQRLDDDEGAGGITTPVGLGPRPQ 289
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: UPI001AA0438C (SAM-dependent chlorinase/fluorinase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA0438C) HSP 1 Score: 130 bits (328), Expect = 1.110e-34 Identity = 62/138 (44.93%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATL---DENPNRGVVTSVELGKR 405
L +LG ++P L+PG+LPV+ +G LVGEVLW+DR+GN QLN+DP E+ +GE + + G++R A R F ++ G +GLVVDS GL+SVVV R SA+ E GL E+R+ + DE G+ T+V L ++
Sbjct: 151 LEELGEVVDPVTLLPGVLPVTHEDGAALVGEVLWIDRYGNAQLNVDPAEIEPYGERVRLRFEGEQRTARRVRTFAELAAGEIGLVVDSYGLVSVVVDRHSAAQELGLRPSTEVRLEPIPDSDEGEESGITTAVHLARK 288
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A7X7HRY2_9ACTN (SAM-dependent chlorinase/fluorinase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HRY2_9ACTN) HSP 1 Score: 130 bits (326), Expect = 2.110e-34 Identity = 64/142 (45.07%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIAT------LDENPNRGVVTSVELGKRP 408
L +LGPE++P L PG++P+++ E L+ EVLW D FGN QLN+DP E+ + GE + + G R +R A+D++ G VGLVVDS GL+S+ V R SA+ E G+ GDE++I +D P G VTSV LG +P
Sbjct: 150 LLELGPEVDPVTLTPGMIPITREEEGHLIAEVLWTDHFGNLQLNVDPAEIESLGERIELRFDGRARTGIRRTAYDEIGVGEVGLVVDSYGLMSLAVNRGSAAEELGIATGDEVKIVLGEAGDDIDPGPT-GAVTSVTLGAKP 290
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A8F4J490_9ACTN (SAM-dependent chlorinase/fluorinase n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J490_9ACTN) HSP 1 Score: 129 bits (323), Expect = 5.770e-34 Identity = 63/136 (46.32%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIATL-DENPNRGVVTSVELGKR 405
L DLG E++ AGLMP +P+++VE + L EVLW DR+GN QLN+DP E+ G+ + + GG R VR + +VPTG +GLVVDS GL+S+ V R+SA+ E L GDE+ + L D+ P G T V L ++
Sbjct: 152 LLDLGVEVDTAGLMPATIPITRVEEDVLYAEVLWTDRYGNLQLNVDPAEVEAHGDRIELRFGGKVRTGVRHHTYAEVPTGEIGLVVDSYGLISIAVDRASAAEELRLDTGDEVALVALPDDGPQPGRSTPVTLREK 287
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Match: A0A537THB9_9ACTN (SAM-dependent chlorinase/fluorinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537THB9_9ACTN) HSP 1 Score: 127 bits (320), Expect = 2.340e-33 Identity = 63/116 (54.31%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 1 LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELATFGEHLMVTIGGDERVAVRADAFDDVPTGRVGLVVDSSGLLSVVVARSSASAEFGLHEGDEIRIA 348
L LGPEI+P L+PGI+P++++E LVGEVLWVDRFGN QLN+DP E+A G+ + + R A RA +DD+ GR+GL+VDS GLLSV +AR SAS E LH GD + +A
Sbjct: 152 LDALGPEIDPVTLLPGIVPLTRIEDGALVGEVLWVDRFGNAQLNVDPEEVAAMGDVVTLRWSDKTRTAHRAGTYDDLGPGRIGLIVDSYGLLSVALARRSASDELHLHAGDAVTLA 267 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109839.2062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109839.2062.1 >prot_M-pyrifera_M_contig109839.2062.1 ID=prot_M-pyrifera_M_contig109839.2062.1|Name=mRNA_M-pyrifera_M_contig109839.2062.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp LTDLGPEIEPAGLMPGILPVSQVEGETLVGEVLWVDRFGNCQLNIDPLELback to top mRNA from alignment at M-pyrifera_M_contig109839:189..602- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109839.2062.1 ID=mRNA_M-pyrifera_M_contig109839.2062.1|Name=mRNA_M-pyrifera_M_contig109839.2062.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig109839:189..602- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109839:189..602- >mRNA_M-pyrifera_M_contig109839.2062.1 ID=mRNA_M-pyrifera_M_contig109839.2062.1|Name=mRNA_M-pyrifera_M_contig109839.2062.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig109839:189..602- (Macrocystis pyrifera P11B4 male)back to top |