mRNA_M-pyrifera_M_contig109826.2058.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: A0A2R6I1I3_9EURY (Uncharacterized protein n=1 Tax=Halobacteriales archaeon QS_4_70_19 TaxID=1919178 RepID=A0A2R6I1I3_9EURY) HSP 1 Score: 94.0 bits (232), Expect = 2.360e-19 Identity = 70/201 (34.83%), Postives = 95/201 (47.26%), Query Frame = 1
Query: 1 EPGEAK-AHKYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLALDGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
EP E + AH YRR A+ +AAL+LAC Q G TL + E +RF VS L F RI+ +L+ P++ FK+D D WDA + RL R V+D KG Y GT P + Y E+ P A++EDP L A P+ L+GHE RV +D P + + LP P +N+
Sbjct: 92 EPPERETAHHYRRWAVESAALDLACRQAGRTLGEVLDRE----YDPVRFVVSTRLGDAGFDRIERLLDLNPEVEFKLDPTDDWDAALVGRL------VATGRVRVLDLKGLYEGTDVDTTPDPDRYRLVVESFPDAVVEDPRLN----------------EATRPV---LDGHEDRVAWDYPITGVESVEALPFAPSWLNI 263
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: A0A2R6LYQ2_9EURY (Uncharacterized protein n=3 Tax=unclassified Halobacteriales TaxID=38063 RepID=A0A2R6LYQ2_9EURY) HSP 1 Score: 87.0 bits (214), Expect = 8.440e-17 Identity = 70/192 (36.46%), Postives = 92/192 (47.92%), Query Frame = 1
Query: 28 YRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLAL-DGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
YRR A +AAL+LA Q T L A++ G P +RF S L D F R+ A L+R P + FK+D GW ++RL A + V+D KG YRGT A +LY R E P A +EDP AL E L EGHE+RV++DAP D + LP P ++N+
Sbjct: 102 YRRWAFESAALDLALRQADTDL---ASALGREYDP-VRFVASTRLGDPPTFDRVRAFLDRDPTLEFKLDPTGGWSTELIDRL------ADTGQVRVLDLKGQYRGTSVDQAADPDLYERVIEGFPDATIEDP----------ALTEETRPL---------FEGHEERVSWDAPIHGVDTIESLPWEPSTLNI 264
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: A0A554NBT2_9EURY (Uncharacterized protein n=1 Tax=Haloglomus irregulare TaxID=2234134 RepID=A0A554NBT2_9EURY) HSP 1 Score: 85.9 bits (211), Expect = 2.140e-16 Identity = 69/199 (34.67%), Postives = 88/199 (44.22%), Query Frame = 1
Query: 4 PGEAKAHKYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLALDGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
P A YRR A+ +AAL+LAC Q G TL L + +RF VS L F R+ +LE PD K+D D WDA ++RL G R V+D KG Y GT P ELY E LP A++EDP L A P+ +G E RV +D P + LP P +N+
Sbjct: 94 PRRETARHYRRWAVESAALDLACKQAGRTLGDLLGRD----YDPVRFVVSTRLGDAGFDRVADLLETSPDAELKLDPTDDWDAALVDRL----ADTGAVR--VLDLKGLYEGTQVDLTPDPELYRLVVEGLPDAVVEDPRL----------------TDATRPV---FDGREDRVAWDYPITGVGSVRDLPWEPDWLNV 263
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: A0A7V8VK56_9ACTN (Uncharacterized protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V8VK56_9ACTN) HSP 1 Score: 85.9 bits (211), Expect = 2.300e-16 Identity = 75/200 (37.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query: 10 EAKAHKYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLALDGR----DFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVN 597
+A AH YRR A +AAL+LA Q G L A+ GL P L F S L G G + LER PD+ FK+D + WDA + L+ G V+D KG YRGT ELYA AEA P A +EDP L + G A EA L H +R+T+DAP S + L PR++N
Sbjct: 96 DASAH-YRRWAFESAALDLALRQAGLALH---AALGLEPRP-LSFVCSTRLSGSGDASSVGPVRDRLERYPDLRFKLDPENDWDAKLIAALQ------GLAGVDVLDLKGHYRGTPVDVDTDPELYAAVAEAFPNAWIEDPDLEHPG------AREA------------LAPHAERITWDAPLHSLADITGLETEPRAIN 266
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: UPI000677AE5D (enolase n=1 Tax=Halococcus agarilyticus TaxID=1232219 RepID=UPI000677AE5D) HSP 1 Score: 85.1 bits (209), Expect = 4.220e-16 Identity = 69/192 (35.94%), Postives = 90/192 (46.88%), Query Frame = 1
Query: 28 YRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLAL-DGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
YRR A +AAL+LA Q T L AS E+RF S L D F R++A L+R P + FK+D W +ERL A R V+D KG YRGT A +LY R E +P A +EDP AL E L +GHE+RV++DAP + + LP P +N+
Sbjct: 102 YRRWAFESAALDLALRQADTDL----ASALDREYDEVRFVASTRLGDPPTFDRVEAFLDRDPALEFKLDPTSDWSTDLIERL------ADTGRVRVLDLKGQYRGTSVDQAADPDLYERVIEGVPDATIEDP----------ALTEETRPL---------FDGHEERVSWDAPIHGVETVESLPWEPSVLNV 264
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: UPI001F3E9893 (hypothetical protein n=1 Tax=Halobacterium sp. TGN-42-S1 TaxID=2902625 RepID=UPI001F3E9893) HSP 1 Score: 84.7 bits (208), Expect = 5.870e-16 Identity = 68/199 (34.17%), Postives = 92/199 (46.23%), Query Frame = 1
Query: 4 PGEAKAHKYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLALDGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
P A YRR AAL+LA Q G TL A AS ++F S L D R++A+LER PD+ K+D W T + L+ ET A ++D KG Y GT AP LY R E P A++EDP A++ E ++ +E H RV++DAP S D + PV P +N+
Sbjct: 97 PERADFRDYRRWGFEAAALDLALRQAGETL----ADRLDASHDPVQFVASSRLPDGDTDRVEALLERYPDVELKLDPTSEWPDATFDYLR--ETGA----VRILDLKGAYEGTDVDQAPDPGLYERVFEGFPEAVVEDP----------AVSEETREV---------VEAHADRVSWDAPIHSLDDVHAQPVTPEWLNV 266
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: D8J402_HALJB (Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) TaxID=795797 RepID=D8J402_HALJB) HSP 1 Score: 84.0 bits (206), Expect = 1.080e-15 Identity = 70/193 (36.27%), Postives = 91/193 (47.15%), Query Frame = 1
Query: 25 KYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLAL-DGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
+YRR +AAL++A Q T L ASE +RF S L + F RI+ LE PD+ FK+D WD +ERL ET A VVD KG Y GT AP +LY R E L A++EDP AL S+ + LEGHE+RV++DA + LP P +N+
Sbjct: 99 QYRRWGFESAALDIALRQADTDL----ASELDREYEPVRFIASTRLGEPPTFDRIERFLENDPDLAFKLDPTSEWDEALIERLA--ETGA----VRVVDLKGQYEGTEVDQAPDPDLYERVIEGLSEAVIEDP----------ALTSDTRPV---------LEGHEERVSWDATIHGLTDVESLPWEPNWLNI 262
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: A0A0K1IVK9_HALGI (Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=34 Tax=Haloferax TaxID=2251 RepID=A0A0K1IVK9_HALGI) HSP 1 Score: 82.0 bits (201), Expect = 5.520e-15 Identity = 68/200 (34.00%), Postives = 91/200 (45.50%), Query Frame = 1
Query: 4 PGEAKAHKYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLAL-DGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
P A YRR AL +A L+LA Q GT L A++ AP LRF VS L D R++ +L+R PD FK+D W + L ++ R ++D KG Y GT AP ELY R P A++EDP A E L +GHE RV++DAP + + LP P +N+
Sbjct: 96 PERETAEHYRRWALESAGLDLALRQAGTDL---ASAVDRERAP-LRFVVSTRLGDPPSADRVEMLLDRDPDCEFKLDPTTDWHDELVSSLAAHD------RVRILDLKGQYEGTDVDQAPDPELYERILSGFPDAVVEDP----------AFTDETRPL---------FDGHEGRVSWDAPITGVESVESLPFEPSWLNI 266
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: UPI00200EBFDC (hypothetical protein n=1 Tax=Halocatena sp. DFN5 TaxID=2934937 RepID=UPI00200EBFDC) HSP 1 Score: 80.9 bits (198), Expect = 1.350e-14 Identity = 64/192 (33.33%), Postives = 87/192 (45.31%), Query Frame = 1
Query: 28 YRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLAL-DGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
YRR +AAL+LA Q GT L + E +RF S L D F RI+ +LER PD+ FK+D W A +ERL A R ++D K Y GT +LY E P A++EDP AL E L +GHE+ +++DAP D + +LP P +N+
Sbjct: 96 YRRWGFESAALDLALKQAGTNLAAVLERE----YEPVRFVASTRLGDPPTFDRIETLLERNPDVEFKLDPTSDWTAELIERL------AETGRVRILDLKSQYEGTSVDQPVDFDLYQTIVEQFPDAIIEDP----------ALTDETQPL---------FDGHEEHLSWDAPIHGIDDIKQLPFEPSVLNI 258
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Match: A0A6B9FBD9_9EURY (Uncharacterized protein n=1 Tax=Haloplanus rallus TaxID=1816183 RepID=A0A6B9FBD9_9EURY) HSP 1 Score: 79.7 bits (195), Expect = 3.760e-14 Identity = 67/201 (33.33%), Postives = 93/201 (46.27%), Query Frame = 1
Query: 1 EPGEAKAHKYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVSLAL-DGRDFGRIDAVLERVPDMCFKIDFADGWDALTLERLKTYETTAGPPRFGVVDFKGFYRGTFQGPAPRAELYARTAEALPRALLEDPWLGYDGWEGAALASEAVDLSANTPLVHALEGHEQRVTFDAPFASRDWLAKLPVLPRSVNL 600
EP A YRR AL +AAL+LA Q T L A++ G +P + F VS L D R++A+L+R PD+ K+D W A + L + V+D KG Y GT AP ELY R E P A++EDP A+ L +EG R+++DAP + + LP PR +N+
Sbjct: 92 EPERPSARHYRRWALESAALDLALRQADTDL---ASALGRERSP-VTFVVSTRLGDPPTTDRVEAILDRHPDLELKLDPTSDWTADLVADLAATDAVR------VLDLKGHYVGTTVDQAPDPELYERVIEGFPEAVIEDP----------AITEGTRSL---------VEGAADRLSWDAPITDVESVRDLPFEPRWLNV 263 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109826.2058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109826.2058.1 >prot_M-pyrifera_M_contig109826.2058.1 ID=prot_M-pyrifera_M_contig109826.2058.1|Name=mRNA_M-pyrifera_M_contig109826.2058.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp EPGEAKAHKYRRCALSTAALELACDQNGTTLELLAASEGLASAPELRFCVback to top mRNA from alignment at M-pyrifera_M_contig109826:3..602+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109826.2058.1 ID=mRNA_M-pyrifera_M_contig109826.2058.1|Name=mRNA_M-pyrifera_M_contig109826.2058.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig109826:3..602+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109826:3..602+ >mRNA_M-pyrifera_M_contig109826.2058.1 ID=mRNA_M-pyrifera_M_contig109826.2058.1|Name=mRNA_M-pyrifera_M_contig109826.2058.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig109826:3..602+ (Macrocystis pyrifera P11B4 male)back to top |