mRNA_M-pyrifera_M_contig109825.2056.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A2E7KHU6_9PLAN (Uncharacterized protein n=8 Tax=Bacteria TaxID=2 RepID=A0A2E7KHU6_9PLAN) HSP 1 Score: 230 bits (587), Expect = 2.070e-72 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPDPSETPGKKASSSTKXXKPAKAAPPTEAMLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAETEEPA 363
MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARR+EKTPDPSETPG+KASSSTK KPAKAAPPTEAMLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAETEEPA
Sbjct: 1 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRIEKTPDPSETPGQKASSSTKKKKPAKAAPPTEAMLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAETEEPA 120
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A518A7Y9_9PLAN (Biopolymer transport protein ExbD n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A7Y9_9PLAN) HSP 1 Score: 186 bits (471), Expect = 6.460e-55 Identity = 91/120 (75.83%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPDPSETPGKKASSSTKXXKPAKAAPPTEAMLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAETEEPA 363
MPIKFYCKHCGQRLSVASKKAGKKVACPAC+GRITIP ESEARR EKT + E+P KK+ +ST KP APPTE MLDADQNQFLE+LDD+GPLGESWDELLDGDW++A + E++ PA
Sbjct: 1 MPIKFYCKHCGQRLSVASKKAGKKVACPACQGRITIPAESEARRTEKTAETEESPPKKSPASTNKKKPTPKAPPTEPMLDADQNQFLEELDDLGPLGESWDELLDGDWESAVAEESDRPA 120
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A517RH47_9PLAN (Biopolymer transport protein ExbD n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RH47_9PLAN) HSP 1 Score: 132 bits (331), Expect = 6.200e-35 Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPDPSETPGKKASSSTKXXKPAKAAPPTEA--------MLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAETEEP 360
MPIKFYC CGQRLS++SKKAGK V+CPAC +ITIP++S+ARR E+T + +AAPPTEA LD DQNQ L+DLDD+GPLGESWDELLD DW+ AA+ E +P
Sbjct: 1 MPIKFYCNQCGQRLSISSKKAGKTVSCPACHKQITIPLKSQARRSEQTEN-------------------RAAPPTEADLSPQINTPLDQDQNQLLDDLDDLGPLGESWDELLDDDWEVAAAEEASQP 108
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A517VW24_9PLAN (Biopolymer transport protein ExbD n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VW24_9PLAN) HSP 1 Score: 121 bits (304), Expect = 5.470e-31 Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPDPSETPGKKASSSTKXXKPAKAAPPTEAMLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAE 348
MPIKFYC+ CGQ+LSVASKKAGK V+CPAC+ +ITIP++SE RR E + + P P P ++ ++NQ L+DLDD+GPLGESWDE+L+GDW+ AA+AE
Sbjct: 1 MPIKFYCQKCGQKLSVASKKAGKSVSCPACQRQITIPLKSEDRRTEVAENTPQAP------------PQTEKTPQATSVNQEENQLLDDLDDLGPLGESWDEILEGDWEQAAAAE 103
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A518IE29_9PLAN (Biopolymer transport protein ExbD n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IE29_9PLAN) HSP 1 Score: 118 bits (295), Expect = 1.260e-29 Identity = 67/127 (52.76%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPDPSETPGKKASSSTKXXKPAKAAPPTEA--------MLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAETEEP 360
MPIKFYC CGQ+LSVA KKAGK V+CPAC G+ITIP ES+++R P ETP APPTEA LD +QNQ L+DLDD+GPLGESWDE+L+ D A+ ET+ P
Sbjct: 1 MPIKFYCNQCGQKLSVARKKAGKSVSCPACSGQITIPFESQSQRP---PQSKETP----------------APPTEADLTPQVTAPLDQEQNQLLDDLDDLGPLGESWDEILEADSKETAAEETKPP 108
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A6CAA9_9PLAN (Phospholipid/glycerol acyltransferase n=3 Tax=Gimesia maris TaxID=122 RepID=A6CAA9_9PLAN) HSP 1 Score: 115 bits (287), Expect = 3.700e-28 Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEK------TPDPSETPGKKASSSTKXXKPAKAAPPTEAMLDADQNQFLEDLDDMGPLGESWDELLDGDWD 330
MPIKFYCK CGQRLS+ SK+AGK VACPAC+ RITIP ESE +R + +P P KK + P + LD +Q+Q L DLDD+GP+GESWDELL GDW+
Sbjct: 1 MPIKFYCKKCGQRLSITSKRAGKAVACPACRSRITIPFESEDKRTDPPTTAPAAEEPPVPPRKKHPETV-------PTPAADTPLDEEQDQLLHDLDDLGPIGESWDELLAGDWE 108
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A517VFP3_9PLAN (Biopolymer transport protein ExbD n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VFP3_9PLAN) HSP 1 Score: 110 bits (276), Expect = 1.260e-26 Identity = 66/142 (46.48%), Postives = 75/142 (52.82%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPDPSETPGKKASSSTKXXKPAKAAPPT---------------------EAMLDADQNQFLEDLDDMGPLGESWDELLDGDWDAAASAET-EEPA 363
MPIKFYCK CGQRLS+ SKKAGK VACPACK RITIP ESE + E AAPP + LD +Q+Q L DLDD+GP+GESWDELL GDW+ E+ EPA
Sbjct: 1 MPIKFYCKKCGQRLSITSKKAGKAVACPACKSRITIPFESEEKHTEPP----------------------AAPPAXXXXXXXXXXXXXXXXXXXVADTPLDQEQDQLLHDLDDLGPIGESWDELLAGDWEQETEPESFSEPA 120
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A2E8D989_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D989_9PLAN) HSP 1 Score: 68.2 bits (165), Expect = 3.980e-11 Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 1 IMPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPD 153
IMPI+F CKHCGQRLSV+S+KAG + CP CK R+TIP ES++ +E+ P+
Sbjct: 13 IMPIRFACKHCGQRLSVSSRKAGARAKCPKCKERVTIP-ESDSESVEEPPE 62
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A5C5X6H9_9PLAN (Biopolymer transport protein ExbD/TolR n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X6H9_9PLAN) HSP 1 Score: 53.1 bits (126), Expect = 7.690e-6 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPV 117
MPI F C HCGQ+LS+ +KAGK + CP C R+ +PV
Sbjct: 1 MPILFRCSHCGQKLSITRRKAGKVITCPECVHRVKVPV 38
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Match: A0A2E7D4P5_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D4P5_9PLAN) HSP 1 Score: 50.1 bits (118), Expect = 9.060e-5 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 4 MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRM 138
MPI+F C C Q +S+A+K AG+ VACP CK T+P + +++
Sbjct: 1 MPIRFRCSSCNQLISIATKMAGRDVACPTCKTACTVPQADQLQKV 45 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109825.2056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109825.2056.1 >prot_M-pyrifera_M_contig109825.2056.1 ID=prot_M-pyrifera_M_contig109825.2056.1|Name=mRNA_M-pyrifera_M_contig109825.2056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp MPIKFYCKHCGQRLSVASKKAGKKVACPACKGRITIPVESEARRMEKTPDback to top mRNA from alignment at M-pyrifera_M_contig109825:2..364- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109825.2056.1 ID=mRNA_M-pyrifera_M_contig109825.2056.1|Name=mRNA_M-pyrifera_M_contig109825.2056.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=363bp|location=Sequence derived from alignment at M-pyrifera_M_contig109825:2..364- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109825:2..364- >mRNA_M-pyrifera_M_contig109825.2056.1 ID=mRNA_M-pyrifera_M_contig109825.2056.1|Name=mRNA_M-pyrifera_M_contig109825.2056.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig109825:2..364- (Macrocystis pyrifera P11B4 male)back to top |