mRNA_M-pyrifera_M_contig109822.2052.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A3D3R3S1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R3S1_9PLAN) HSP 1 Score: 155 bits (392), Expect = 2.440e-45 Identity = 70/115 (60.87%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASAGSSQ 345
WM LGVFALS + QT ++ ++LAVD QGIIRGN+T++ +++TQ V GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVH G D T+QWLMVR+ QKD+ S+S +S+
Sbjct: 118 WMPLGVFALSPSGQTKPDSTVELAVDAQGIIRGNFTDTKTNKTQQVEGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHIGKDETQQWLMVRITQKDKDKSSSTSASE 232
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A2D5GUD8_9PLAN (Protocadherin (Fragment) n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2D5GUD8_9PLAN) HSP 1 Score: 155 bits (392), Expect = 2.810e-45 Identity = 70/115 (60.87%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASAGSSQ 345
WM LGVFALS + QT ++ ++LAVD QGIIRGN+T++ +++TQ V GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVH G D T+QWLMVR+ QKD+ S+S +S+
Sbjct: 123 WMPLGVFALSPSGQTKPDSTVELAVDAQGIIRGNFTDTKTNKTQQVEGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHIGKDETQQWLMVRITQKDKDKSSSTSASE 237
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A350KEJ2_9PLAN (Protocadherin (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KEJ2_9PLAN) HSP 1 Score: 156 bits (394), Expect = 1.220e-44 Identity = 70/115 (60.87%), Postives = 94/115 (81.74%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASAGSSQ 345
WM LGVFALS + QT +++ ++LAVD QGIIRGN+T++ +++TQ V GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVH G D T+QWLMVR+ QKD+ S+S +S+
Sbjct: 205 WMPLGVFALSPSGQTKSDSTVELAVDAQGIIRGNFTDTKTNKTQQVEGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHIGKDETQQWLMVRITQKDKDKSSSTSASE 319
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A517RD73_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RD73_9PLAN) HSP 1 Score: 160 bits (405), Expect = 3.370e-44 Identity = 71/111 (63.96%), Postives = 95/111 (85.59%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASA 333
WM LGVFALS++ QT +++V++LAV+ QGIIRGNYTN+ + +TQ V GS+DK+++RA WT+G D NT++DTGIYNLTKDE P+LVH G D+T+QWLMVRLDQKD+ +A+A
Sbjct: 466 WMPLGVFALSESGQTKSDSVVELAVNSQGIIRGNYTNTKTKKTQQVQGSIDKKSQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHVGKDQTQQWLMVRLDQKDKDKNAAA 576
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A517Q894_9PLAN (Uncharacterized protein n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q894_9PLAN) HSP 1 Score: 160 bits (404), Expect = 5.480e-44 Identity = 71/114 (62.28%), Postives = 96/114 (84.21%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASAGSS 342
WM LGVFALS + +T +N+V++LAVDK GI+RGNYT++ ++++Q + GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVH G D+TEQWLMVRL+QKD+ + +A SS
Sbjct: 477 WMPLGVFALSPSGETKSNSVVELAVDKDGILRGNYTDTKTNKSQQIQGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHIGKDKTEQWLMVRLNQKDKDSNKAATSS 590
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A517WWZ1_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WWZ1_9PLAN) HSP 1 Score: 157 bits (397), Expect = 2.940e-43 Identity = 70/104 (67.31%), Postives = 89/104 (85.58%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKD 312
WM LGVFALSQ+ QT +++V++LAV+KQGIIRGN+TN + +TQ V GSVDK+T+R WT+G+D NTI+DTG+YNLTK+E P+LVH G D T+QWLMVRLDQKD
Sbjct: 428 WMPLGVFALSQSGQTKSDSVVELAVNKQGIIRGNFTNEKTKKTQQVQGSVDKKTQRVAWTVGNDKNTIYDTGVYNLTKEEAPLLVHIGKDETQQWLMVRLDQKD 531
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A2E2BV59_9PLAN (Protocadherin n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BV59_9PLAN) HSP 1 Score: 154 bits (390), Expect = 4.200e-43 Identity = 69/104 (66.35%), Postives = 88/104 (84.62%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKD 312
WM LGVFALS + QT +++V++LAVD GIIRGNYT++ +++TQ V GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVHTG D T+QWLMVR+ QKD
Sbjct: 301 WMPLGVFALSPSGQTKSDSVVELAVDANGIIRGNYTDTKTNKTQQVQGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHTGKDETQQWLMVRITQKD 404
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A517VAV5_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517VAV5_9PLAN) HSP 1 Score: 155 bits (392), Expect = 2.830e-42 Identity = 69/115 (60.00%), Postives = 94/115 (81.74%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASAGSSQ 345
WM LGVFALS + QT +++ ++LAVD +GIIRGNYT++ +++TQ + GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVH G D T+QWLMVR+ QKD+ S+S +S+
Sbjct: 476 WMPLGVFALSPSGQTRSDSTVELAVDAKGIIRGNYTDTKTNKTQQIQGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHIGKDETQQWLMVRITQKDKDKSSSTSASE 590
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A2E7KFR7_9PLAN (Protocadherin n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KFR7_9PLAN) HSP 1 Score: 153 bits (386), Expect = 3.850e-42 Identity = 68/114 (59.65%), Postives = 92/114 (80.70%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASAGSS 342
WM LGVFALS +T ++ V++LAV+K GI+RGN+T++ + +TQ + GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVH G ++TEQWLMVRLDQKD+ S+ S+
Sbjct: 350 WMPLGVFALSPTGETKSDNVVELAVNKDGILRGNFTDTKTKKTQQIQGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHIGKEKTEQWLMVRLDQKDKNTDGSSTST 463
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Match: A0A517PKQ1_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517PKQ1_9PLAN) HSP 1 Score: 153 bits (386), Expect = 2.000e-41 Identity = 68/114 (59.65%), Postives = 92/114 (80.70%), Query Frame = 1
Query: 1 WMSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDKQTERACWTIGSDNNTIFDTGIYNLTKDETPVLVHTGDDRTEQWLMVRLDQKDQTGSASAGSS 342
WM LGVFALS +T ++ V++LAV+K GI+RGN+T++ + +TQ + GSVDK+T+RA WT+G D NT++DTGIYNLTKDE P+LVH G ++TEQWLMVRLDQKD+ S+ S+
Sbjct: 472 WMPLGVFALSPTGETKSDNVVELAVNKDGILRGNFTDTKTKKTQQIQGSVDKKTQRAAWTVGDDKNTVYDTGIYNLTKDEAPLLVHIGKEKTEQWLMVRLDQKDKNTDGSSTST 585 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109822.2052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109822.2052.1 >prot_M-pyrifera_M_contig109822.2052.1 ID=prot_M-pyrifera_M_contig109822.2052.1|Name=mRNA_M-pyrifera_M_contig109822.2052.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp MSLGVFALSQANQTSANAVIQLAVDKQGIIRGNYTNSTSSQTQVVHGSVDback to top mRNA from alignment at M-pyrifera_M_contig109822:3..350+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109822.2052.1 ID=mRNA_M-pyrifera_M_contig109822.2052.1|Name=mRNA_M-pyrifera_M_contig109822.2052.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig109822:3..350+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109822:3..350+ >mRNA_M-pyrifera_M_contig109822.2052.1 ID=mRNA_M-pyrifera_M_contig109822.2052.1|Name=mRNA_M-pyrifera_M_contig109822.2052.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig109822:3..350+ (Macrocystis pyrifera P11B4 male)back to top |