mRNA_M-pyrifera_M_contig109817.2051.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A8C5A9Z5_GADMO (Deoxycytidine kinase-like n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5A9Z5_GADMO) HSP 1 Score: 90.9 bits (224), Expect = 3.550e-20 Identity = 45/90 (50.00%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 28 SLAGNIGAGKSTLLRLLSTRL-NFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
S+ GNI AGKSTL+R+L RL ++ VVPEP+ KW ++++ D+ +D +++SQ+ G N+L Y DP RWS+TFQSYAFLSR++A +
Sbjct: 25 SIEGNIAAGKSTLVRVLGDRLEDWEVVPEPIGKWCSLQNKADDVNQD----LSSSQKSGGNILQMMYTDPRRWSYTFQSYAFLSRIRAQL 110
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: V8NYE6_OPHHA (Deoxycytidine kinase (Fragment) n=1 Tax=Ophiophagus hannah TaxID=8665 RepID=V8NYE6_OPHHA) HSP 1 Score: 87.0 bits (214), Expect = 1.470e-19 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 RSHPSSFHFSLAGNIGAGKSTLLRLLS-TRLNFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
RS S ++ GNI AGKST + +L R + VVPEPV+KW V+D+ D+ EE +T+SQ+ G NLL Y P RWSFTFQ+YA LSR++A +
Sbjct: 7 RSRSSVKKIAIEGNIAAGKSTFVNILKKAREEWEVVPEPVAKWCNVQDSHDDSEE-----LTSSQKSGGNLLQMMYEKPERWSFTFQAYACLSRIRAQV 100
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A7S0PDI2_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PDI2_CAFRO) HSP 1 Score: 88.2 bits (217), Expect = 5.430e-19 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 28 SLAGNIGAGKSTLLRLLSTR-LNFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
++ GNI AGKST LR+L+ L F VVPEP+SKW + DD E P V+ASQ+ G N+L +FY+D RW+FTFQ+YAFLSR++A +
Sbjct: 11 AIEGNIAAGKSTFLRILAEAGLGFFVVPEPLSKWQGIPADDDV----EMP-VSASQDAGMNILDKFYSDQERWAFTFQTYAFLSRLRAQL 95
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A670ZUP0_PSETE (Deoxycytidine kinase n=9 Tax=Colubroidea TaxID=34989 RepID=A0A670ZUP0_PSETE) HSP 1 Score: 86.3 bits (212), Expect = 1.800e-18 Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 RSHPSSFHFSLAGNIGAGKSTLLRLLS-TRLNFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
RS + ++ GNI AGKST + +L R + VVPEP++KW V+D+ D+ EE +TASQ+ G NLL Y P RWSFTFQ+YA LSR++A +
Sbjct: 7 RSRSTVKKIAIEGNIAAGKSTFVNILKKAREEWEVVPEPLAKWCNVQDSHDDSEE-----LTASQKSGGNLLQMMYEKPERWSFTFQAYACLSRIRAQL 100
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A5A8DUI2_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUI2_CAFRO) HSP 1 Score: 88.2 bits (217), Expect = 2.250e-18 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 28 SLAGNIGAGKSTLLRLLSTR-LNFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
++ GNI AGKST LR+L+ L F VVPEP+SKW + DD E P V+ASQ+ G N+L +FY+D RW+FTFQ+YAFLSR++A +
Sbjct: 6 AIEGNIAAGKSTFLRILAEAGLGFFVVPEPLSKWQGIPADDDV----EMP-VSASQDAGMNILDKFYSDQERWAFTFQTYAFLSRLRAQL 90
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A7J6A3F4_AMEME (dNK domain-containing protein n=3 Tax=Siluroidei TaxID=1489793 RepID=A0A7J6A3F4_AMEME) HSP 1 Score: 85.5 bits (210), Expect = 4.160e-18 Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 28 SLAGNIGAGKSTLLRLLSTRLN-FVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
S+ GNI AGKST +RLL + V+PEP+ KW V+ TD+E EE +T SQ+ G NLL Y P RWS+TFQ+YA LSRV+A +
Sbjct: 26 SIEGNIAAGKSTFVRLLERESEEWEVIPEPIGKWCNVQTTDNEFEE-----LTTSQKSGGNLLQMLYDKPSRWSYTFQTYACLSRVRAQL 110
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A7S3GKR2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GKR2_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 9.480e-18 Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 7 HPSSFHFSLAGNIGAGKSTLLRLLSTRLNFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
HP ++ GNI AGKST L++L ++FVVVPEP+++W V DEG T SQ G NLL FY +P RWS+TFQSYAF+SR++A M
Sbjct: 96 HPM-LKIAIEGNIAAGKSTFLKILEKEVDFVVVPEPLARWQNV--GADEG--------TFSQFHGGNLLDLFYKEPHRWSYTFQSYAFMSRMRAQM 180
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: H0V314_CAVPO (Deoxycytidine kinase n=23 Tax=Eutheria TaxID=9347 RepID=H0V314_CAVPO) HSP 1 Score: 84.3 bits (207), Expect = 1.080e-17 Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 28 SLAGNIGAGKSTLLRLLSTRL-NFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
S+ GNI AGKST + +L ++VVVPEPV++W V+ T DE EE +T SQ+ G N+L Y P RWSFTFQSYA LSR++A +
Sbjct: 25 SVEGNIAAGKSTFVNILKQVCEDWVVVPEPVARWCNVQSTQDEFEE-----LTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQL 109
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A6I9KJX1_CHRAS (deoxycytidine kinase n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9KJX1_CHRAS) HSP 1 Score: 84.3 bits (207), Expect = 1.110e-17 Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 28 SLAGNIGAGKSTLLRLLSTRL-NFVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
S+ GNIGAGKST + +L ++ VVPEPV++W V+ T DE EE +T SQ+ G N+L Y P RWSFTFQSYA LSR++A +
Sbjct: 25 SMEGNIGAGKSTFVNILKQICEDWEVVPEPVARWCNVQTTQDEFEE-----LTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQL 109
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Match: A0A5N5M102_PANHP (dNK domain-containing protein n=5 Tax=Characiphysae TaxID=186628 RepID=A0A5N5M102_PANHP) HSP 1 Score: 84.3 bits (207), Expect = 1.140e-17 Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 28 SLAGNIGAGKSTLLRLLSTRLN-FVVVPEPVSKWTAVEDTDDEGEEDEAPLVTASQEDGANLLARFYADPCRWSFTFQSYAFLSRVKASM 294
S+ GNI AGKST +RLL + V+PEP+ KW V+ T++E EE +T SQ+ G NLL Y P RWS+TFQ+YA LSRV+A +
Sbjct: 26 SIEGNIAAGKSTFVRLLERETEEWEVIPEPIGKWCNVQTTENEYEE-----LTTSQKSGGNLLQMLYDKPSRWSYTFQTYACLSRVRAQL 110 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109817.2051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109817.2051.1 >prot_M-pyrifera_M_contig109817.2051.1 ID=prot_M-pyrifera_M_contig109817.2051.1|Name=mRNA_M-pyrifera_M_contig109817.2051.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp RSHPSSFHFSLAGNIGAGKSTLLRLLSTRLNFVVVPEPVSKWTAVEDTDDback to top mRNA from alignment at M-pyrifera_M_contig109817:309..602+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109817.2051.1 ID=mRNA_M-pyrifera_M_contig109817.2051.1|Name=mRNA_M-pyrifera_M_contig109817.2051.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig109817:309..602+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109817:309..602+ >mRNA_M-pyrifera_M_contig109817.2051.1 ID=mRNA_M-pyrifera_M_contig109817.2051.1|Name=mRNA_M-pyrifera_M_contig109817.2051.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig109817:309..602+ (Macrocystis pyrifera P11B4 male)back to top |