mRNA_M-pyrifera_M_contig10981.2047.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10981.2047.1
Unique NamemRNA_M-pyrifera_M_contig10981.2047.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Match: D8LC34_ECTSI (Transmembrane protein 138 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC34_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.220e-61
Identity = 103/142 (72.54%), Postives = 114/142 (80.28%), Query Frame = 1 
Query:    1 SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMCEGEFRDGTILAIILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFFMTASVYGYRVTSMV-GAGCMGIWQVWDLRGYLPLSILHKLGE 423
            ++GG+S LF+VKLF MVFL  +D+ LNSSVEHET    +G  RDGT L +ILGFQLVVQ G F  LFLMMFETYPFRVGLMGMLT QYLTVY INV+YF  TA VYGYRV +MV G   MGIWQVWDLRGYLPLSI HK+GE
Sbjct:   11 TTGGDSILFRVKLFIMVFLTVVDMTLNSSVEHETFGTWDGTGRDGTALVLILGFQLVVQVGNFACLFLMMFETYPFRVGLMGMLTSQYLTVYVINVLYFVTTACVYGYRVAAMVQGEEGMGIWQVWDLRGYLPLSIFHKIGE 152
[Close]
BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Match: A0A6H5JIR8_9PHAE (Transmembrane protein 138 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR8_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 2.670e-60
Identity = 101/142 (71.13%), Postives = 113/142 (79.58%), Query Frame = 1 
Query:    1 SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMCEGEFRDGTILAIILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFFMTASVYGYRVTSMV-GAGCMGIWQVWDLRGYLPLSILHKLGE 423
            ++GG+  LF+VKLF MVFL  +D+ LNSSVEHET    +G  RDGT L +ILGFQLVVQ G F  LFLMMFETYPFRVGLMGMLT QYLTVY INV+YF  TA VYGYRV +MV G   MGIWQVWDLRGYLPLSI HK+G+
Sbjct:   11 TTGGDCILFRVKLFIMVFLTVVDMTLNSSVEHETFGTWDGTGRDGTALVLILGFQLVVQVGNFACLFLMMFETYPFRVGLMGMLTSQYLTVYIINVLYFVTTACVYGYRVAAMVQGEEGMGIWQVWDLRGYLPLSIFHKIGD 152
[Close]
BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.370e-21
Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 1 
Query:    1 SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMC--EGEFRD-GTILAIILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFFMTASVYGYRVTSMVGAG------------CMGIWQVWDLRGYLPLSILHKLGE 423
            + GG    F+ KL  ++ LM  D+ LN SVE+++      +G   D  TIL ++ G QL+VQ  +  +LF+MMF+T+PF+ GLMG++   Y  VYA+N  Y   TA +YGYR+  ++G                  W  WD   Y+  SI+HKL E
Sbjct: 1286 AKGGADAWFQAKLTVLMLLMLADVLLNGSVEYDSYSQLTLDGGGDDVDTILVLVHGVQLLVQVAVLLTLFIMMFDTWPFKAGLMGLVAVHYKWVYAVNGAYITATALLYGYRLAKLIGTSGGXXXXXXXXXXXXXAWDPWDSGAYMAFSIMHKLDE 1441
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC34_ECTSI1.220e-6172.54Transmembrane protein 138 n=1 Tax=Ectocarpus silic... [more]
A0A6H5JIR8_9PHAE2.670e-6071.13Transmembrane protein 138 n=1 Tax=Ectocarpus sp. C... [more]
A0A836CBT6_9STRA2.370e-2137.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10981contigM-pyrifera_M_contig10981:106..9271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionTransmembrane protein 138
Ec32 orthologEc-20_004270.1
Exons3
Model size474
Cds size474
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10981.2047.1prot_M-pyrifera_M_contig10981.2047.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10981 106..9271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815608.4528708-CDS-M-pyrifera_M_contig10981:105..2491622815608.4528708-CDS-M-pyrifera_M_contig10981:105..249Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10981 106..249 -
1692277485.4490907-CDS-M-pyrifera_M_contig10981:105..2491692277485.4490907-CDS-M-pyrifera_M_contig10981:105..249Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10981 106..249 -
1622815608.4647408-CDS-M-pyrifera_M_contig10981:1175..13471622815608.4647408-CDS-M-pyrifera_M_contig10981:1175..1347Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10981 1176..1347 -
1692277485.4601247-CDS-M-pyrifera_M_contig10981:1175..13471692277485.4601247-CDS-M-pyrifera_M_contig10981:1175..1347Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10981 1176..1347 -
1622815608.4745104-CDS-M-pyrifera_M_contig10981:9113..92711622815608.4745104-CDS-M-pyrifera_M_contig10981:9113..9271Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10981 9114..9271 -
1692277485.46948-CDS-M-pyrifera_M_contig10981:9113..92711692277485.46948-CDS-M-pyrifera_M_contig10981:9113..9271Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10981 9114..9271 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10981.2047.1

>prot_M-pyrifera_M_contig10981.2047.1 ID=prot_M-pyrifera_M_contig10981.2047.1|Name=mRNA_M-pyrifera_M_contig10981.2047.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMCEGEFRDGTILAI
ILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFF
MTASVYGYRVTSMVGAGCMGIWQVWDLRGYLPLSILHKLGEHGTACSVPP
PPPPPPPP
back to top

mRNA from alignment at M-pyrifera_M_contig10981:106..9271-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10981.2047.1 ID=mRNA_M-pyrifera_M_contig10981.2047.1|Name=mRNA_M-pyrifera_M_contig10981.2047.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9166bp|location=Sequence derived from alignment at M-pyrifera_M_contig10981:106..9271- (Macrocystis pyrifera P11B4 male)
AGCAGCGGAGGCGAATCGTTCTTGTTCAAGGTTAAACTCTTCGCGATGGT
GTTCCTCATGTGTCTGGACATCGGGCTGAACAGCAGCGTAGAACACGAGA
CGGTGGACATGTGCGAGGGGGAGTTCAGGGACGGCACCATCCTGGCTATA
ATCCTAGGGTGAGCAGCCCACTACGCACGGTATTAATAGTGATGTCACAA
TAAGGTTCTGGGCCTTGCTCAGATTGGGCAGTTCTTGTGGCGACGTGAAC
AACGAGAAGCGCCTTGAAGAAAACGCGCGGGGCAGTTGCTGCCATCGTGG
TAAACGTGTGTCGTCGTCGTGCTGCGTGAGCGTCTGTTTTGTCTTCAGTA
GGTTACCCCTTCTGACCAGCAATGAATGGCATGCGACTGGCGTCAAGTAG
AGGCGTAGAATTTGTGTCCAAACTGTTCAGGCAATGAGAGTCACTCTGCC
GGGCGACAACCTTATTTCTTGGCATTCTTGAGTTATTTAAGCCTTTTTGG
CTTCGCGGTGTGCTCCGTACCGCCATGAGATTCTTTGTTGATCTGCGGCG
ACAACAAAATATGTGTGTGTCCAGTTTTGAGCGAGGTACAGAGCCACTCG
TCCGGGTGGCGTTAACGCGGCAGTGAAAAGGATGGCATCACCCCTCCCCC
ACACACACCCAGGCACCTAAGAGGCAGTTACATAGTACTCCCATTGCAGT
CTCTGGAAGTGGTCACACCGGAAATTAAATTAACTCATTGAAGCTGTCAT
CCATATGCAAGTCCGCCTCACAAGTGGTCCTTACAGTAGTAGGATGCAGC
TCACCCTACATGCGACTCGCCGGACACCTCACGGCGCTTCGCGCTTGGTG
CAAGCAATGTCTATCTGGTCGGTGGAAACCCGACATGCTCCGTCCCGGCA
CTGTAGGGATGCGAGGGTCTATCGTCATACGACAACGGCCATGCATGAAA
TCGAACACATCTCTCCTATCGAGTACACCCCCCTTTCCCCCCCCCCACCC
AAAGCACCAGTCGTGCGTGAGTTCGGTGCTCGGGTATCATCAACTGTTTC
CAAGTGGAAAGGAAAGGAAAAAAGGTGGGTCCCTCTATCCTGACCAGTAG
CGACCGGCGAGGGTGTCGCCCCGGGGATAAGTGTGGAGACCGAGTCGGGC
CCACGAAGTATACATGCGGTAGTCGGGGGGGGGGGGGTGTACTCTTTATT
TTGCATGGCCGTAGTCGTATCACCATAGACCTTAAGGCACCTCTACGATG
ATAGTAGTGGAAAGGGGGGGCGGGGGGCGGGGTGTACTCATGATCATGCA
TGGTCGTAGTCGGGCGTATTTAAGAAAAACTCTGGACGAAAAGAAAGATC
CGAACGTTCGGAAATAATAGGAAATTGGGACGTAAGAAAGACAGCTCAAA
CTACTGTATCCGGCAGGCAACAAGACAAGAAACAACCAAATAAGAAACGC
CTGCGAGCGGTGCCCACCCAGTGTACGAAAAAAGAAAGGAGGACGCTCCG
GAGGGTGGCACAAAAACAAGAAACGCCGCCGCAAGTAACAACATTTGACC
TTCCACGGTTGTCACAGTCCAGAAACATTTGAGTACGAAAATGCGGGCGA
ATACTGTACTGTATTCTGATAGTCGCAGCACCAGGATCCCCCCATCCCTG
CTGCTGCCGAAATATACTAGCAAAAAATAGAAACCCCGTTGGCCGTCTCA
ATATATAGGAGAGGTGAGGTGCTGGTAGAGGCAGCGAAACAGAAGGGGGT
GACGAGGTTTGGGCGGGCGCTGACTCGAAATGTCGGCAGCTTCTACCAGT
GTTGAGCCTACCGTGCCCCATATATCCGTACAGCGTATGGCAGGCTTCAT
TAAGGTTCGAGTCACTGCTGCGGTAACTTCTCCCTCCCTACAGCTGTGAC
GCGGCAGGATTTCACCGCTATTTTTTCCAGTAGCCAACCAGCAAGTGCCG
TCAGCCAACTATTAATATTACGGGGAACCATAGTAAGTAGGACCGAATAT
TGTTATTAAAAATAGGTAAATATATAGGTTTTTATGTATACCATAGGTCC
TATTAACTATGGACCTCCGTAATAAAAACATTCGACTGTAGTCGGCAAGT
CGGGTGGAGAGGCCAGGTATTGGCCAGCCGACTTGCCGACTCCCGCAAAA
AATAAAATAAAATAATCCTTCCGACAAGTAGGGAAACCCAATTCGTCAGA
AAACTGGCGCTTTCGCGAAGCACGGCCAACTGCTGCTCCTGCTGTAGTCC
GACTAGTATGAGCTACGTCTTGCCGACTCACAGCTCTCAAGACAGCCGAC
TCGATTTTGACAAATCGAGATTTCTCGAGCTCCGCCGTGGTGGGTGCGTG
AGCTCTTTCCGTGCGCTTCGCGAACAAGAAGATCTCTCGCTTGAGCGCGT
GCTCTGCCTTTTTGGTGAGAAGGGGTCGTCTACTACTCTGTACCCCTGAC
TGAGTAGAGCGGTAGTTTAATCCCTTAGATTCAATATAATGCATGTCTTG
TGGGTTCGACTCAGGCTCGTCTCTAGGTACCTGGTACACAGCAACAGGTA
TACTGCAGTGAGCTTCAACGCTGGCCCCTCAAAAGCAACACTCCCCCCGG
ACAGAAACAAAAAAAAAAGAGTGGGCAACGGAAAAAAAAAAACAAGGAAA
CGTATATATCAAGTATGCACGAAGTTTAACTCCTTTCTGTACCTACTTAA
TGTGCTTCCGACTTAACGTCCAGCTCCTGCACAGCAGCCAGCAATACTCC
ACTTGAGGCCCTTGCCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTCTCT
CCACCTGATTTCCTGTACCGTCTACACGTGGCGGTTCTCATTGAAGCATG
CCCGTGATGTATCATACCTGGTGAGTTGCCGTTTTTTCTGAACGTCATGG
AAACTACGGAAGGATCCACCTGAAAAACATGGTACACACTTTCAAGCAAG
AGGAAGCGCCAGAAGCCCTCCGGTCCCGGGGGAGTGCTGATCAAAGGGAT
TGCAACCCTTGAGCAAATCCGAGGTCCCCGCTTAACAGTCAGTGGATCCC
GAATTTTGCTTTTAATATAGATACACCCTAACCCCTAAGCTACCAGTCAG
CGCCGACCCACGGAACAGTCCCCGGAAAAATCCCCGGAACAGTCCCCGGA
ACAATCCCCGGAACGATCCCCGGAACATTCCTCGGAAAAGTCCCCTGGGT
AGGGCTGTAGGGCTGGAAGTTGTGTGTGGCGGAGAAAACTGAAGCGAGTC
GAGTAACTGGTCATTCTTTTTGTGTTTTCCCTAAATAAGAAAAGAACATT
AAAACCGAGCCACAAGCAAGCGCGCCGCAGCCAGATGCACAAACGCAGAA
TTCGGTAAAAAATTCCGCACGCAACTATTAATAGCTATGTATACTACGGT
GGCCGGCGATTAGCTGTCAGCCACCCCACAACCTTGCTGGCTATGGAACC
TACCTAGCCAACCAACTCCTCGTCGGCGACTTATATCGAGTCAAACTCAG
AGCCCTACTTATCATGGAACCTACCTACGCAGCCAATGACCACAGCAGTA
GTTGGCGACTTACATTTATCCAACTCAAAGTCCTCTATGCCGATCATGGA
ACCTACCTCGCCAACCAATAACTAGTCGGCGACTTACAGTCACAACCCTA
CAAATCATGGAACCTACCTAGAAAGTATAAAAATATCTAGCGGGCGACTT
ACATTCAGCCAGCTCACAGCCCTACTATAAATAATCCTGAAACCTACCTC
GCCAACCAGTGGCTTGTCGGCGACTTACATTCTGCAAACACGCTGCCTTT
CCAGGGTACTACTGCTGTACTCATGGAACCTACTTAGGCAACCAAATAAC
TAGTCGCCGACTCTTAGTCAGCCAATTCACAGCCCTACCCCTGGGGCTGT
AAAATATAGAAGAATATCGTGAGGAACATTCTGAGGAACATTCTTACCGA
GCTATGAAGGGGTAAAATAGAACATTCATGTTTTTTTTACAGGAGACGGT
AAAATAACGTGGTCATCATCAATCAGCCGCGCCGACGCCCTAAAGCCCAC
TATTACGAAGGGCCATAGTAAATAGGACCTACGGTACACACAAAAATCTA
TATATTCTCCTGTTTTTACCAACAATATTTGGTTCTATTTACCATGGTCC
CCCGTAGTAACCACGACCACTTCTTACCCATTACAACAACAGGCTGAATT
GCTCGAGGGTTTTCAGCCGCCCGCTCGATCGCTAGAACAGCAGCCGCTAC
TATCATACGAGAAACAACAGCAGTAGTTAGGTATTAATTTAATACCTGGT
ACTTTTTTTGCACTGCAGAAGCCGCAGTTGTAATCAAATAGTTATCGTAT
GTGAACTCGGACTCTGGGGGCTTCTACCTAGTCGGTCACTTTTATGAAGT
AGTCGATGCCGAACAGCTTCAAAGAAAAGTGTGGACTGTGAACAATGCTG
CCACTGCACCTTTCAAGTGGTACATCCACTTGTGGGACAAGATTTCGAGC
GAAGCGACAGAAACACGGCGGATTGGCCTGCTTTTTCCATCAATATTTCG
GGTTGTATGTTTACTGCAAACACGCTCCTTTCGACGTGTCTTCTGTCTTC
GTTTTTCTATTCCGTGTTTCTTGGTCATTTTTCGCGTTTGACGCCATTGT
GCAATTGAAACGCTCTACGCTGCCGGATGACCCACACAATCAATCATAAC
AGTTTGTAAGAGATCAATGTTGAAGCTGGTGCTATGTTAGTACGCATTAT
CGAAGGGCAAACACGATAGTACGGTACGAGGACAAACACAATAGTACGGT
GCGAGTATTTGTGGTGGGAGGGGAGTGGTGGTGTTTTGGTGGATGAGATG
GAGGGATGCTGGTTGTGTTCGTAGCCTGCATGAGCGTCACGTGAGTTTTG
ATTTATTTGTCGTATGATACAGATACTGCCGCTCTTTTGTTCTGGAGAGT
TCTTCACGTTCCGCTTGTCCTTTTTAGAGCAACACTACACATTGTCCTAT
GGCAAGCACAACAACAACCAATAGTAGTCGACACCCAAACCGTTTCCTTA
TAGCTACTTCCGGAAAGGATGTGGGAAACGGACTAAAACGTAAGGAGAAA
AGCCTGCCAGGTGGGGGGATGGACATGGTGTAAGGCTAAGATTGGGCAGG
CCGATTGGTTAACCTTTTACCAGTTGCCCCAACGGACTAAGAGCCGAGCA
AATGGCGTCTATCGGCAGCACATCGTGAGGGTCGTTGGGTCGTCAGTTCG
AACCTCACGTCCACCATGAAAACGATTTTTAAGAAAGGAGAAATTCGTCG
TGTCACTGTCAAGAATCTCATAAGACATTCTCTCTTTAGATTGTTAGGAA
CTGCGGACTATTGCGGGGGACCGTAGTAAACAGGACCTACGGTAAACACA
AAAACCTATGTACTTCCATATTTTTGATAACAATATTTGGTCCTGTTTAC
TATGGCCCCCGGTAATAGGCACGTACGACCCCACACGAAGACCAAGGACC
TCGCTGTTCCGAAGCGGGAAATAGTGTTGTAAGGCTTAGATTGGGTAGGT
AGTTACTAGTTGAGCTTTTTTACCAATAGCCCAATGGACTACAACCGTAC
CAGATAGATACGGGATGCGGGACATAAAAATGAATCCGCCGCGCTTCGCC
AAATTTAGTCCCTAGCCGCAGTACTACGTAGTGACAGCTGCTGTCGTTGT
CATGTGCACCACGTCATGAACTGGCAGCCGGTTCATAATAAGCTATCGCG
AGGGGGGTTGACCACACTCGCCGGCCCAGTGGGGGGTCCGAATGCTGCGT
GCAGCAGCAGCAGCCTCTCAACACCTCGGCGTTGCTGAGCACTTTTCCCC
CCCGCAGTAAATCCGTCGATGCGCCGAGCAAATCGCTACTTTGTTTGCTC
TTTCTCGACAGAACCTACAATTACATTTATTTTTGAATGGAGCACGACAC
CGCTGTGAATGGGGGGCGAGCTACGATAGGGCTTAGGGGTAGAACTTTTG
GCCTTCCCAGGCAAATATTTCTGACCGACCGGGCTCCTAAAACCAAAATC
GTTGCAATCGTGATTATTTTTTTACGCTACTCTTCGTATAATAGTATAGC
TACTATTCGACAGTGCTTCGAATTGCCGGTCGGGTTGCCTTATTGGCTTC
TCCTCAACATCAGCTTTTTGGATGAGGTATAGACCGGCTATACGCACCAT
GATGGAGTGAGTATCGTAGCACCGATCGTAGGTTTTTCTTCCGGTTCTCG
TTTCCCTTGATTTAGTTTTTCCTTTCGATGATGGTGATCACGAAGATGAT
TATGGCGATAACGATTATGATGTTGATGATTATGACACCCTCATATGTTA
GGCTAAGATCGTGACTCCCCCTGACGTTAGGCCGAGATCGTGACTCCCCC
TGATGTTGGGCTAAGATCGTGGCTCCCCCTGATGTTAGGCTAAGATTGTG
ATTCCCCCTGATGTTAGGCTAAGACGATGACACCCTCAGATGTTGGGCGA
CCCTCCTTATCATGGCGGTACGTGTCTTGCAATTTCCTACACGAAGACGA
TCTACTATTAAATATTGATAGATACTGATCTGTCCAACATATGAAGGTCT
CACCGTTTTTTTTTTTTTTTTTACGGTACGTACGTACATTTCACGAAAAA
AAAGGAAAAGGGGGGAAAGAAAAAAACACCTCAGTTAGGCGTAGTGAGAT
CGAGGAATTCGTCGAAACTTTGCAAGCAGTTCGACGCGAGTCCTTAAGGG
AAGAAAGGGCCGAACTGCTGCAGTTTCGCGATAAAAATGCGAGGCACCAG
CCGTGGTAGGGAGGATCTGAGTTACGAGTACTATAAACATTAGGAAGGAG
GGGGAAACGAAGGGCGAAGAGAAGACATAGGGTGGACGGAAACCAAAAAC
AAAAAACGAAACAAAAGCTGAGTGTGATTCTTCACTTCGATCATCAAGCG
CGCTGCAGTGTTTATACGTACGACCTCATGCAGGATACACATGCATATAT
GGCATGTTGATAAATGACACCTCGTTCAGATTTGACCGGCGCAACGTCGG
ATAAGAGTCAGTAGAGCCACTCACAAGGGGGGACTGCATTGCTGGGAACA
AGAATTTTGTCACGTGGTTTTGACTACAGTCGTTGGATTTTTACGGTAGG
TTACCCTTTGTATGTGGATGGTATGATTGGAACAAGCGCTACACATTTCT
TGTCACAGAAGGCGGATGAAACAATAATGCCGTAAATGGCGTTGAGTTCG
CACAGAAGCGCGCGATCGTGTTTTCAGCGCTAATTGACGGTTCCGTTGAC
GAGGGCAGGGGTGCTAAAGCCGAGCATTAATATTTTCGGAAGACTCTCTC
TCTCTCGACCGGATATTTTCCGAAAACGCCTCCTTTTCGTCCGGCATTGT
GTTAAGGTCTTAGTCCGTTGGGCTACTGGGAAAAAAGGTTAACCGATCGC
CTACCCAATGTAAGCCTTACAAACGATTGGCAAGAACCTTAATCCCGTTC
AGGAAAAATCGAGGGGCTTAAAAAACGATTGCTGTCCCTCCCTTAAGGTG
TAGATGGTGCACAACCACTGCCCGCCCTGGGCGATACCTGGCATACAGTA
CAAAACCCCAAGTAGGAAAAATGAGCGATGAGAAAGACAGGTAGGTGAAG
GTTCACAGCAAAGCGCGAATCTCGGGAGTCATTTACACTTAATTTTCTTG
CAGAACGCACCAATTCTGAAACAGGAAACCCAGCCTGGACCCGATTCCCT
GTATATTATTTTGCTGTCCTGTGCTTCTATGTAGCAACTCGAAGGCATGC
ATATATAGCACCTACCAGGTATCTATAAGCGTTGCTTTCCTCGTCGGAGC
GGCGGGGGCTCGACAAAAAAAAACGCCTCACACCACTACGTACAACTCCA
CCGCGCCTCTTTCCGTACGAGCAGGTTTCAGCTGGTGGTGCAGGGGGGAA
TTTTCGGCAGCCTTTTCCTGATGATGTTCGAGACGTACCCCTTCCGAGTG
GGCCTGATGGGCATGCTCACCAAGCAATACCTCACGGTGTACGCCATCAA
CGTTGTCTACTTCTTCATGACGGCTTCGGTCTACGGCTACCGTGTCGTAA
GGACGATAAATAAAATCATCGCGTTGAGAACTTTATACATAAGGCTCTTT
TTTGGGTTTCCGAGGCTTCTTTTTTCGGAGTGCTTCTGAGTGATCAACGT
TGACGCTATTGCTGCACACATTTGTCACCTTGGCAAAAACGGTACTATTA
CGGGGAACCATAGTTAATAGGACCAAATATTGTGAGCAAAAATAGGTAAA
TATATAGGTTTTTAAGTGTACCATAGGTTCTATTAACTATGGACCCCCGT
AATATTAACAATAACTTTTGCATCAACAAATCTCAGCATAAGAAATACCA
GGTATTGTACTAAGAAATCGCGATAATTTATTACACTAAGAAGAAATCAG
CTACGTGGAAGCAAGGGGGCAGGCTGGATTTCGCGGCTCTCGGTAGCGGC
ACCCCGTCATGCCCTTCGTACAAATCCGGCTTGAGGCTACTATTTTTCAC
GGGTGATGATGTACCACGCTCTGGAAGCAAACACAAGGGCCGCTTGGCCT
TCGTGGAAGTTAGTAGAGGTTGATAGAGGTTAACCGAGGTAAGAGTAGCT
AGAGCAACAAGTTATTGCGGGGGACCATATTTAATAGGACCTACGGTACA
CACAAAAACCTATGTATACGTTACCTGTCTTTACTAACAATATTTGGTCC
CATTTACTATGGCCCCCCGTAATAGGGCCGTTCCTTCTACTACCACGCAG
CACGTACCTGGTACGGCAAAACATCGGACCTTAACTTTCGTCTCCACGAA
AAAAAAAGAAAAAGACGACGACGACAAGGACGCTGAGTTAAAATCAACAC
ACTGCCGCTGTCCTTTTGTGTGCAGGTCACATCATCAGCGTCTATCTGTA
AATATTATTTTTTGCTCCTCGGCGTTTCCTTGCATGCATGCTCCGCGCGC
GTGTGTGTGTTTTTGTGGGCAGACATCCATGGTGGGAGCCGGCTGCATGG
GGATCTGGCAAGTGTGGGACTTGCGCGGCTACTTGCCTCTCTCCATCCTC
CACAAGCTAGGTGAGCACGGGACCGCTTGCAGCGTCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig10981:106..9271-

>mRNA_M-pyrifera_M_contig10981.2047.1 ID=mRNA_M-pyrifera_M_contig10981.2047.1|Name=mRNA_M-pyrifera_M_contig10981.2047.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig10981:106..9271- (Macrocystis pyrifera P11B4 male)
AGCAGCGGAGGCGAATCGTTCTTGTTCAAGGTTAAACTCTTCGCGATGGT
GTTCCTCATGTGTCTGGACATCGGGCTGAACAGCAGCGTAGAACACGAGA
CGGTGGACATGTGCGAGGGGGAGTTCAGGGACGGCACCATCCTGGCTATA
ATCCTAGGAGCAGCGGAGGCGAATCGTTCTTGTTCAAGGTTAAACTCTTC
GCGATGGTGTTCCTCATGTGTCTGGACATCGGGCTGAACAGCAGCGTAGA
ACACGAGACGGTGGACATGTGCGAGGGGGAGTTCAGGGACGGCACCATCC
TGGCTATAATCCTAGGGTTTCAGCTGGTGGTGCAGGGGGGAATTTTCGGC
AGCCTTTTCCTGATGATGTTCGAGACGTACCCCTTCCGAGTGGGCCTGAT
GGGCATGCTCACCAAGCAATACCTCACGGTGTACGCCATCAACGTTGTCT
ACTTCTTCATGACGGCTTCGGTCTACGGCTACCGTGTCGTTTCAGCTGGT
GGTGCAGGGGGGAATTTTCGGCAGCCTTTTCCTGATGATGTTCGAGACGT
ACCCCTTCCGAGTGGGCCTGATGGGCATGCTCACCAAGCAATACCTCACG
GTGTACGCCATCAACGTTGTCTACTTCTTCATGACGGCTTCGGTCTACGG
CTACCGTGTCACATCCATGGTGGGAGCCGGCTGCATGGGGATCTGGCAAG
TGTGGGACTTGCGCGGCTACTTGCCTCTCTCCATCCTCCACAAGCTAGGT
GAGCACGGGACCGCTTGCAGCGTCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCACATCCATGGTGGGAGCCGGCTGCATGGGGATCTGGCAAGTGTGGG
ACTTGCGCGGCTACTTGCCTCTCTCCATCCTCCACAAGCTAGGTGAGCAC
GGGACCGCTTGCAGCGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
back to top