mRNA_M-pyrifera_M_contig109782.2040.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.550e-31 Identity = 62/138 (44.93%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 4 QVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWT-VDGRALKSSR 414
Q + H+ D CLA P G VATG + +RPT++VW DTG + TL GFH RA+T ++F L ++G DD+HS+A+YDW +L RA +KG R K LDVAW+ A G ++ G+RH W GR L SR
Sbjct: 1131 QNFQLGHSGDATCLAALPDGLLVATGDVSRRPTIIVWKPDTGEAVKTLSGFHRRAITALSFSRDGRHLASLGCDDDHSLAIYDWENSLLRATAKGGRRKALDVAWNSA---GTRLVTCGLRHVSFWNFAGGRNLLHSR 1265
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: UPI001E1D42AF (LOW QUALITY PROTEIN: echinoderm microtubule-associated protein-like 6 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D42AF) HSP 1 Score: 124 bits (312), Expect = 3.030e-30 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 4 QVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVDGRALKSSR 414
Q + EHT DI+CL++HP +ATGQ+G+ P+V VWDA+T ++S L G H R V V F L +VGLDDNHS+ V+DWR+ A ++G + K+ V W+P + ++ VGV+H + WT G SSR
Sbjct: 717 QRFYLEHTDDILCLSIHPLKDLIATGQVGRDPSVHVWDAETLKSVSVLKGHHERGVCAVDFSGDGKKLVSVGLDDNHSIVVWDWRKGEKLATTRGHKDKIFVVKWNPFDAN--KLITVGVKHIKFWTQAGGGFTSSR 851
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: C1N8S3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8S3_MICPC) HSP 1 Score: 123 bits (309), Expect = 7.500e-30 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 4 QVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVDG 393
Q + HT DIVCLA+HP +ATGQ+GK PT+ VW++ T LS + GFH RAVT ++F A L +VG+DD+HS+AVYDW ANS+GD +V + ++P ++ GV+H + W ++G
Sbjct: 56 QQFFTTHTDDIVCLAMHPEREIIATGQVGKEPTICVWNSVTCELLSEIKGFHQRAVTSLSFDATGRFLASVGMDDDHSIAVYDWASRRMLANSRGDERRVFNCEYNPYDGR---LVTGGVKHLKFWVMEG 182
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: A0A7S0GMR8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GMR8_MICPS) HSP 1 Score: 123 bits (309), Expect = 7.520e-30 Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 AQVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVDGRALKSSR 414
AQ + HT D++C+A+HP G VATGQ G+ P++ VW + T L+ L GFH R V ++F L +VGLDD+HSVAVYDW+ ANSKGD ++ +V ++P ++ GV+H + W ++G L R
Sbjct: 163 AQQFFTAHTDDVLCMAMHPDGEIVATGQAGRDPSICVWSSTTCELLAELKGFHRRGVVSLSFDGTGRFLSSVGLDDDHSVAVYDWQSKRMLANSKGDANRIFNVEYNPHDGR---IVTGGVKHVKFWVMEGGYLVGRR 297
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: UPI0003F06F4F (echinoderm microtubule-associated protein-like 6-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06F4F) HSP 1 Score: 122 bits (307), Expect = 1.380e-29 Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 AQVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVDGRALKSSR 414
+Q + EHT DI+CL +HP VATGQ+G+ PT+ VWD + TLS L G H R V V F L +VGLDDNH++ ++DW++ A ++G + K+ + W+P + ++ VGV+H + WTV G L S R
Sbjct: 455 SQRFYLEHTDDILCLCIHPLKDIVATGQVGRDPTIHVWDVNDLKTLSILKGEHQRGVCAVDFSGDGKKLASVGLDDNHTIVIWDWKKGAKLATTRGHKDKIYVIKWNPHAED--KLVTVGVKHIKFWTVAGGGLTSKR 590
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: A0A1Y5IE28_OSTTA (Uncharacterized protein n=3 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IE28_OSTTA) HSP 1 Score: 122 bits (306), Expect = 1.940e-29 Identity = 60/123 (48.78%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 22 HTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVD 390
H DI+CLAVHP VATGQ G+ P V VW T L+ L GFH RAVT ++F A L TVGLDD HS+AVYDW ANSKGD ++ D A++P ++ VG RH + W V+
Sbjct: 192 HGDDILCLAVHPDLDIVATGQAGRDPVVCVWSTRTREVLAELRGFHQRAVTSLSFDATGKFLATVGLDDEHSIAVYDWENKKVLANSKGDTKRIFDCAYNPHDGR---IVTVGERHIKFWIVE 311
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: K1QFE3_CRAGI (Echinoderm microtubule-associated protein-like 6 n=5 Tax=Crassostrea TaxID=6564 RepID=K1QFE3_CRAGI) HSP 1 Score: 122 bits (305), Expect = 2.650e-29 Identity = 58/138 (42.03%), Postives = 82/138 (59.42%), Query Frame = 1
Query: 1 AQVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVDGRALKSSR 414
+Q + EHT DI+CL +HP VATGQ+G+ P V VWDA+T T S L G H R V V F L +VGLDDNH + V+DWR+ A ++G + K+ + W+P ++ ++ VGV+H + WT G S+R
Sbjct: 713 SQKFYTEHTDDILCLCIHPIKDLVATGQVGRDPAVHVWDAETLKTASILKGQHQRGVCAVDFSGDGKKLASVGLDDNHCIVVWDWRKGEKLATTRGHKDKIFVIKWNPFEAN--KLITVGVKHIKFWTQAGGGFTSTR 848
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA) HSP 1 Score: 121 bits (304), Expect = 3.410e-29 Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 1 AQVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWD-ADTGATLST---LDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVDGRALKSSR 414
+Q +N +HT DI+ +AVHP GRFVATG++G++P +V+WD ADT + + G RAV +AF L VG DD+H+VAVYDWR + +KGD+ K L +A+SP G V+Q GV+H + GR +++ +
Sbjct: 333 SQRFNMDHTDDIIAVAVHPEGRFVATGEMGRKPKIVIWDSADTTGVMDAVRIIQGHATRAVIQLAFSPDGRKLAAVGQDDDHTVAVYDWRSRKMKMQAKGDKNKTLALAFSP---NGHSVVQCGVKHVKFHNFKGRNVQTKK 471
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: A4S9K3_OSTLU (HELP domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9K3_OSTLU) HSP 1 Score: 121 bits (303), Expect = 3.660e-29 Identity = 55/123 (44.72%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 22 HTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVD 390
H+ DI+CLA+HP G ATGQ G+ P V VW T L+ L GFH RAVT ++F A L TVGLDD HS+AVYDW ANSKGD ++ + ++P ++ VG +H + W ++
Sbjct: 104 HSDDILCLAMHPDGEIAATGQAGRDPVVCVWSTKTNRVLAELRGFHQRAVTSLSFDATGKFLVTVGLDDEHSIAVYDWENKKVLANSKGDTKRIFNCKYNPHDGR---IVTVGEQHVKFWVME 223
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Match: A0A812T9P4_9DINO (EML6 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812T9P4_9DINO) HSP 1 Score: 121 bits (303), Expect = 4.610e-29 Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 4 QVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDGFHARAVTHVAFHAHSDLLFTVGLDDNHSVAVYDWRRALHRANSKGDRGKVLDVAWSPAKSEGAPVLQVGVRHARLWTVDGR 396
Q + Q HT D++ LAVHP+GR+VATG+ G P ++VWD T L L G H RAVTH+AF L +VG D +H+V VYDW S GD+ K LD+A S + G + QVG+ H R T+ GR
Sbjct: 460 QRFFQGHTDDVIALAVHPAGRYVATGEKGPTPKIIVWDTHTLEPLRVLKGAHQRAVTHLAFSRSGTYLASVGADKDHTVVVYDWAAGNWITKSAGDKNKCLDMAISDS---GRLIAQVGINHVRFHTLQGR 587 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109782.2040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109782.2040.1 >prot_M-pyrifera_M_contig109782.2040.1 ID=prot_M-pyrifera_M_contig109782.2040.1|Name=mRNA_M-pyrifera_M_contig109782.2040.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp AQVYNQEHTADIVCLAVHPSGRFVATGQLGKRPTVVVWDADTGATLSTLDback to top mRNA from alignment at M-pyrifera_M_contig109782:154..597- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109782.2040.1 ID=mRNA_M-pyrifera_M_contig109782.2040.1|Name=mRNA_M-pyrifera_M_contig109782.2040.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig109782:154..597- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109782:154..597- >mRNA_M-pyrifera_M_contig109782.2040.1 ID=mRNA_M-pyrifera_M_contig109782.2040.1|Name=mRNA_M-pyrifera_M_contig109782.2040.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig109782:154..597- (Macrocystis pyrifera P11B4 male)back to top |