mRNA_M-pyrifera_M_contig109765.2034.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A484DW69_BRELC (U1-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DW69_BRELC) HSP 1 Score: 193 bits (490), Expect = 2.130e-56 Identity = 96/169 (56.80%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV N V + R G V F T EE +++FQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FS++GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+L RR+E AGAHAIGVH+R +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVRNDVINTVDFVSRSGDSVVFRTCPEESSKVIFQIGTADAVLALKAAEAVARDVSAIDINMGCPKHFSIQGGMGAALLQKPEVACDIMKTLRRNLNIPLSCKIRLLPEIQDTVDLARRLEDAGAHAIGVHMRQI 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A6A3TA19_9STRA (U1-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TA19_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.960e-56 Identity = 96/169 (56.80%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV N V + R G V F T AEE G++VFQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FS++GGMGAALL KPEVA DII+TLRRN+S+P+SCK+R + +++ T++ +R+E AGA+A+GVH+R +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNAVDFVSRNGDSVVFRTCAEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSIQGGMGAALLRKPEVACDIIKTLRRNLSIPVSCKIRFLPEIQDTIDTAKRLEDAGAYAVGVHMRQI 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: W2G1E1_PHYPR (U1-type domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2G1E1_PHYPR) HSP 1 Score: 192 bits (488), Expect = 5.210e-56 Identity = 96/169 (56.80%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV N V + R G V F T EE G++VFQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+L +R+E AGA+A+GVH+R +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNAVDFVSRNGDSVVFRTCPEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDLAKRLEDAGAYAVGVHMRQI 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: D0P0N4_PHYIT (tRNA-dihydrouridine synthase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P0N4_PHYIT) HSP 1 Score: 192 bits (487), Expect = 7.030e-56 Identity = 98/167 (58.68%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLR 498
VR+G+LP+RLLSL GAD VY EII ++ RV N V + R G V F T +EE G++VFQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+L RR+E AGA A+GVH+R
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIIDKRIISAVRVPNDVVNAVDFVSRNGDSVVFRTCSEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDLARRLEDAGACAVGVHMR 181
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: H3GYM5_PHYRM (U1-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYM5_PHYRM) HSP 1 Score: 191 bits (485), Expect = 2.230e-55 Identity = 95/169 (56.21%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ R++N V + R G V F T EE G++VFQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DII+TLRRN+++P+SCK+R + +++ T++ RR+E AGA+A+GVH+R +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRMKNEVINSVDFVSRNGDSVVFRTCPEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLPEIQDTIDTARRLEDAGAYAVGVHMRQI 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A5D6YC71_9STRA (Dus domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC71_9STRA) HSP 1 Score: 186 bits (471), Expect = 4.230e-55 Identity = 95/169 (56.21%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYWRKGGG-VEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV NA V Y K GG V F T EE+ ++VFQ+GT AV+ALKAAE +A DV A D+NMGCPK FS++GGMGAALL PEVA DI++TLRRN+++P+SCK+R + D K+T+++ +R+E AGA AIG+H R V
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIIATNRVPNALLDTVDYVSKNGGAVVFRTCEEEKRKVVFQIGTADAVLALKAAETVAGDVAAVDINMGCPKHFSIQGGMGAALLKTPEVACDILKTLRRNLNIPVSCKIRILEDTKATIDIAKRLEHAGAVAIGLHGRQV 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A225WUV3_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUV3_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.850e-55 Identity = 95/169 (56.21%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV N V + R G V F T EE G++VFQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+ +R+E AGA+A+GVH+R +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNSVDFVSRNGDSVVFRTCPEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDAAKRLENAGAYAVGVHMRQI 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A2P4WWN1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWN1_9STRA) HSP 1 Score: 190 bits (482), Expect = 5.370e-55 Identity = 95/169 (56.21%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV N V + R G V F T EE G++VFQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+ +R+E AGA+A+GVH+R +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNSVDFVSRNGDSVVFRTCPEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDTAKRLEDAGAYAVGVHMRQI 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: G5AD05_PHYSP (U1-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AD05_PHYSP) HSP 1 Score: 189 bits (481), Expect = 9.030e-55 Identity = 96/169 (56.80%), Postives = 126/169 (74.56%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV N V + R G V F T EE G++VFQ+GT AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DII+TLRRN+++P+SCK+R + +++ T++ +R+E AGA A+GVHLR +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNDVVNAVDFVSRNGDSVVFRTCPEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLPEIQDTIDTAKRLEDAGACAVGVHLRQI 183
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A3R7JYU6_9STRA (U1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JYU6_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.320e-54 Identity = 95/169 (56.21%), Postives = 126/169 (74.56%), Query Frame = 1
Query: 1 VRAGSLPMRLLSLEMGADTVYSPEIIA*KVPKLERVENAATGCVAYW-RKGGGVEFSTHAEERGRLVFQMGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 504
VR+G+LP+RLLSL GAD VY EI+ ++ RV NA V + R G V F T EE G++VFQ+GT AV+ALKAAE +ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DII+TLRRN+++P+SCK+R + + + T++ RR++ AGA+A+GVH+R +
Sbjct: 15 VRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNAVLDTVDFVSRNGDSVVFRTCPEETGKVVFQIGTADAVLALKAAEQVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLSETQDTIDTARRLQDAGAYAVGVHMRQI 183 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109765.2034.1 >prot_M-pyrifera_M_contig109765.2034.1 ID=prot_M-pyrifera_M_contig109765.2034.1|Name=mRNA_M-pyrifera_M_contig109765.2034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAback to top mRNA from alignment at M-pyrifera_M_contig109765:8..603- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109765.2034.1 ID=mRNA_M-pyrifera_M_contig109765.2034.1|Name=mRNA_M-pyrifera_M_contig109765.2034.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=596bp|location=Sequence derived from alignment at M-pyrifera_M_contig109765:8..603- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109765:8..603- >mRNA_M-pyrifera_M_contig109765.2034.1 ID=mRNA_M-pyrifera_M_contig109765.2034.1|Name=mRNA_M-pyrifera_M_contig109765.2034.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig109765:8..603- (Macrocystis pyrifera P11B4 male)back to top |