mRNA_M-pyrifera_M_contig109503.1991.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: L8H1Q7_ACACA (GRIP domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1Q7_ACACA) HSP 1 Score: 88.6 bits (218), Expect = 3.210e-18 Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 22 EKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
E+ V ++ ++A ++L + + + +L+ LA++E +KLHL+Q Q LKE+IRE ERAQKREG+N+ YLKN++VKYME G+HD LP + + L F+P
Sbjct: 1299 ERGLTNNVLYNQMKAAHREELHRLKLELEDLRSALADAERTTKLHLMQEQVLKEEIREFERAQKREGSNIGYLKNIIVKYMETGEHDALLPVISTV-LQFTP 1399
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: A0A7S4ICK2_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ICK2_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 1.070e-17 Identity = 45/107 (42.06%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 7 GGSDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
G + L+HF+ ++A+ +D+ ++++ I +L L ES+++++L+ +Q LKEDIRELER++KRE ANL+YLKNV+VKYME D + LP + + L F+P
Sbjct: 186 GNRKEPPKDKNLLHFAQVEALHEDEKKRSQQKIEDLSRLLEESQSINRLNKIQVNGLKEDIRELERSRKREDANLDYLKNVIVKYMETHDKEALLPVISTI-LQFNP 291
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: A0A0D2VZR8_CAPO3 (GRIP domain-containing protein (Fragment) n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZR8_CAPO3) HSP 1 Score: 79.7 bits (195), Expect = 4.090e-15 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 1 PPGGSDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYM 264
PP + V LVH + +QA RD++LA ARRS EL+ + AE E + HL Q Q LK++IR ER KR NLEYLKNVVV+YM
Sbjct: 882 PPNSARVASEMNHLVHLATMQAKRDEELAAARRSRRELEERAAEVEERERKHLEQIQVLKDEIRRAERNDKRSNVNLEYLKNVVVRYM 969
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: A0A8J4V4L4_9ROSI (GRIP domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4V4L4_9ROSI) HSP 1 Score: 74.3 bits (181), Expect = 1.730e-14 Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 13 SDVEKRKAGLVHFS--HL----QAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
+ VE K L H HL QA R+++LAQ++R I LQ ++ E E ++LH Q LK ++R +ER QKREG ++ YLKNV++K +E G+ + LP + +L L FSP
Sbjct: 14 ASVESVKGELAHLKREHLLARQQAQREEELAQSQRHILALQEEIEELERKNRLHSQQEAMLKIELRNMERMQKREGVDMTYLKNVILKLLETGEVEALLPVIGML-LQFSP 123
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: A0A0K9PII1_ZOSMR (Protein GRIP (Fragment) n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PII1_ZOSMR) HSP 1 Score: 75.5 bits (184), Expect = 8.400e-14 Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 13 SDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
SD+ + ++ + QA R+D+L Q++R I LQ ++ E E ++LH Q LKE++R +ER KREG ++ YLKNV++K +E G+ D LP + L L FSP
Sbjct: 213 SDIAAAEQQILILARQQAQREDELTQSQRHIMALQEEIVELERENRLHSQQEAMLKEEVRNVERNHKREGVDMTYLKNVILKLLETGEVDALLPVVGTL-LQFSP 316
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: A0A2P6RLB5_ROSCH (Putative GRIP domain-containing protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RLB5_ROSCH) HSP 1 Score: 72.8 bits (177), Expect = 1.230e-13 Identity = 41/108 (37.96%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 4 PGGSDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
P + ++ + QA R+++LAQ++R I LQ ++ E E+ ++LH Q LK ++R +ER+QKREG ++ YLKNV++K +E G+ + LP + +L L FSP
Sbjct: 44 PSSLSTSALEQQILILARQQAQREEELAQSQRHILALQEEIEELEHENRLHSQQETMLKTELRNMERSQKREGVDMTYLKNVILKLLETGEVEALLPVVGML-LQFSP 150
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: B9S6T3_RICCO (GTP binding protein, putative n=3 Tax=Ricinus communis TaxID=3988 RepID=B9S6T3_RICCO) HSP 1 Score: 75.1 bits (183), Expect = 1.660e-13 Identity = 42/96 (43.75%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 40 LVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
++ + QA R+++LAQ++R I LQ ++ E E ++LH Q LK ++R +ER QKREG +L YLKNV++K +E G+ +V LP + +L L FSP
Sbjct: 647 ILLLARQQAQREEELAQSQRHILALQEEIEELERENRLHTQQEAMLKTELRNMERTQKREGVDLTYLKNVIMKLLETGEVEVLLPVIAML-LQFSP 741
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: A0A251SHY7_HELAN (Putative GRIP domain-containing protein n=2 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251SHY7_HELAN) HSP 1 Score: 75.1 bits (183), Expect = 1.660e-13 Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = 1
Query: 13 SDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
S+ + ++ + QA R+++LAQ++R I LQ +L E E+ ++LH Q LKE++R +ER++KREG ++ YLKNV+VK +E G+ LP + +L L FSP
Sbjct: 646 SNTSVAEQQILILARQQAQREEELAQSQRHILALQEELEELEHENRLHSQQEAMLKEELRNMERSKKREGVDMTYLKNVIVKLLETGEVGALLPVIAML-LQFSP 749
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: A0A0V0IVU0_SOLCH (GRIP domain-containing protein n=8 Tax=Solanum TaxID=4107 RepID=A0A0V0IVU0_SOLCH) HSP 1 Score: 74.7 bits (182), Expect = 2.260e-13 Identity = 43/105 (40.95%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 13 SDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
SD +++ ++ + QA R+++LAQ++R I LQ ++ E E ++LH Q LKE++R ++R+QKREG +L YLKNV++K +E G+ + LP + +L L FSP
Sbjct: 656 SDADQQ---ILVLARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEAKLKEELRNMDRSQKREGVDLTYLKNVILKLLETGEVEALLPVVAML-LQFSP 756
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Match: G7K011_MEDTR (GRIP domain protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7K011_MEDTR) HSP 1 Score: 74.7 bits (182), Expect = 2.290e-13 Identity = 43/105 (40.95%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 13 SDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKLHLLQTQALKEDIRELERAQKREGANLEYLKNVVVKYMEGGDHDVRLPPLRLLCLSFSP 327
SD E + ++ + QA R+++LAQ++R I LQ ++ E E+ ++LH Q LK ++R +ERA+KREG ++ YLKN+++K +E G+ +V LP + +L L FSP
Sbjct: 783 SDAEHQ---ILILARQQAQREEELAQSQRHILALQEEIEELEHENRLHSQQEAMLKSELRNMERAKKREGVDMTYLKNIILKLLETGEVEVLLPVIGML-LQFSP 883 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109503.1991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109503.1991.1 >prot_M-pyrifera_M_contig109503.1991.1 ID=prot_M-pyrifera_M_contig109503.1991.1|Name=mRNA_M-pyrifera_M_contig109503.1991.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp PPGGSDVEKRKAGLVHFSHLQAVRDDDLAQARRSIAELQLQLAESENMSKback to top mRNA from alignment at M-pyrifera_M_contig109503:179..505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109503.1991.1 ID=mRNA_M-pyrifera_M_contig109503.1991.1|Name=mRNA_M-pyrifera_M_contig109503.1991.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig109503:179..505+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109503:179..505+ >mRNA_M-pyrifera_M_contig109503.1991.1 ID=mRNA_M-pyrifera_M_contig109503.1991.1|Name=mRNA_M-pyrifera_M_contig109503.1991.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig109503:179..505+ (Macrocystis pyrifera P11B4 male)back to top |