mRNA_M-pyrifera_M_contig109407.1972.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: A0A4R8UTZ3_9MICO (Uncharacterized protein n=1 Tax=Cryobacterium sp. HLT2-23 TaxID=1259145 RepID=A0A4R8UTZ3_9MICO) HSP 1 Score: 95.9 bits (237), Expect = 7.750e-21 Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 1
Query: 46 RNLVDRSYLADFYPAFVSLHSDTKSLIARWVANRYVRSAFADNFNERTRKVSRKVRDKAKKCGKWLTGIYLLVSDDELPEGDIYQVAIVSTMRPTDFGDPEKRSLSDAVMLTIESAFNDCEGVDLLASELRSEDNFSMTEFLSLKRWDFDDLSVRDEGAT 525
R +DR LA P L + + ++A W+ +RY R AFAD FN R + ++ K G+ ++GIY+ + DELP G Y + ++ MR DF +P+ D I +CEGVDL+ E++SE + S+ E + RWD+D L+ R G++
Sbjct: 99 RRTIDRRLLAGATPQG-QLEAAVQRVLAAWLGSRYSRPAFADEFNARVEGTTSRIGKALKNNGQAMSGIYVATTLDELPSGSDYPLQMLFCMRTEDFVEPDLWGQVDEAAEQIAKLMRECEGVDLIDYEVKSEADTSLEELRTFARWDYDWLTFRTLGSS 257
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: UPI00047BEB18 (hypothetical protein n=1 Tax=Acidobacterium ailaaui TaxID=1382359 RepID=UPI00047BEB18) HSP 1 Score: 82.8 bits (203), Expect = 4.280e-16 Identity = 56/169 (33.14%), Postives = 85/169 (50.30%), Query Frame = 1
Query: 16 HQMMECDAKMRNLVDRSYLADFYPAFVSLHSDTKSLIARWVANRYVRSAFADNFNERTRKVSR---KVRDKAKKCGKWLTGIYLLVSD-DELPEGDIYQVAIVSTMRPTDFGDPEKRSLSDAVMLTIESAFNDCEGVDLLASELRSEDNFSMTEFLSLKRWDFDDLSVR 510
+Q E R+ R L P ++L D I RW ANRY+RSAF D FNER R ++ K+ G +TGI+L V +E+P + YQV + T R F E + + + I F++ +G++++ L SE +FS+ + + RWD+D LS R
Sbjct: 60 NQTYEIKMHERSYAPRECLLGHVPRDLNLEEDLIRTIIRWTANRYLRSAFPDGFNERLATAKRSMMRIETALKRGGTLITGIFLRVDPAEEIPAEEPYQVIMRLTAREEIFEQRELETRALELTEAIRREFDNIDGIEVVDYALVSEADFSLADVRATLRWDYDYLSYR 228
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: A0A3F2V674_9GAMM (Uncharacterized protein n=1 Tax=Ketobacter sp. TaxID=2083498 RepID=A0A3F2V674_9GAMM) HSP 1 Score: 59.7 bits (143), Expect = 1.980e-7 Identity = 48/172 (27.91%), Postives = 87/172 (50.58%), Query Frame = 1
Query: 25 MECDAKMRNLVDRSYLADFYPAFVSLHSDTKSLIARWVANRYVRSAFADNFNER-TR-KVSRKVRDKAKKCGKWLTGIYLLVSDDELPEGDIYQVAIVSTMRPTDFGDPEKRSLSDAVMLTIESAF---------NDCEGVDLLASELRSEDNFSMTEFLSLKRWDFDDLSV 507
+E + + V ++ LA+ P+ V + K + RW+A+RY RSAF D F +R TR K+ RK+ D KK G + IY ++++E + Y + IV M T+ ++ + ++ IE+AF + + ++L ++ S++ FS LK W + +S+
Sbjct: 92 IELEVLSKQSVLKTELAEHAPSDVHRNKSAKVIFQRWLASRYRRSAFPDQFEQRLTRHKLDRKIVDAGKKLGSDIAAIYFDLTNEEASPDETYLLGIV-IMYQTEDDTARAKAAATSMKSKIETAFQAKLYSNTDHKWKDIELEYVDVISDEGFSYRMSQILKPWRLEYISL 262
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: A0A0C3IWR2_9RHOO (Uncharacterized protein n=1 Tax=Thauera sp. SWB20 TaxID=1572758 RepID=A0A0C3IWR2_9RHOO) HSP 1 Score: 57.8 bits (138), Expect = 9.850e-7 Identity = 51/166 (30.72%), Postives = 87/166 (52.41%), Query Frame = 1
Query: 46 RNLVDRSYLADFYP--AFVSLHSDTKSLIARWVANRYVRSAFADNFNERTRKVSRKVRDKAKKCGKWLTGIYLLVSDD-ELPEGDIYQVAIVSTMRPTDFGDPEKRSLSDAVMLTIESAFNDCEGVDLLASELRSEDNFSMTEFLSLKRWDFDDLSVRDEGATGLP 534
R LVDR+ LAD P +V L +D ++A W+A RYVR+AF D+FN K + + ++G+Y ++ D +L EG+ Y + +++ + +F E S+S +V I+S G+D+ + +R ED S S +R+ + LS+R + +P
Sbjct: 111 RVLVDRAALADCIPHDEWVVLQADL-DVMANWLAQRYVRAAFPDDFNTLLDATRSKQKKLHVRLSPDVSGLYARLNPDRDLLEGERYVLDLLALV--PEFRRDELSSVSKSVQALIDSIR--ATGIDVRGN-VRMEDEVSYGLVRSFRRFPLEHLSLRGDPPDPMP 270
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: UPI001FCCAB4A (hypothetical protein n=1 Tax=Pseudomonas luteola TaxID=47886 RepID=UPI001FCCAB4A) HSP 1 Score: 56.2 bits (134), Expect = 3.540e-6 Identity = 55/191 (28.80%), Postives = 92/191 (48.17%), Query Frame = 1
Query: 16 HQMMECDAKMRNLVDRSY------LADFYPA-FVSLHSDTKSLIARWVANRYVRSAFADNFNERTR---KVSRKVRDKAKKCGKWLTGIYLLVSD--DELPEG--DIYQVAIVSTMRPTDFGDPEKRSLS-DAVMLTIESAF-NDC--EGVD------LLASELRSEDNFSMTEFLSLKRWDFDDLSVRDE 516
HQ +E D R V + + LA + P + + +S+ RW+A RY RS+F D F+ R + KV+ ++ K G ++ ++ V ++ EG D+Y+++IV D DP+ ++ + V IES F N C EG D LL + S++ + + L L RW D +S+R +
Sbjct: 90 HQRIELDTGRRIRVPKEHEDPSKALASYEPPQHILMKGAERSIFQRWLAARYRRSSFPDEFDRRLKDQTKVAERLAKAFKDSGNYIPAVFFDVDTGLEKKREGEDDLYELSIVILYSTED--DPDAAEIAAETVAKAIESIFKNRCKIEGADAWKWIELLEVSVISDEALTYRQSLQLTRWQADHISLRSD 278
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: N6XWH9_9RHOO (Uncharacterized protein n=4 Tax=unclassified Thauera TaxID=2609274 RepID=N6XWH9_9RHOO) HSP 1 Score: 55.1 bits (131), Expect = 7.940e-6 Identity = 53/168 (31.55%), Postives = 83/168 (49.40%), Query Frame = 1
Query: 46 RNLVDRSYLADFYP--AFVSLHSDTKSLIARWVANRYVRSAFADNFNERTRKVSRKVRDKAKKCGKWLTGIYLLVSDD-ELPEGDIYQVAIVSTMRPTDFGD--PEKRSLSDAVMLTIESAFNDCEGVDLLASELRSEDNFSMTEFLSLKRWDFDDLSVRDEGATGLP 534
R VDR+ LAD P V L +D L+ W+A RYVR+AF D+FN K + + ++G+Y ++ D EL EG+ Y + +++ + PT GD P A++ I +A G+D S +R ED S S +R+ + LS+R + +P
Sbjct: 93 RLFVDRAVLADRMPDDTRVVLQADL-DLLVTWLAQRYVRAAFPDDFNSLLDATRSKQKKLHARLSPDVSGLYARLNPDRELLEGERYTLDLLALV-PTFRGDALPSVGKSVQALVDLIRAA-----GIDARGS-VRLEDEVSYGFVRSFRRFPLEHLSLRGDSPDPMP 252
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: A0A5E5AUD5_9BURK (Uncharacterized protein n=2 Tax=Pandoraea captiosa TaxID=2508302 RepID=A0A5E5AUD5_9BURK) HSP 1 Score: 55.1 bits (131), Expect = 8.580e-6 Identity = 52/191 (27.23%), Postives = 89/191 (46.60%), Query Frame = 1
Query: 1 FARQGHQMMECDAKMRNLVDRSYLADFYP-AFVSLHSDTKSLIARWVANRYVRSAFADNFNERTRK---VSRKVRDKAKKCGKWLTGIYLLVSDD-ELPEG---DIYQVAIVSTMRPTDFGDPE---KRSLSDAVMLTIESAFND--------CEGVDLLASELRSEDNFSMTEFLSLKRWDFDDLSVRDE 516
FA H E +A + +D+ L ++ P + V L S+ +++ W+A+RY RSAFAD F R K ++ K+ K G+ + G++ V + E+ D Y++ I+ + DP+ S + A IE AF + + ++L + E SE + F LKRW + +S+ E
Sbjct: 83 FAGDAHFWAEFEATAKVRIDKLKLNEYSPRSDVQLRSEDHAVLQMWLASRYRRSAFADEFERRLTKETKLAEKIAKAVKPHGELIIGVFFDVDEGAEVARNGPDDTYKLDIIILHQ----ADPDFVAAESAAKAAADAIEKAFREKLFAPSKQWQQIELRSCEPMSESVLTYQVFRQLKRWRLEHMSLAAE 269
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: UPI001C7F598A (hypothetical protein n=1 Tax=Sphaerotilus natans TaxID=34103 RepID=UPI001C7F598A) HSP 1 Score: 55.1 bits (131), Expect = 8.660e-6 Identity = 51/188 (27.13%), Postives = 83/188 (44.15%), Query Frame = 1
Query: 28 ECDAKMRNLVDRSYLADFYPAF-VSLHSDTKSLIARWVANRYVRSAFADNFNERTRKVSRKVRDKAKKC----GKWLTGIYLLVSDDELPEGD------IYQVAIVSTMRPTDFGDPEKRSLSDAVMLTIESAFND--------CEGVDLLASELRSEDNFSMTEFLSLKRWDFDDLSVRDEGATGLP 534
E DA + +D+ L +F P L + ++ W+A+RY RSAF D F R K+ +K K G+ +TG++ V + E D + I+ P DF EK +++ A I++AF D + ++L + E SE + +F LKRW D +S+ +P
Sbjct: 93 EFDATAKVPIDKFKLNEFDPRTDARLTPENHAVFQMWLASRYRRSAFPDEFERRLTSKGFKLHEKIAKAVKPHGELITGVFFDVDNGEEATRDGPDDTYTLDITILHAADP-DFDAAEKAAIAAAK--AIQTAFEDKLFKPTMTWQHIELSSCEATSESVLTYQQFKQLKRWRLDHISLAATPQQSVP 277
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: A0A5P2S8M2_PSELU (Uncharacterized protein n=2 Tax=Pseudomonas luteola TaxID=47886 RepID=A0A5P2S8M2_PSELU) HSP 1 Score: 53.5 bits (127), Expect = 1.410e-5 Identity = 47/161 (29.19%), Postives = 80/161 (49.69%), Query Frame = 1
Query: 85 PAFVSLHSDTKSLIARWVANRYVRSAFADNFNERTR---KVSRKVRDKAKKCGKWLTGIYLLVSD--DELPEG--DIYQVAIVSTMRPTDFGDPEKRSLS-DAVMLTIESAF-NDC--EGVD------LLASELRSEDNFSMTEFLSLKRWDFDDLSVRDE 516
P + + +S+ RW+A RY RS+F D F+ R + KV+ ++ K G ++ ++ V ++ EG D+Y+++IV D DP+ ++ + V IES F N C EG D LL + S++ + + L L RW D +S+R +
Sbjct: 18 PQHILMKGAERSIFQRWLAARYRRSSFPDEFDRRLKDQTKVAERLAKAFKDSGNYIPAVFFDVDTGLEKKREGEDDLYELSIVILYSTED--DPDAAEIAAETVAKAIESIFKNRCKIEGADAWKWIELLEVSVISDEALTYRQSLQLTRWQADHISLRSD 176
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Match: A0A2K9LCE1_9RHOO (Uncharacterized protein n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A2K9LCE1_9RHOO) HSP 1 Score: 52.4 bits (124), Expect = 7.510e-5 Identity = 40/153 (26.14%), Postives = 75/153 (49.02%), Query Frame = 1
Query: 94 VSLHSDTKSLIARWVANRYVRSAFADNFNERTRK--VSRKVRDKAKKCGKWLTGIYLLVSDD---ELPEGDIYQVAIVSTMRPTDFGDPEKRSLSDAVMLTIESAFNDCEGVDLLASELR-------SEDNFSMTEFLSLKRWDFDDLSVRDE 516
++L D K ++ +W+A RY R AF D F ER RK V RK+ K K+L G++ + + E EG+ Y ++I S + + G + R ++ V + F G +A+E+ ++ ++ + + +W + +S+RD+
Sbjct: 114 LALPIDAKRVLKQWLAARYGRPAFPDEFEERLRKGEVERKIAKILKPDAKYLVGLFFDLGEQRRTEAGEGEPYALSI-SVVYDANEGGADARGAAERVAARLRELFEKTYGKPDVATEIALDACEAVADTYLTLADLRRVDQWRLEYISLRDD 265 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109407.1972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109407.1972.1 >prot_M-pyrifera_M_contig109407.1972.1 ID=prot_M-pyrifera_M_contig109407.1972.1|Name=mRNA_M-pyrifera_M_contig109407.1972.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp MMECDAKMRNLVDRSYLADFYPAFVSLHSDTKSLIARWVANRYVRSAFADback to top mRNA from alignment at M-pyrifera_M_contig109407:7..549+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109407.1972.1 ID=mRNA_M-pyrifera_M_contig109407.1972.1|Name=mRNA_M-pyrifera_M_contig109407.1972.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig109407:7..549+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109407:7..549+ >mRNA_M-pyrifera_M_contig109407.1972.1 ID=mRNA_M-pyrifera_M_contig109407.1972.1|Name=mRNA_M-pyrifera_M_contig109407.1972.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig109407:7..549+ (Macrocystis pyrifera P11B4 male)back to top |