mRNA_M-pyrifera_M_contig109385.1958.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: A0A6B0ZRB9_9ACTN (Uncharacterized protein n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B0ZRB9_9ACTN) HSP 1 Score: 362 bits (928), Expect = 1.720e-122 Identity = 167/200 (83.50%), Postives = 180/200 (90.00%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAE 600
VLSAQYRLMIRTDRGAVE+KA + KY +EIEPYTDEQIAEI A + EP+RRRGAEPRWWEDVEEGDEL PLVKGP+RVTDMVVWHTGMGMGLYGVKALRL QQR+RVPGFFR DDLNIPDV QRVHWDPEWA+RAGNPAIYDYGRMRETWLVHLCTDWMGDDAWL LDV+FR+FNYVGDTHWMRG+V RK+ +
Sbjct: 160 VLSAQYRLMIRTDRGAVERKADEGEGKYDSIEIEPYTDEQIAEITQAVSTEPERRRGAEPRWWEDVEEGDELPPLVKGPMRVTDMVVWHTGMGMGLYGVKALRLGVQQRQRVPGFFRPDDLNIPDVQQRVHWDPEWARRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLAALDVQFRRFNYVGDTHWMRGKVTRKYRTD 359
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: A0A7Y2GKU6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKU6_9ACTN) HSP 1 Score: 338 bits (866), Expect = 3.930e-113 Identity = 159/201 (79.10%), Postives = 175/201 (87.06%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
VLSAQYRLMIRTDR VE AK + K VEIEPYTDE IA I + A DRRRGAEPR+WE++ EGDEL PLVKGPLRVTD+VVWHTG+GMGLYGVKAL LA +QR+RVPGFFR D+LNIPDVHQRVHWDP WA RAG+PAIYDYGRMRETWL+HLCTDWMGDDAWLWKLDVEFR+FNYVGDTHW+RGRV RK+LA+G
Sbjct: 159 VLSAQYRLMIRTDRRGVE--AKGDEGKNFDVEIEPYTDEAIAAIASEVAAAADRRRGAEPRFWEEIAEGDELGPLVKGPLRVTDIVVWHTGVGMGLYGVKALNLAHRQRQRVPGFFRPDELNIPDVHQRVHWDPAWAARAGSPAIYDYGRMRETWLIHLCTDWMGDDAWLWKLDVEFRRFNYVGDTHWIRGRVTRKYLADG 357
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: A0A354B6Q0_9ACTN (Uncharacterized protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B6Q0_9ACTN) HSP 1 Score: 333 bits (854), Expect = 2.590e-111 Identity = 154/201 (76.62%), Postives = 173/201 (86.07%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
+LSAQ+RLMIRTDR V K K GV+IEPYTD+QIA I AA A +RRRG PR+WEDVEEGDEL PLVKGPLR+TD+VVWH+G+GMGLYGVK+L LA QQR R+PGFFR DDLNIPDVHQRVHWDPEWA+RAG+PA YDYGRMRETWL+HLCTDWMGDDAWLWKLD EFR+FNYVGDTHWMRGRV R++LA+G
Sbjct: 158 MLSAQFRLMIRTDRKTVADKGDRG--KNFGVDIEPYTDKQIANIAAAVAEAAERRRGPTPRYWEDVEEGDELGPLVKGPLRITDIVVWHSGVGMGLYGVKSLDLAHQQRARIPGFFRPDDLNIPDVHQRVHWDPEWARRAGSPATYDYGRMRETWLIHLCTDWMGDDAWLWKLDCEFRRFNYVGDTHWMRGRVTRRYLADG 356
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: A0A7K1Z8P4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8P4_9ACTN) HSP 1 Score: 330 bits (845), Expect = 6.370e-110 Identity = 155/202 (76.73%), Postives = 175/202 (86.63%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDR-RRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
VLS+QYRLM+RTDR VE+K + K +G EIEPY+DE+IA+I AA E R RRGAEPR+WEDV EGDEL LVKGPLRVTD+VVWH+G+GMGLYGVKAL LA QR R+PGFFR DDLNIPDVHQRVHWDP WA RAG+PA+YDYGRMRETWL+HLCTDWMGDDAWLWKLDVEFR+FNYVGDTHWMRGRV R++LA+G
Sbjct: 160 VLSSQYRLMVRTDRDTVERKGEAG--KNSGFEIEPYSDEEIADI-AAQVNEASRCRRGAEPRFWEDVTEGDELGTLVKGPLRVTDIVVWHSGVGMGLYGVKALNLAHSQRARIPGFFRPDDLNIPDVHQRVHWDPAWAARAGSPAVYDYGRMRETWLIHLCTDWMGDDAWLWKLDVEFRRFNYVGDTHWMRGRVNRRYLADG 358
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: UPI001E332558 (hypothetical protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E332558) HSP 1 Score: 318 bits (815), Expect = 1.730e-105 Identity = 145/201 (72.14%), Postives = 163/201 (81.09%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
+LS QYRLMIRT+R ++ D VEI PYTD++I I+ A AGE DRRRGAEPRWWE+VEEGDEL LVKGPLR+TDMVVWHTG+GMGLYGV LR R+P FF+RD+LN+PDV QR+HWDPEWAKRAGNP YDYGRMRETWL+HLCTDWMGDDAWLWKLD +FRKFNYVGDTHWMRG V RK+LAEG
Sbjct: 156 MLSGQYRLMIRTERQKARERKANDD-----VEIRPYTDDEIEAIEEAVAGERDRRRGAEPRWWEEVEEGDELPTLVKGPLRITDMVVWHTGVGMGLYGVSGLRQNVDHHRRMPRFFKRDELNVPDVQQRLHWDPEWAKRAGNPTSYDYGRMRETWLIHLCTDWMGDDAWLWKLDCQFRKFNYVGDTHWMRGTVTRKYLAEG 351
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: A0A538LMN0_9ACTN (MaoC_dehydrat_N domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LMN0_9ACTN) HSP 1 Score: 313 bits (802), Expect = 1.610e-103 Identity = 145/201 (72.14%), Postives = 166/201 (82.59%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
+LSAQYRLMIRT+RG + K Y +E+EPYTDEQIAEI++ YA E R RGAEPRWWEDV EGDEL PLVKGPL VTDM+ WH GMGMGLYGV+ LRLA + R+R+P FF RD+LN+PDV QRVHWDPE A+R+GNPA YDYGRMRETWL+HLCTDWMGDDAWLWKLD EFR FNYVGDT W+RG V R++LA+G
Sbjct: 161 LLSAQYRLMIRTERGRARTRGK-----YEDIELEPYTDEQIAEIESHYATE--RPRGAEPRWWEDVHEGDELGPLVKGPLTVTDMICWHVGMGMGLYGVQPLRLAWRNRQRIPRFFYRDELNVPDVMQRVHWDPELARRSGNPATYDYGRMRETWLIHLCTDWMGDDAWLWKLDCEFRLFNYVGDTQWLRGVVTRRYLADG 354
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: A0A6I3I5F8_9ACTN (Uncharacterized protein n=5 Tax=root TaxID=1 RepID=A0A6I3I5F8_9ACTN) HSP 1 Score: 307 bits (786), Expect = 4.520e-101 Identity = 145/202 (71.78%), Postives = 162/202 (80.20%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRG-AVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
VLS QYRLMIR +R A+E+KA A +EI PYTD++IA I E RRRGA PR+WEDVE GDE+ PLVKGPLRVTDMVVWHTGMGMGLYGV ALRLA QR+R+P FF+ D LNIPDV QRVHWD EWA+ AGNP YDYGRMRETWL+HLCTDWMGDDAWLWKLD +FRKFNYVGDTHWMRG V +K+L +G
Sbjct: 159 VLSGQYRLMIRAEREKAIERKANDA------IEIAPYTDDEIASISEQIGEERSRRRGATPRFWEDVEVGDEIGPLVKGPLRVTDMVVWHTGMGMGLYGVAALRLADDQRKRMPRFFKPDALNIPDVQQRVHWDAEWARNAGNPTSYDYGRMRETWLIHLCTDWMGDDAWLWKLDCQFRKFNYVGDTHWMRGMVSKKYLTDG 354
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: UPI000234C77E (hypothetical protein n=3 Tax=Frankiaceae TaxID=74712 RepID=UPI000234C77E) HSP 1 Score: 303 bits (775), Expect = 5.000e-99 Identity = 141/200 (70.50%), Postives = 158/200 (79.00%), Query Frame = 1
Query: 4 LSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
LS QYR M+RT+R ++ K YA +E + YTDEQIAEI+AAY E RRG +PR WEDV+ GD + P+VKGPLRVTDMV WH GMGMGLYGV LRLA R R+PGF+ RDDLNIPDV QRVHWDPE A+RAGNP YDYGRMRETWL+HLCTDWMGDDAWLWKL EFRKFNYVGDT W+RG VVRK+LAEG
Sbjct: 191 LSGQYRNMVRTERRKARERGK-----YAKIEPQRYTDEQIAEIEAAYDAEATARRGGDPRHWEDVQIGDTIGPMVKGPLRVTDMVCWHVGMGMGLYGVAPLRLALANRRRIPGFYYRDDLNIPDVQQRVHWDPELARRAGNPTTYDYGRMRETWLIHLCTDWMGDDAWLWKLSCEFRKFNYVGDTQWLRGTVVRKYLAEG 385
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: A0A538JEN7_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JEN7_9ACTN) HSP 1 Score: 300 bits (767), Expect = 3.490e-98 Identity = 139/201 (69.15%), Postives = 162/201 (80.60%), Query Frame = 1
Query: 1 VLSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
+L+ QYRLMIRT+R +KA+ KY V IEPYTD+ +AEID YA E R RG+EPRWW+DVEEGDE+ PLVKGPL VTD++ WH GMGMGLYGVK LRL + R RVP FF +DDL +PDV QRVHWDP +A+RAGNP +DYGRMRETWL+HLCTDWMGDDAWLWKLD EFR FNYVGDTHWMRGRV R+++ +G
Sbjct: 166 LLAGQYRLMIRTER----EKARDRK-KYDDVVIEPYTDDALAEIDEHYARE--RARGSEPRWWDDVEEGDEVGPLVKGPLTVTDIICWHVGMGMGLYGVKPLRLGWRNRRRVPRFFHKDDLGVPDVLQRVHWDPSYARRAGNPTTFDYGRMRETWLIHLCTDWMGDDAWLWKLDCEFRLFNYVGDTHWMRGRVTRRYVVDG 359
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Match: UPI001931D832 (hypothetical protein n=1 Tax=unclassified Frankia TaxID=2632575 RepID=UPI001931D832) HSP 1 Score: 299 bits (765), Expect = 1.670e-97 Identity = 138/200 (69.00%), Postives = 157/200 (78.50%), Query Frame = 1
Query: 4 LSAQYRLMIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAEPRWWEDVEEGDELDPLVKGPLRVTDMVVWHTGMGMGLYGVKALRLAQQQRERVPGFFRRDDLNIPDVHQRVHWDPEWAKRAGNPAIYDYGRMRETWLVHLCTDWMGDDAWLWKLDVEFRKFNYVGDTHWMRGRVVRKHLAEG 603
LS QYR M+RT+R ++ K Y +E + YTDEQIAEI+AAY E RRG +PR+WEDVE GD++ P+VKGPLRVTDMV WH GMGMGLYGV LRLA R R+P F+ RDDLNIPDV QRVHWDPE A+RAGNP YDYGRMRETWL+HLCTDWMGDDAWLWKL EFRKFNYVGDT W+RG VV+K+LA G
Sbjct: 194 LSGQYRNMVRTERRKARERGK-----YTKIEPQRYTDEQIAEIEAAYDAEVSARRGGDPRYWEDVEVGDQVGPMVKGPLRVTDMVCWHVGMGMGLYGVAPLRLALTNRRRIPSFYYRDDLNIPDVQQRVHWDPELARRAGNPTTYDYGRMRETWLIHLCTDWMGDDAWLWKLSCEFRKFNYVGDTQWLRGTVVQKYLATG 388 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109385.1958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109385.1958.1 >prot_M-pyrifera_M_contig109385.1958.1 ID=prot_M-pyrifera_M_contig109385.1958.1|Name=mRNA_M-pyrifera_M_contig109385.1958.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp MIRTDRGAVEKKAKTADTKYAGVEIEPYTDEQIAEIDAAYAGEPDRRRGAback to top mRNA from alignment at M-pyrifera_M_contig109385:2..604- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109385.1958.1 ID=mRNA_M-pyrifera_M_contig109385.1958.1|Name=mRNA_M-pyrifera_M_contig109385.1958.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=603bp|location=Sequence derived from alignment at M-pyrifera_M_contig109385:2..604- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109385:2..604- >mRNA_M-pyrifera_M_contig109385.1958.1 ID=mRNA_M-pyrifera_M_contig109385.1958.1|Name=mRNA_M-pyrifera_M_contig109385.1958.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig109385:2..604- (Macrocystis pyrifera P11B4 male)back to top |