mRNA_M-pyrifera_M_contig109383.1957.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig109383.1957.1
Unique NamemRNA_M-pyrifera_M_contig109383.1957.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A5A8CG25_CAFRO (IPPc domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CG25_CAFRO)

HSP 1 Score: 178 bits (452), Expect = 1.270e-49
Identity = 92/143 (64.34%), Postives = 104/143 (72.73%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTG--------------------TVRSRRMGRAICVQEFIDDLRAGREPERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            YD+YVLGVQEAVSD++F AV+  TG                     VRSRRMGRAICVQEFIDD R G+ P+R  SM DMLDRV+GRGDGA ++PKFTGIAVFV P  A   RLLGVYKH+FGA EGSKGGVGVALG++D TM
Sbjct:  164 YDIYVLGVQEAVSDRIFRAVARFTGCYQLPLHAKLEPAKEASETHAVRSRRMGRAICVQEFIDDARKGKHPQRAASMTDMLDRVFGRGDGALIRPKFTGIAVFVTPSAAPYVRLLGVYKHSFGASEGSKGGVGVALGVYDSTM 306          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A813A7H8_9DINO (INPP5D protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A7H8_9DINO)

HSP 1 Score: 151 bits (381), Expect = 3.710e-40
Identity = 83/141 (58.87%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    4 DVYVLGVQEAVSDKVFEAVSAHTGT-------------------VRSRRMGRAICVQEFIDDLRAGREPERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            D+YVLG+QE VSD V++AV+A+TG                    VRSRRMG A+ VQ FI+D   G +    VS AD LDRV+GRGDGAFL+ KFTGIAVFVHP +A   RLLGVYKHAFGA EGSKGG  VALG++DQT+
Sbjct:  149 DLYVLGLQEGVSDSVYQAVAAYTGCFRLPLMAKLHRAKETAGSGVRSRRMGHAVNVQSFIEDFEGGADL-LPVSAADQLDRVWGRGDGAFLRQKFTGIAVFVHPVVAPYVRLLGVYKHAFGASEGSKGGAAVALGVYDQTL 288          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A7S1CL48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CL48_9STRA)

HSP 1 Score: 133 bits (335), Expect = 8.520e-34
Identity = 75/142 (52.82%), Postives = 87/142 (61.27%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGT-------------------VRSRRMGRAICVQEFIDDLRAGREPERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            YDVYVL VQE VSD  +EA + +TGT                   VRSRRMGRA+   +       G  PE V +  DMLDRV GRGDG+F+  KFTGIAVFV P +    RLLGVYK +FG  EGSKGGV VALG++D TM
Sbjct:  248 YDVYVLAVQEGVSDDAYEAFAEYTGTYRLPLHTKLYPAKEDKTAHVRSRRMGRAVNAHQLYAAHLRGEAPEPVAATKDMLDRVLGRGDGSFVSQKFTGIAVFVAPPVTPYVRLLGVYKQSFGVSEGSKGGVAVALGMYDVTM 389          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A067CIK4_SAPPC (IPPc domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIK4_SAPPC)

HSP 1 Score: 80.1 bits (196), Expect = 4.890e-15
Identity = 52/123 (42.28%), Postives = 69/123 (56.10%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGTVRSRRMGRAICVQEFIDDLRAGREPERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            YD+YVLGVQE VS+ V+ AV ++  T  SR  GR  C +E  +D  A   P +      + D V GRGDGAF+  KFTG+A+F    +A   +LL    H F    GSKGGV + L +   T+
Sbjct:  402 YDLYVLGVQEGVSENVYHAVLSYLNTNPSR--GR-YCRKELRNDKFA--YPLKASPADAVFDAVRGRGDGAFMGTKFTGLALFYAETVAADVQLLRAGVHKFSIASGSKGGVAIGLKLKYTTL 519          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A024G8I2_9STRA (IPPc domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8I2_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.870e-14
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGTVRSRRMGRAICVQEFIDDLRAGREPERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQT 366
            Y +YVLGVQE++S+ V+ A+ AH    +S++    + ++     ++        V     +D V GRGDGAF+  KFTGIAVF    I +  RL+    H F    GSKGGV VAL +++ T
Sbjct:  395 YHLYVLGVQESISENVYHAIEAHLNKNQSKKQYFRLELKNCDFMIKNHNYTGEAV-----IDAVRGRGDGAFVGTKFTGIAVFYAVEIQENLRLIRSGAHKFNLTSGSKGGVAVALMLNETT 511          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A7S3DD63_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DD63_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 6.150e-14
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGTVRSRRMGRAICVQEFIDDLRAGREPERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            YD+Y +GVQE V+D VF+ +                   E + DL   R P+         ++VYGRGDG+F  PKFTGI +FV   +    +LL      FGA EGSKG VG  +G+   T+
Sbjct:   68 YDIYAIGVQEGVNDNVFDKIG------------------EALPDLVRLRVPKDS-------NKVYGRGDGSFTHPKFTGIVIFVSREVLGSVKLLRSGALPFGAAEGSKGVVGAVVGVGRVTI 165          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: D0N6R3_PHYIT (IPPc domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0N6R3_PHYIT)

HSP 1 Score: 76.3 bits (186), Expect = 1.100e-13
Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGTVRSRRMGRAICVQEFIDDLRAGRE---PERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            Y +YVLGVQE VS+ V+ AV A+    R+ R  R   ++    D     +   P+ V+      D V+GRGDGAF+  KFTG+AVF    I  + +L+    H F    GSKGGV VAL ++  T+
Sbjct:  471 YQLYVLGVQEGVSENVYHAVEAYLN--RNERGARYYRMEMRNSDFMVNHKNYPPDAVI------DAVHGRGDGAFVGTKFTGMAVFYCADIQDKVKLIRAGAHKFKLTSGSKGGVAVALMVNHTTI 588          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A225VHL6_9STRA (IPPc domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VHL6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.100e-13
Identity = 51/126 (40.48%), Postives = 69/126 (54.76%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGTVRSRRMGRAICVQEFIDDLRAGRE---PERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            Y +YVLGVQE VS+ V+ AV A+    R+ R  R   ++    D     +   P+ V+      D V+GRGDGAF+  KFTG+AVF    I  + +L+    H F    GSKGGV VAL I+  T+
Sbjct:  474 YQLYVLGVQEGVSENVYHAVEAYLN--RNERGARYYRMEMKNSDFMVNHKNYPPDAVI------DAVHGRGDGAFVGTKFTGMAVFYCADIQDKIKLIRAGAHKFKLTSGSKGGVAVALMINHTTI 591          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A8J5MIR9_9STRA (Cilia- and flagella-associated protein 300 n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MIR9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.120e-13
Identity = 51/126 (40.48%), Postives = 69/126 (54.76%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGTVRSRRMGRAICVQEFIDDLRAGRE---PERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            Y +YVLGVQE VS+ V+ AV A+    R+ R  R   ++    D     +   P+ V+      D V+GRGDGAF+  KFTG+AVF    I  + +L+    H F    GSKGGV VAL I+  T+
Sbjct:  481 YQLYVLGVQEGVSENVYHAVEAYLN--RNERGARYYRMEMRNSDFMVNHKNYPPDAVI------DAVHGRGDGAFVGTKFTGMAVFYCADIQDKLKLIRAGAHKFKLTSGSKGGVAVALMINHTTI 598          
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Match: A0A1V9Z462_9STRA (IPPc domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z462_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.770e-13
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 1
Query:    1 YDVYVLGVQEAVSDKVFEAVSAHTGT--VRSRRMGRAICVQEFIDDLRAGREPERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKHAFGAMEGSKGGVGVALGIHDQTM 369
            YD+YVLGVQE VS+ V+ AV  +  +   ++R   + +   +F+  L+A  +P   V      D V GRGDGAF+  KFTG+A+F    +    +LL    H F    GSKGGV VA+ +   T+
Sbjct:  380 YDLYVLGVQEGVSENVYHAVLNYLNSNPTKARYFRKELRNDKFVYPLKA--QPADAV-----FDAVRGRGDGAFMGTKFTGLALFYAETVGADMQLLRAGVHKFSIASGSKGGVAVAVKLKYTTL 497          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109383.1957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CG25_CAFRO1.270e-4964.34IPPc domain-containing protein n=4 Tax=Cafeteria r... [more]
A0A813A7H8_9DINO3.710e-4058.87INPP5D protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A7S1CL48_9STRA8.520e-3452.82Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A067CIK4_SAPPC4.890e-1542.28IPPc domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A024G8I2_9STRA5.870e-1438.52IPPc domain-containing protein n=1 Tax=Albugo cand... [more]
A0A7S3DD63_9EUKA6.150e-1437.40Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
D0N6R3_PHYIT1.100e-1339.68IPPc domain-containing protein n=13 Tax=Phytophtho... [more]
A0A225VHL6_9STRA1.100e-1340.48IPPc domain-containing protein n=1 Tax=Phytophthor... [more]
A0A8J5MIR9_9STRA1.120e-1340.48Cilia- and flagella-associated protein 300 n=1 Tax... [more]
A0A1V9Z462_9STRA2.770e-1338.40IPPc domain-containing protein n=1 Tax=Achlya hypo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109383contigM-pyrifera_M_contig109383:180..605 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.0
Seed ortholog evalue2.1e-13
Seed eggNOG ortholog112098.XP_008616242.1
KEGG rclassRC00078
KEGG koko:K01099,ko:K14005
KEGG ReactionR04404,R09827
KEGG Pathwayko00562,ko01100,ko04070,ko04141,map00562,map01100,map04070,map04141
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol dephosphorylation
EggNOG OGsCOG5411@1,KOG0565@2759
EC3.1.3.36
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons2
Model size369
Cds size369
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815603.8296387-CDS-M-pyrifera_M_contig109383:179..2531622815603.8296387-CDS-M-pyrifera_M_contig109383:179..253Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109383 180..253 +
1692277483.3533232-CDS-M-pyrifera_M_contig109383:179..2531692277483.3533232-CDS-M-pyrifera_M_contig109383:179..253Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109383 180..253 +
1622815603.8479939-CDS-M-pyrifera_M_contig109383:310..6051622815603.8479939-CDS-M-pyrifera_M_contig109383:310..605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109383 311..605 +
1692277483.3635142-CDS-M-pyrifera_M_contig109383:310..6051692277483.3635142-CDS-M-pyrifera_M_contig109383:310..605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109383 311..605 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109383.1957.1prot_M-pyrifera_M_contig109383.1957.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig109383 180..605 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig109383.1957.1

>prot_M-pyrifera_M_contig109383.1957.1 ID=prot_M-pyrifera_M_contig109383.1957.1|Name=mRNA_M-pyrifera_M_contig109383.1957.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
YDVYVLGVQEAVSDKVFEAVSAHTGTVRSRRMGRAICVQEFIDDLRAGRE
PERVVSMADMLDRVYGRGDGAFLQPKFTGIAVFVHPRIAKQTRLLGVYKH
AFGAMEGSKGGVGVALGIHDQTM
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mRNA from alignment at M-pyrifera_M_contig109383:180..605+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig109383.1957.1 ID=mRNA_M-pyrifera_M_contig109383.1957.1|Name=mRNA_M-pyrifera_M_contig109383.1957.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig109383:180..605+ (Macrocystis pyrifera P11B4 male)
TACGACGTGTATGTGTTGGGTGTGCAGGAGGCAGTGAGCGACAAGGTGTT CGAGGCTGTGAGCGCTCACACTGGGTGTTTTCGGTTGCCGTTGCACGCCA AGCTGGAGCCTGCGCGGGAGAGCCGCGAGAGCACGGTGCGATCCCGTCGC ATGGGGAGAGCGATTTGCGTGCAGGAGTTTATTGATGATTTGCGGGCTGG TAGAGAGCCGGAGCGGGTGGTGAGCATGGCGGACATGCTGGACCGGGTGT ACGGTCGCGGGGATGGGGCGTTCTTGCAGCCCAAATTCACGGGAATCGCA GTTTTCGTCCACCCTCGTATCGCAAAGCAAACCAGACTGTTGGGAGTCTA CAAACATGCCTTTGGAGCGATGGAGGGCAGCAAAGGAGGCGTGGGCGTGG CGCTAGGCATCCACGACCAAACCATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig109383:180..605+

>mRNA_M-pyrifera_M_contig109383.1957.1 ID=mRNA_M-pyrifera_M_contig109383.1957.1|Name=mRNA_M-pyrifera_M_contig109383.1957.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig109383:180..605+ (Macrocystis pyrifera P11B4 male)
TACGACGTGTATGTGTTGGGTGTGCAGGAGGCAGTGAGCGACAAGGTGTT
CGAGGCTGTGAGCGCTCACACTGGTACGACGTGTATGTGTTGGGTGTGCA
GGAGGCAGTGAGCGACAAGGTGTTCGAGGCTGTGAGCGCTCACACTGGCA
CGGTGCGATCCCGTCGCATGGGGAGAGCGATTTGCGTGCAGGAGTTTATT
GATGATTTGCGGGCTGGTAGAGAGCCGGAGCGGGTGGTGAGCATGGCGGA
CATGCTGGACCGGGTGTACGGTCGCGGGGATGGGGCGTTCTTGCAGCCCA
AATTCACGGGAATCGCAGTTTTCGTCCACCCTCGTATCGCAAAGCAAACC
AGACTGTTGGGAGTCTACAAACATGCCTTTGGAGCGATGGAGGGCAGCAA
AGGAGGCGTGGGCGTGGCGCTAGGCATCCACGACCAAACCATGCACGGTG
CGATCCCGTCGCATGGGGAGAGCGATTTGCGTGCAGGAGTTTATTGATGA
TTTGCGGGCTGGTAGAGAGCCGGAGCGGGTGGTGAGCATGGCGGACATGC
TGGACCGGGTGTACGGTCGCGGGGATGGGGCGTTCTTGCAGCCCAAATTC
ACGGGAATCGCAGTTTTCGTCCACCCTCGTATCGCAAAGCAAACCAGACT
GTTGGGAGTCTACAAACATGCCTTTGGAGCGATGGAGGGCAGCAAAGGAG
GCGTGGGCGTGGCGCTAGGCATCCACGACCAAACCATG
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