mRNA_M-pyrifera_M_contig109250.1930.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A2E1VQH7_9BACT (Endonuclease n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1VQH7_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 5.800e-22 Identity = 49/87 (56.32%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 10 WAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLSGAARFAFDA-PQLPA 267
W Y+L S RTYVG++ D RR+ QHNGE + GAR+TRAGRPW+L + GPYADR AQ AEA KRLS R A + P LPA
Sbjct: 4 WYAYLLRSDSAARTYVGVSTDPDRRLAQHNGERVGGARSTRAGRPWQLAAIRGPYADRGEAQRAEAAWKRLSHTERLASCSDPSLPA 90
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A356T5H3_9DELT (Endonuclease n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T5H3_9DELT) HSP 1 Score: 86.3 bits (212), Expect = 2.860e-20 Identity = 45/77 (58.44%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 10 WAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLSGAARF 240
W VYVL SA RTYVGI DV RR+RQHNG L+ GAR+TRAGRPW + GP+ R A EAE+KRL G R
Sbjct: 7 WWVYVLLSADGARTYVGITTDVARRLRQHNGALVGGARSTRAGRPWTVAARRGPFESRGDASRREAEIKRLRGRRRL 83
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A2E7RHP1_9BACT (GIY-YIG domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E7RHP1_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 2.880e-20 Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 10 WAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLSGAARF 240
W +Y+L SA + TYVGI+ +V RR+R HNGE+ GA+ TRAGRPW L V GPY +R+ AQ AE E K+L G R
Sbjct: 12 WTLYILLSAEGDSTYVGISTNVERRLRAHNGEIAGGAKRTRAGRPWRLGAVVGPYPNRATAQTAEYEAKQLRGQERI 88
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A2E7UQQ9_9DELT (GIY-YIG domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UQQ9_9DELT) HSP 1 Score: 82.0 bits (201), Expect = 1.630e-18 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 APGWAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLSGAARFAFDAP 255
A W VY+L S RL R+Y+GIA +V RR+RQHNG+L GAR+TR+GRPW + GP+ DRS A E K++ G R ++ P
Sbjct: 5 ASEWWVYLLQSTRLRRSYIGIAINVDRRLRQHNGDLAGGARSTRSGRPWTVARRLGPFPDRSTASRVEYAWKQVRGRQRLYWNPP 89
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A7Y2CHP5_9BACT (GIY-YIG nuclease family protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2CHP5_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 5.040e-18 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 10 WAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVK 216
W VYVL S R+ RTYVG+ D RR+ +HNGE GA++TRAGRPW + +YGPY ++S AQ AE +V+
Sbjct: 3 WWVYVLRSERIRRTYVGVTTDPERRLAEHNGEKPGGAKSTRAGRPWGVAALYGPYKNQSEAQTAEHDVR 71
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A0D9XWU2_9ORYZ (GIY-YIG domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9XWU2_9ORYZ) HSP 1 Score: 78.6 bits (192), Expect = 2.170e-16 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 1 APGWAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLS 225
A GW VY++ S+R+ RTYVG++ D PRR+RQHNGEL GA+A+ AGRPW L + + +RS A E++ K +S
Sbjct: 47 ASGWCVYLIASSRIPRTYVGVSTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRSEACEFESKWKNIS 121
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: B8BM08_ORYSI (GIY-YIG domain-containing protein n=6 Tax=Oryza TaxID=4527 RepID=B8BM08_ORYSI) HSP 1 Score: 77.8 bits (190), Expect = 4.430e-16 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 1 APGWAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLS 225
A GW VY++ S+R+ RTYVG+ D PRR+RQHNGEL GA+A+ AGRPW L + + +RS A E++ K +S
Sbjct: 48 ALGWCVYLIASSRISRTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRSEACEFESKWKNIS 122
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A7C7H6L3_9BACT (GIY-YIG nuclease family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7H6L3_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 6.700e-16 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 1 APGWAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLSGAARFAF 246
A W VY+L S RTYVG+ D+ +R+ QHNG+L+ GA++TRAGRPW +R RS AQ EA++K LS R +
Sbjct: 15 AKKWTVYILISRDHSRTYVGVCLDITKRLAQHNGDLVGGAKSTRAGRPWCVRKKIENITSRSEAQALEAQIKLLSRRERLTY 96
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A0E0BF86_9ORYZ (GIY-YIG domain-containing protein n=2 Tax=Oryza glumipatula TaxID=40148 RepID=A0A0E0BF86_9ORYZ) HSP 1 Score: 78.2 bits (191), Expect = 7.040e-16 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 1 APGWAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLS 225
A GW VY++ S+R+ RTYVG+ D PRR+RQHNGEL GA+A+ AGRPW L + + +RS A E++ K +S
Sbjct: 87 ASGWCVYLIASSRIPRTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRSEACEFESKWKNIS 161
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Match: A0A0E0RDN7_ORYRU (GIY-YIG domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0RDN7_ORYRU) HSP 1 Score: 77.8 bits (190), Expect = 7.240e-16 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 1 APGWAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWELRVVYGPYADRSAAQIAEAEVKRLS 225
A GW VY++ S+R+ RTYVG+ D PRR+RQHNGEL GA+A+ AGRPW L + + +RS A E++ K +S
Sbjct: 48 ALGWCVYLIASSRISRTYVGVTTDFPRRLRQHNGELKGGAKASSAGRPWNLACLIEGFVNRSEACEFESKWKNIS 122 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109250.1930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109250.1930.1 >prot_M-pyrifera_M_contig109250.1930.1 ID=prot_M-pyrifera_M_contig109250.1930.1|Name=mRNA_M-pyrifera_M_contig109250.1930.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp APGWAVYVLWSARLERTYVGIAQDVPRRVRQHNGELIRGARATRAGRPWEback to top mRNA from alignment at M-pyrifera_M_contig109250:119..391+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109250.1930.1 ID=mRNA_M-pyrifera_M_contig109250.1930.1|Name=mRNA_M-pyrifera_M_contig109250.1930.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=273bp|location=Sequence derived from alignment at M-pyrifera_M_contig109250:119..391+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109250:119..391+ >mRNA_M-pyrifera_M_contig109250.1930.1 ID=mRNA_M-pyrifera_M_contig109250.1930.1|Name=mRNA_M-pyrifera_M_contig109250.1930.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig109250:119..391+ (Macrocystis pyrifera P11B4 male)back to top |