|
Homology
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A6H5JEX6_9PHAE (PseudoU_synth_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX6_9PHAE) HSP 1 Score: 328 bits (840), Expect = 8.180e-101 Identity = 257/480 (53.54%), Postives = 280/480 (58.33%), Query Frame = 1
Query: 133 ARVPPAISARGLSWKEKQRXXXXXXXXXXXXXXVAG--KGKKKRGQERDFDHSRWRKRTVAFQLMYEGGGYAGFCSQSEGNEDTIEKRLFHAFTTTKLVERIATGDNYSRCGRTDRGVSALGNVVTVSARSKFPKEL-DVELPTSPLGSVRVV---------SGGGXXXXXXXXXXXXRDEGSGSXXXXXXXXXXXXXXXXXXRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGREGMEREAR-----MGDVERSSGGG--GRGXXXXXXXXXXXXXXXXXXXXXSGGRECEASGQDASNGKATGEADKXXXXXXXXXXXXXKGDGTV---------------EVTEIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVANVSNFVRFIKFASVRPVPSPSP----DYGGT-------EYYRMCVFEV 1437
A VPP RGLSW+EKQR XXXXXXXXX K KK GQ+RDFDH+RWRKRTVA QLMYEGGGYAGFCSQSEGNEDTIEK LF A TTTKLVE IATGDNYSRCGRTDRGVSALGNV+TVS RSKFPK + D +LPTSPLGS+ V G EGS + + G EG ++R D + GGG GRG XXXXXXXXXXXXXX XXXXXXXXXXXXX E+TEIDYCG+LN+VLPP IRALAWAPVTEGFSARFSCSDRTYR YFF+ARD++I+AM+EAAS+IVG HDFRNLCKIDVANVSNFVR IK ASVRPV SPSP D+ GT EYYR+CVFEV
Sbjct: 62 APVPPQ-GPRGLSWREKQRQKAAEXXXXXXXXXXXXGRKSKKGAGQQRDFDHARWRKRTVAVQLMYEGGGYAGFCSQSEGNEDTIEKHLFRALTTTKLVESIATGDNYSRCGRTDRGVSALGNVITVSMRSKFPKHVPDADLPTSPLGSLWVAPIAPPQNAAKSVGENDGGFKRESQTMPEGSAAAEQEQPAAGGADEGSGLAK----------------------------------GKSSEGCPSDSRHPASGASDPCTAPGGGEVGRGEVASGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEITEIDYCGILNRVLPPGIRALAWAPVTEGFSARFSCSDRTYR----YFFMARDMNIKAMNEAASKIVGSHDFRNLCKIDVANVSNFVRHIKHASVRPVQSPSPSNTSDHEGTARGEEEEEYYRVCVFEV 502
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: D7FHT8_ECTSI (Pseudouridylate synthase 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT8_ECTSI) HSP 1 Score: 272 bits (695), Expect = 1.620e-82 Identity = 226/421 (53.68%), Postives = 246/421 (58.43%), Query Frame = 1
Query: 133 ARVPPAISARGLSWKEKQRXXXXXXXXXXXXXXVAG----KGKKKRGQERDFDHSRWRKRTVAFQLMYEGGGYAGFCSQSEGNEDTIEKRLFHAFTTTKLVERIATGDNYSRCGRTDRGVSALGNVVTVSARSKFPKEL-DVELPTSPLGSVRVVSGG---------GXXXXXXXXXXXXRDEGSGSXXXXXXXXXXXXXXXXXXRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGREGMEREARMGDVERSSGGGGR--GXXXXXXXXXXXXXXXXXXXXXSGGRECEASGQDASNGKATGEADKXXXXXXXXXXXXXKGDGTV----------EVTEIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKI 1317
A VPP RGLSW+EKQR XXXXXXXXX K KK GQ+RDFDHSRWRKRTVA QLMYEGGGYAGFCSQSEGNE+TIEK LF A TTTKLVE I TGDNYSRCGRTDRGVSALGNV+TVS RSKFPK + D +LPTSPLGS+ V G EGS + + G EA G+V R G XXXXXXXXXXXXXXXXXXXXX G + G XXXXXXXXXXXXX EVTEIDYCG+LN+VLPP +R LAWAPVTEGFSARFSCSDRTYR YFF+ARD+D++AM+EAAS+IVG HDFRNLCKI
Sbjct: 47 APVPPQ-GPRGLSWREKQRQKAAEXXXXXXXXXXXXXXGRKSKKGAGQQRDFDHSRWRKRTVAVQLMYEGGGYAGFCSQSEGNEETIEKHLFRALTTTKLVETITTGDNYSRCGRTDRGVSALGNVITVSMRSKFPKHVPDADLPTSPLGSLWVAPTAPPPNGAESVGEHDGAPKKENQTMPEGSAAAEQEQPAAGVAEEGSGLAK--------------------GKNSEGCPSDSRHQASGAPEPWTEAGGGEVGRGEVASGNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSEGERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEVTEIDYCGILNRVLPPGVRTLAWAPVTEGFSARFSCSDRTYR----YFFMARDMDVKAMNEAASKIVGSHDFRNLCKI 442
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A7S3H897_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H897_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.000e-31 Identity = 112/369 (30.35%), Postives = 152/369 (41.19%), Query Frame = 1
Query: 274 FDHSRWRKRTVAFQLMYEGGGYAGFCSQSEGNEDTIEKRLFHAFTTTKLVERIATGDNYSRCGRTDRGVSALGNVVTVSARSKFPKELDVE---LPTSPLGSVRVVSGGGXXXXXXXXXXXXRDEGSGSXXXXXXXXXXXXXXXXXXRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGREGMEREARMGDVERSSGGGGRGXXXXXXXXXXXXXXXXXXXXXSGGRECEASGQDASNGKATGEADKXXXXXXXXXXXXXKGDGTVEVTEIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVANVSNFVRFIKFASVR 1371
F S++R R +A Q+ Y+G Y GF SQ E+T+E LF+A KL+E T YSRCGRTD+GVSALG V++V+ RS P++L E + +P G + E A V +S G S + + SG++ K+ A G T +TE+DY +LN+ LP DIR L W VTE FSARFS SDR YR YFF + L+I AM +AA+ ++G+HDFRNLCK+D+ANV+NF R I A ++
Sbjct: 78 FSLSKYRTRQIAMQVQYDGSAYLGFASQDL--EETVENHLFNALLKLKLIEDRKTCQ-YSRCGRTDKGVSALGQVISVNVRSALPRDLPEEALVVLRNPTGKYEIT-----------------------------------------------------------------------------------EPAA----VNSTSSAGN-----------------------STAEQADNSGKEPPRKKSKKNATSDTPA----------GPKTKIITEMDYVTMLNRTLPDDIRILGWCEVTEEFSARFSASDRKYR----YFFPRKTLNIAAMQQAATYLLGNHDFRNLCKMDIANVTNFRRDIYSAEIK 319
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A7R9Y7Q5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7Q5_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.160e-30 Identity = 72/124 (58.06%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 1066 GDGTVEVTEIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVANVSNFVRFIKFASVRPVPSPSPDYGGTEYYRMCVFEV 1437
G+ T E EIDYCG+LN+VLP IR LAWAPVTE FSARFS R+YR YFF AR LD+ AMDEAA ++G HDFRN CK+DV NV NF R + A+VR V G RM VFEV
Sbjct: 149 GERTQEKREIDYCGLLNRVLPEAIRVLAWAPVTEDFSARFSAESRSYR----YFFSARGLDLSAMDEAARLLIGSHDFRNFCKMDVVNVRNFRRRVYRAAVRLVGHAEALAPGNSAPRMAVFEV 268
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A7L4DBW5_9AVES (PUS3 synthase (Fragment) n=2 Tax=Coraciiformes TaxID=8936 RepID=A0A7L4DBW5_9AVES) HSP 1 Score: 126 bits (317), Expect = 2.960e-28 Identity = 69/120 (57.50%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 1081 EVTEIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVAN-VSNFVRFIKFASVRPVPSPSPDYGGTEYYRMCVFEV 1437
E E+ Y +LN+VLPPDIRALAWAPV GFSARFSC RTYR YFF DLD++ M+ AA R VG HDFRNLCK+DVAN V NF R I A+V V + G + +R+C FEV
Sbjct: 160 EEEELRYTHILNRVLPPDIRALAWAPVEPGFSARFSCLKRTYR----YFFPCADLDVDLMNAAAQRYVGTHDFRNLCKMDVANGVVNFQRTILSAAVTWVERGGGETGLQDPFRLCQFEV 275
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: K7EAA9_ORNAN (Pseudouridine synthase 3 n=2 Tax=Monotremata TaxID=9255 RepID=K7EAA9_ORNAN) HSP 1 Score: 126 bits (316), Expect = 8.640e-28 Identity = 69/117 (58.97%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 1090 EIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVAN-VSNFVRFIKFASVRPVPSPSPDYGGTEYYRMCVFEV 1437
EI Y +LN+VLPPDIR LAWAPV GFSARF+C RTYR YFF DLD+EAMD AA + VG HDFRNLCK+DVAN V++F R I A VR V S + + +R+C FEV
Sbjct: 154 EIRYTHILNRVLPPDIRVLAWAPVGSGFSARFNCLQRTYR----YFFPRADLDLEAMDRAAQKYVGTHDFRNLCKMDVANGVTSFQRTILSAQVRRVDQ-SEETDRRDPFRLCQFEV 265
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A7L4MY80_9AVES (tRNA pseudouridine synthase (Fragment) n=1 Tax=Ceyx cyanopectus TaxID=390723 RepID=A0A7L4MY80_9AVES) HSP 1 Score: 121 bits (304), Expect = 1.070e-27 Identity = 67/117 (57.26%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 1090 EIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVAN-VSNFVRFIKFASVRPVPSPSPDYGGTEYYRMCVFEV 1437
E+ Y +LN+VLPPDIR LAWAPV GFSARFSC RTYR YFF +LD+E M+ AA R VG HDFRNLCK+DVAN V NF R I A+V V + G + +R+C FEV
Sbjct: 3 ELRYTHILNRVLPPDIRVLAWAPVEPGFSARFSCLQRTYR----YFFPCANLDVELMNSAAQRYVGSHDFRNLCKMDVANGVINFQRTILSATVTWVEKGG-ETGPWDPFRLCQFEV 114
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A401QE62_SCYTO (PseudoU_synth_1 domain-containing protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QE62_SCYTO) HSP 1 Score: 122 bits (306), Expect = 1.240e-27 Identity = 68/123 (55.28%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 1090 EIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVAN-VSNFVRFIKFASVRPVPSPSPDYGGT------EYYRMCVFEV 1437
E+ Y +LN+VLPPDIRAL WAPV FSARFSC RTYR Y+F LD+ MDEAA R G HDFRNLCK+DVAN V NF R + A V PVP P + GG Y MC EV
Sbjct: 136 ELRYTHILNRVLPPDIRALGWAPVGRDFSARFSCLHRTYR----YYFPGAGLDLARMDEAARRFEGAHDFRNLCKMDVANGVLNFRRTVLHARVGPVPPPGQEAGGACPGMRPSPYGMCQLEV 254
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A7E6CV69_9CHIR (tRNA pseudouridine(38/39) synthase isoform X2 n=2 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A7E6CV69_9CHIR) HSP 1 Score: 123 bits (309), Expect = 2.240e-27 Identity = 68/117 (58.12%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 1090 EIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVAN-VSNFVRFIKFASVRPVPSPSPDYGGTEYYRMCVFEV 1437
EI Y +LN+VLPPDIR LAWAPV GFSARFSC +RTYR YFF DLDI M+ AA + VG HDFRNLCK+DVAN V NF R I A V+ V + G E +++C FEV
Sbjct: 156 EIRYTHILNRVLPPDIRVLAWAPVEPGFSARFSCLERTYR----YFFPRADLDIVTMNCAAHKYVGTHDFRNLCKMDVANGVINFQRTILSAEVKLVGQSLAEDGRQEPFQLCQFEV 268
BLAST of mRNA_M-pyrifera_M_contig10890.1869.1 vs. uniprot
Match: A0A452EBW3_CAPHI (Pseudouridine synthase 3 n=5 Tax=Capra hircus TaxID=9925 RepID=A0A452EBW3_CAPHI) HSP 1 Score: 124 bits (310), Expect = 2.280e-27 Identity = 67/118 (56.78%), Postives = 80/118 (67.80%), Query Frame = 1
Query: 1087 TEIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDRTYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVAN-VSNFVRFIKFASVRPVPSPSPDYGGTEYYRMCVFEV 1437
TEI Y +LN+VLPPDIR LAWAPV FSARFSC +RTYR YFF +LDI M+ AA + VG HDFRNLCK+DVAN V+NF R I A V+ V + G E +++C FEV
Sbjct: 103 TEIRYTHILNRVLPPDIRVLAWAPVETSFSARFSCLERTYR----YFFPCANLDIVTMNYAAQKYVGTHDFRNLCKMDVANGVTNFQRTILSAQVQRVGQNLAEEGWQEPFQLCQFEV 216
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 273.5 |
Seed ortholog evalue | 1.9e-70 |
Seed eggNOG ortholog | 2880.D7FHT8 |
Preferred name | PUS3 |
KEGG ko | ko:K01855 |
Hectar predicted targeting category | other localisation |
GOs | GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 |
EggNOG free text desc. | mRNA pseudouridine synthesis |
EggNOG OGs | COG0101@1,KOG2554@2759 |
EC | 5.4.99.45 |
COG Functional cat. | J |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01000,ko03016 |
Exons | 6 |
Model size | 1437 |
Cds size | 1437 |
Stop | 0 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815598.9614246-CDS-M-pyrifera_M_contig10890:527..646 | 1622815598.9614246-CDS-M-pyrifera_M_contig10890:527..646 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 528..646 - |
1692277481.199786-CDS-M-pyrifera_M_contig10890:527..646 | 1692277481.199786-CDS-M-pyrifera_M_contig10890:527..646 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 528..646 - |
1622815598.9715884-CDS-M-pyrifera_M_contig10890:2834..2932 | 1622815598.9715884-CDS-M-pyrifera_M_contig10890:2834..2932 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 2835..2932 - |
1692277481.2123961-CDS-M-pyrifera_M_contig10890:2834..2932 | 1692277481.2123961-CDS-M-pyrifera_M_contig10890:2834..2932 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 2835..2932 - |
1622815599.014465-CDS-M-pyrifera_M_contig10890:4356..5081 | 1622815599.014465-CDS-M-pyrifera_M_contig10890:4356..5081 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 4357..5081 - |
1692277481.2224123-CDS-M-pyrifera_M_contig10890:4356..5081 | 1692277481.2224123-CDS-M-pyrifera_M_contig10890:4356..5081 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 4357..5081 - |
1622815599.0266569-CDS-M-pyrifera_M_contig10890:6597..6735 | 1622815599.0266569-CDS-M-pyrifera_M_contig10890:6597..6735 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 6598..6735 - |
1692277481.2399588-CDS-M-pyrifera_M_contig10890:6597..6735 | 1692277481.2399588-CDS-M-pyrifera_M_contig10890:6597..6735 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 6598..6735 - |
1622815599.036244-CDS-M-pyrifera_M_contig10890:7772..7982 | 1622815599.036244-CDS-M-pyrifera_M_contig10890:7772..7982 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 7773..7982 - |
1692277481.2525735-CDS-M-pyrifera_M_contig10890:7772..7982 | 1692277481.2525735-CDS-M-pyrifera_M_contig10890:7772..7982 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 7773..7982 - |
1622815599.0453143-CDS-M-pyrifera_M_contig10890:8105..8252 | 1622815599.0453143-CDS-M-pyrifera_M_contig10890:8105..8252 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 8106..8252 - |
1692277481.2703207-CDS-M-pyrifera_M_contig10890:8105..8252 | 1692277481.2703207-CDS-M-pyrifera_M_contig10890:8105..8252 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10890 8106..8252 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10890.1869.1 >prot_M-pyrifera_M_contig10890.1869.1 ID=prot_M-pyrifera_M_contig10890.1869.1|Name=mRNA_M-pyrifera_M_contig10890.1869.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=479bp
GDSGGSGDGASASADVAAAETSSEVSATAPSSFGVSGVPSGFDGARVPPA ISARGLSWKEKQRRKKVVAAAAAAAGVVAGKGKKKRGQERDFDHSRWRKR TVAFQLMYEGGGYAGFCSQSEGNEDTIEKRLFHAFTTTKLVERIATGDNY SRCGRTDRGVSALGNVVTVSARSKFPKELDVELPTSPLGSVRVVSGGGSG GGDGGGGGGGRDEGSGSDGGGGDGGDGGGGVEGGDRTSGAEGPGAVLGGD AETSAEGGKAATDGDGARSVGDGREGMEREARMGDVERSSGGGGRGGGGG DGAGGGDGGGEGVGGDASGGRECEASGQDASNGKATGEADKKAKKSKKKD KKKKKGDGTVEVTEIDYCGVLNKVLPPDIRALAWAPVTEGFSARFSCSDR TYRQEKAYFFLARDLDIEAMDEAASRIVGHHDFRNLCKIDVANVSNFVRF IKFASVRPVPSPSPDYGGTEYYRMCVFEV back to topmRNA from alignment at M-pyrifera_M_contig10890:528..8252- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig10890.1869.1 ID=mRNA_M-pyrifera_M_contig10890.1869.1|Name=mRNA_M-pyrifera_M_contig10890.1869.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7725bp|location=Sequence derived from alignment at M-pyrifera_M_contig10890:528..8252- (Macrocystis pyrifera P11B4 male) GGCGATAGCGGCGGCAGCGGCGACGGCGCCTCCGCCTCGGCGGACGTGGC
CGCTGCAGAAACAAGTAGTGAGGTGTCTGCAACGGCACCTTCGAGTTTTG
GTGTTTCTGGGGTACCTTCCGGGTTCGACGGTGCCAGGGTACCTCCGGTG
TTAGTCGCTGCTGTTAGTAGGGTACCTTCGGTGGTAGATGCTACTGGAAT
ACCTCCTGGGGTACCTTCTTCGGTGCTAGATCCTGCTCGGGTATCTTCTG
GGTTAGAGTTGGGTGCCGAGGCAATTTCTGCGCGAGGGCTCTCCTGGAAG
GAGAAGCAGCGACGGAAGAAGGTGGTGGCAGCGGCAGCGGCGGCTGCGGG
TGTTGTGGCCGGCAAGGGCAAGAAGAAGAGGGGGCAGGAGCGCGACTTCG
ACCACTCGCGGTGGCGAAAGAGAACCGTGGCGTTTCAACTCATGTACGAA
GGGGGAGGCTACGCCGGCTTTTGCTCCCAGGTGTGGTGATGTTAGTGGTG
TTGGTGGTGTTAGTGTTGATGTTGGTGATGGTGGTGGTGGCGATGGTGGT
GACGATGGGGGGGGAGGGAGGTCTACTGCCTCATTATACTCCGATCGCTT
TTCAGATGACTACTCGTATCTTGACTGATTTTCACTCTACAGTTTGATAG
CTCTGACTGGTGTTGTCATATTTGCGTCCGGGTTGGTTTTCAGAGTTTCT
CACAGGTACAATAGTTTGGCCTCAAGATACGTGCCATATCGGACACCCCC
GGATTGCTGCTGCTGTGCTGCGTTTTGCCTGGAGACAGGTGATGCAGCGT
CGAAGCTTTTTGAAGCTCTACGATTGGCTCATTGCTCGAAAACTTGACCT
CTGTCAGATTTGAGCCCACAAAGTGCGAGTATCGACCGCTTGTGTGCATC
GCATGATATGAGCGCTTTTTTGCGTGGGCGTCTTTCATGGCCCCGAAGCG
CAAGACCAAGAAGAACGTTGAATGTACTCAGCGAGGTCGACGGGAGAAGG
GCGTACGGTCAAAACATCGGACCTATAGCAGTACAGAGGAGTACCCGATT
GAAGAGCCCCTCGGAACAAGCCAGTTTACCGCTCTTACCTTCGAGCCGCC
AGTATCCCCGTTTCAGTCAGATCGATTTCATGTTCTCCCGGGATAAGAGC
GCAACTCTCTCTTTGAGCAGAATATATGTATTCCTGCTTGGAGAGTGCAA
AGTTCGTAAAGCGGGAAAAGTCGTGCGAAACCTGGATGTTGAAGATTCCC
TGCCAAGCCGAGTTTACCGCTCTTGAGTCCGTTTTCTCTTGTTATGGACG
CTCTTAAGTCGGGTACTCCACTGCAGTGGTGTAGAGTAGCTCTAGACTCA
TCTGTGGCCCCCTTTGGACCTCTCTTATTATGGGGATAAAAGCTACAGGG
AATTAGAGTTGGGTCACTTTTGAACAAATGACGAACTAGGTAAGCCTGTA
CCAAATTTTTAACGGTACCTTGTTTTGAACAACCCTTCTCGAAACTCCTC
TGTTGCCTGGCCTGCAGAGCGAGGGGAACGAGGACACGATCGAAAAGCGC
CTCTTCCATGCCTTCACCACGACCAAGCTCGTCGAACGAATCGCGACCGG
AGATAATTACTCCCGCTGCGGCCGGACGGACCGGGGAGTCAGCGCGCTTG
GGAACGTGAGTGGTTCGATTTTTTTTTTCGGATGACCATATGCTGTCACG
CTCTTACGGTTACAGCAACAACGAAATGTAGTAAATGTAGTACCTGTGGT
AGCGGTCGTAGTACTAGTACTAGTACTAGTACCAGTACTGTAGTAGTAGC
AGTAGTAGTAGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAAGTAGCAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGCAGCAGCAGCAGTAGCATA
GCAGTAGAAGTAGCAGTGGTATTACGGGGGTCCATAGTTAATAGGACATG
TAGTATACATAAAAAAAACTATATAGTTACCTATGTTTACTAACAATATT
TGGTCCTATTTACTATGGTCCCCCGTAATAGTAGTAGCAGTAGCGGTAGC
AGGAGCAGTAGCAGTAGCAGTAGTAGCAGTACTATTTGTAGCAGTAACAG
TAGTAGTTAAAGCAACTGCCTACTGAGTTACCCGGGGTGAAACCTCAACA
GGTTATACAGTCCATGGTATGCCTTACACCGTTCGCCCTCGGCAACTCCG
TCGAATAACCGCACGCTGGTGTGTGCGAGCAAAGTCAACCCATTTACCTT
CACGAAAACATGACGAATACTCCGGAAATTGCCTTACTCTGATTCCAAGT
AATTGGAAGGTGGGTGCAGTTGTTGGAATGGGGCTAGGGTTGTTGAAACA
AAATCTCCAGCTAGTTTCTCGAAAGCACGGTACTGCTGTGACTCTCTTGG
GGTACAATATCATGCATGGAAGTTAGGCATCGCGGGGTTGCCATGCATGA
AATACAATTGTCGTGAGCTCTGTATCATCCCATGCGCGGTACCTAGTCAT
CGTTTTATTGAGTTTAATAGATTGATTCTTAGCTGCTTAAAGTTGAGGCA
CAGTCAGTAAGTACACGTAAACCGTGTGATACTTCTGTGACACTTCCACA
CGACGGACACATCACAATCTGGATCACCCAGATCATCTTGATCGTGTAGA
CCCTTACCTGCCGTTATGAATACCTGTGCAGGATCTATCTGCGTAGTACA
GATCCAACCCAGGAAACCTGTGCTAGATCATGCGGATTGTTCGGCTCCCA
CCCAGCAACATGAGCTGTAGAGCATACAGATCATACAGATCATACAGATC
AGGGGTCTATCTGCCCTGAAAGATCATCAGGTGGGAATCGACTATCTGTC
CGATCCATGGACACTTGGATTTTTTTTTTCTTCATATTTTGTTCGTTGGC
GACTTTCGAGGCGTCGAACTTGCCTACCCCAACCTGCAGCACGCCAGGCA
GACCCGAGCAGCAAAAATATCAGACAAGGGGGAACAATTAACAAACGCTT
TGAGGCGAAACTGTTTGACGGTTTCATATGTTCTAACCCAACCAAACAGG
GTTATCGCAAACAATTTGATACAACCAGGGAGACGGGTAGATACAACGTT
GACCAGCATTGTGAAACTCTCGACCCCCCCCCACCCCCCCCCTCCTGTTT
CACGCACACCGGGGGAGGCAGGTCGTCACGGTATCCGCACGCTCAAAGTT
CCCCAAAGAGCTGGACGTCGAGCTACCGACGTCACCCCTTGGCTCCGTGC
GCGTGGTTAGCGGCGGTGGCAGCGGTGGTGGTGATGGTGGGGGGGGCGGC
GGTGGGCGTGATGAAGGTAGTGGTAGCGATGGTGGTGGTGGTGATGGTGG
TGATGGTGGTGGTGGTGTTGAAGGTGGTGACCGGACAAGTGGGGCAGAAG
GACCAGGAGCAGTGCTGGGAGGCGATGCCGAAACCTCAGCTGAGGGTGGA
AAGGCGGCCACTGACGGCGATGGAGCTCGTTCCGTCGGCGATGGCAGGGA
GGGGATGGAGCGTGAAGCGAGAATGGGTGACGTGGAGAGAAGTAGCGGCG
GGGGTGGGAGAGGCGGCGGCGGCGGCGACGGTGCTGGTGGGGGCGACGGT
GGGGGAGAGGGTGTGGGTGGGGACGCGAGTGGGGGGCGGGAGTGCGAAGC
GAGCGGACAGGACGCGAGCAACGGCAAAGCCACTGGTGAAGCCGACAAGA
AAGCCAAGAAGTCGAAGAAGAAGGACAAGAAGAAAAAGAAAGGAGACGGG
ACCGTCGAGGTAACCGAGATCGACTACTGCGGCGTGCTCAACAAGGTGCT
GCCGCCCGATATTCGCGCGCTAGCATGGGCGCCCGTAACAGAGGGTTTCA
GCGCGCGGTTCAGCTGTTCCGACCGAACCTACAGGCAAGAAAAAGCGTAC
ACGAAAGTATCACCATGCTGCGCGTGTCTTACGTGCGTACAGCTTCTTAC
ATTGCATTTCGGACACACGCCCTGATACCACCGCAGCTCGGGCTGCTTCA
CGTGGTCAAGCGCTGCGTTTCTTTTTTCTTTGTTTGCGCGCAAGGCGAAC
GGGGAGGGGGGGGGGGGGGGGGGGGGAAGGGGGGGGTTTTGTCCCGGGGT
GGGGGGTTTGTGTTTTGGGGGGGTTTTGGGTTTTTTTCCCTCGGGNNNNN
NNNNNTGTTTTTGGGGGGGGTGCGCGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGCAACGGGGGAGCTTTTGCTCCGGAAGAGGCGTT
TCTGTTCTGTGTGTGTCTTGTGTTTTTCTGCCTACGAGCAGTTGCGACGA
ACTAGAAAACGTTGGAAGAGCCCGCGGCATTGATTGTGGTTTCGCCTTTT
TTATCTTCATCACAAAACAAACGTTTTTTTTTTTTAGCCGACTTGCTTTT
GCTCTTCCGTTAGTTTTTGCTGCTACAACTTTAGCTGCGGCTGAGACGAT
GCGGTCGCCTCGACACAAAAGGTTGGAGTGTATGCAGTCTCCGTTGCCGT
TTGCTTCATTTTCCCCCGACGGTTTCGTCGACTTGATGATGGAGGCTCGT
TTGTCCCCCGTATGGGATGCGGGGAGCGGGGAGCGGGGAGCGGGGAGCGG
GGAGCGGGGAGACGCTTAGATTCCTTGTCTGTGGCTTCACCCTCGAGGTT
GTTCTGACGCGTGATCGATCCTAGGCACGGCCCCGCTCGAGGCAACACCA
CGGGTGTTCTCACCACGCTGAGGCCGATTGCGTGCCGATTTTTTGTGGTG
GAAACCCTGGCAGCGATCTCCCCCAACCCCCTGATTTTTTTGTTTTTGTT
GTTTTTGGGGGGGGTAGTTTGCTCAGGCAATAGCCTCAATGTGGATACCG
GATCCTGCCCCTTGTATGGTACCGCCTCGCTACCACTACAAGCCTTCGTA
GTCCTGTCACCTCGCCAGCGTCACCCCGAGACTATTTTCGTTGCCGACCC
CTTCACCCCCCTGGCCTCTATGTTGGGGTCAGCCCAATGCACCCTGTGAC
TGCTTCAAGGGATAGTTATACATACACCTGGTATACATTTATATATTTAC
GGTGATGAGAGCCCACAGCGGACCCGAACACCCGACGTTACCCTAATGTG
CCCACCTCTAGTTCTGATTACCACCGTACGTTCCCCCCGTAACAGTGCAA
AAGGGTGATCCTGCTCTTTTTCCAATTAGTTTAGCCCCAAAAATGTTGCG
GCAGCAAGTCTAAAGGGGGGTCAATAAACCTATTCTTCAGCAAACCCTTG
CTCTGTGTGTGTGTGTGTGTTTTTTTTTTCTCCTGATGCTGGGACTGGAA
CGTCTTGTTGGGATTAGCAGGTACTTTTTCTTGGCGAGGGACCTGGACAT
CGAGGCGATGGACGAGGCGGCTTCGCGCATCGTGGGGCACCACGACTTCC
GGAACCTCTGCAAGATAGGTGACGTAACCCCCCCCCTCACTAAGACAAGC
AACAAATGAGTACGCCCCCTCCCTCCCCCCACCTCTGGCCACACCAAAAA
ACAAATCATTTTTTTTCGAAGCTGTCGTCCGCATGCAAGTCCGCCTCACA
AGCGGCTCTTGGTGGAATGAAGATCAATCACCCTTCATGCGACTCGCCCA
ACACCTCACGGCGCTTCGTGCTTGGCGCAAGCAGTGTCTGGCCTGGTCGA
TGAAAAACTGAAAACCCGATGTGCTCCGTCCCTGCATTGTAGGGGTGCTA
GGGTCTATGGTCATTCGACTACGGCCATGTTGTTGTTCTCTCACATTAAC
TCTCAAACGAAGGAGTCCGTGGTCACAATAAAAGGTGCTGGAGCCCTGGG
AATATCCGAAATACCACAAAAAATCGAAATTCCCGCTGCCTAAAAAATAC
ACGAGACGAAGAAGGCGCACACAAGATCAAATCACTGTGCAAACTGAACT
ATGACGGGGGTCTATATATAGTTAACAGGACCTATGGCATACATACAAAA
TTATATATTTAGGTATTTTTACTAGAAATTTTTGGTCCTGTTTACTATGG
TCCCCCGTAATAACATGGCCGCGGGTATATCCTCTCAACTACAGCATAGA
GTCGCCCCCGTTCCCACAAGTAACCAACTCGTGGCTGCTGACTACGGCGG
CTGCTGTCTGGAGTGCTGCCTGCACCGTACGAAACGCACGGTAGTCGTGA
ACACAGAGAGGAACACGCCTGCTGTCTGGGGTGTTGTCAGGGTGACGACT
CGCGGACATGGAGTGAAAAGGGAGCAAAAGAACCTAAAACCACCGTACAA
ATATCAACGATCGATCGCCATCTCTTCCCGGGCTGTCTGACAAAAAAGGT
GCAGCACAGCTATGATACCACGTCCCTGATGATTGCGGGGGTCATTCCCC
ATGAAGGGTATACAACTCGCCAACACTACAAATACCAGCGACGTTAGTAA
CAAGTGCATACTACTGCCTCGTGGAGATCAGAAACCAGAAAGATACGATG
GCTTGCTTCTGTCGTGATGGTGTGCGCGCTGGTCATGGGCCTCCGTGTGC
CGTCCTGCTGCCGCTCTTCATGGCCGCCTAATCGCCTTTTAGCCCCATCC
GCCCGCTCCTTTGCACGTGCTCTCGCTGCCACTCCCTTCCAGTCGGTTCC
CTTTCTCCCCCGTCCCGAAAGACGAATGCTCCTCGCACTTGCGGTTCTGA
TCTGAAAAACAAAAATTCTCGTGCAGGGTGAGTGCAATCCGTCTGTTCTG
CGCTCGTCGATGCTCTCCCTCTCTCTGTCTCCCTCCTCCTTCATCTTAGA
ATCCAGCCTCCTACCGGGGCAATAGACTGCCGTAGTTTGGCGTGTGGTAG
CACCTGCCTCCGCGCACGGACATCCCGATTGAGCATTGCTGCTCTGCCGC
TGCTGCCTGAAAAAAGACGCGCGAATCGTATTAGTAGGTCTCCGGGCCTG
ACGCACCACGTACGACCCAACTCTACTGCCGCCTGAGCCTCGCGGTCACA
CGCAGCAGCAAGAAAGTATCACTCCTTGAGGGTGAGTCCGGCCTTACCCT
TACACCCGCCAGAAAGACCTACCCCACTCGCTATAAACCTGATAGGGCAT
GCCTCGCAGCATGCCTTGCCGAAGCAGCAAAGGGAACGGAGTTGTATGAC
AGTGAGTACCGCCGCCCCCCCCCCCCCCCCCCCGGCCTCGTCACCGTTCC
CTCCGCACGTCCGTGTCTCCTCCCGTACGTGTGCTTCTTTTTTTCGGCAG
AAGTCGCGCTCACGCTGTACTCATAGCCGATTGATTGTTGATTAAACCAA
ACTATTTTTTTTCTCTTTTTTTTGGCGACCTCTTGCCCCCAAGAGGTCCG
TGGAGATCATTGACCCCCCCCCCCCCACAGAGGATAAGGTTTATAAGCAA
AACCAAAATAACTTCATATATATGGTGAAAACGTGTTGAACGCCTAAATT
TTGAAGGTGTCCCTATTAGGAGAAAAAACGGTGCTCCGTTGCGGATGGGA
TGCGTGGTCAAAGGTCAAATGACTGAGGCAAGCCCCAAATGAGCCCGCTC
CCCCCCCCAACGCCCTCCCCCTCCTCCCCCGGCCCCTTCCCTTCTCCGTG
CATCCGCATGTCCCTTGCGCCTCTTTTTTGTTTTCCTGGGAATGCTTTGT
CGGCAGATGTTGCAAACGTGAGCAATTTTGTGAGGTTCATCAAATTCGCC
TCCGTGAGGCCGGTACCGTCGCCGTCCCCGGACTACGGCGGGACCGAGTA
CTATCGGATGTGCGTATTTGAGGTG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig10890:528..8252- >mRNA_M-pyrifera_M_contig10890.1869.1 ID=mRNA_M-pyrifera_M_contig10890.1869.1|Name=mRNA_M-pyrifera_M_contig10890.1869.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2874bp|location=Sequence derived from alignment at M-pyrifera_M_contig10890:528..8252- (Macrocystis pyrifera P11B4 male) GGCGATAGCGGCGGCAGCGGCGACGGCGCCTCCGCCTCGGCGGACGTGGC CGCTGCAGAAACAAGTAGTGAGGTGTCTGCAACGGCACCTTCGAGTTTTG GTGTTTCTGGGGTACCTTCCGGGTTCGACGGTGCCAGGGTACCTCCGGGC GATAGCGGCGGCAGCGGCGACGGCGCCTCCGCCTCGGCGGACGTGGCCGC TGCAGAAACAAGTAGTGAGGTGTCTGCAACGGCACCTTCGAGTTTTGGTG TTTCTGGGGTACCTTCCGGGTTCGACGGTGCCAGGGTACCTCCGGCAATT TCTGCGCGAGGGCTCTCCTGGAAGGAGAAGCAGCGACGGAAGAAGGTGGT GGCAGCGGCAGCGGCGGCTGCGGGTGTTGTGGCCGGCAAGGGCAAGAAGA AGAGGGGGCAGGAGCGCGACTTCGACCACTCGCGGTGGCGAAAGAGAACC GTGGCGTTTCAACTCATGTACGAAGGGGGAGGCTACGCCGGCTTTTGCTC CCAGGCAATTTCTGCGCGAGGGCTCTCCTGGAAGGAGAAGCAGCGACGGA AGAAGGTGGTGGCAGCGGCAGCGGCGGCTGCGGGTGTTGTGGCCGGCAAG GGCAAGAAGAAGAGGGGGCAGGAGCGCGACTTCGACCACTCGCGGTGGCG AAAGAGAACCGTGGCGTTTCAACTCATGTACGAAGGGGGAGGCTACGCCG GCTTTTGCTCCCAGAGCGAGGGGAACGAGGACACGATCGAAAAGCGCCTC TTCCATGCCTTCACCACGACCAAGCTCGTCGAACGAATCGCGACCGGAGA TAATTACTCCCGCTGCGGCCGGACGGACCGGGGAGTCAGCGCGCTTGGGA ACAGCGAGGGGAACGAGGACACGATCGAAAAGCGCCTCTTCCATGCCTTC ACCACGACCAAGCTCGTCGAACGAATCGCGACCGGAGATAATTACTCCCG CTGCGGCCGGACGGACCGGGGAGTCAGCGCGCTTGGGAACGTCGTCACGG TATCCGCACGCTCAAAGTTCCCCAAAGAGCTGGACGTCGAGCTACCGACG TCACCCCTTGGCTCCGTGCGCGTGGTTAGCGGCGGTGGCAGCGGTGGTGG TGATGGTGGGGGGGGCGGCGGTGGGCGTGATGAAGGTAGTGGTAGCGATG GTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGTGTTGAAGGTGGTGAC CGGACAAGTGGGGCAGAAGGACCAGGAGCAGTGCTGGGAGGCGATGCCGA AACCTCAGCTGAGGGTGGAAAGGCGGCCACTGACGGCGATGGAGCTCGTT CCGTCGGCGATGGCAGGGAGGGGATGGAGCGTGAAGCGAGAATGGGTGAC GTGGAGAGAAGTAGCGGCGGGGGTGGGAGAGGCGGCGGCGGCGGCGACGG TGCTGGTGGGGGCGACGGTGGGGGAGAGGGTGTGGGTGGGGACGCGAGTG GGGGGCGGGAGTGCGAAGCGAGCGGACAGGACGCGAGCAACGGCAAAGCC ACTGGTGAAGCCGACAAGAAAGCCAAGAAGTCGAAGAAGAAGGACAAGAA GAAAAAGAAAGGAGACGGGACCGTCGAGGTAACCGAGATCGACTACTGCG GCGTGCTCAACAAGGTGCTGCCGCCCGATATTCGCGCGCTAGCATGGGCG CCCGTAACAGAGGGTTTCAGCGCGCGGTTCAGCTGTTCCGACCGAACCTA CAGGCAAGAAAAAGCGTCGTCACGGTATCCGCACGCTCAAAGTTCCCCAA AGAGCTGGACGTCGAGCTACCGACGTCACCCCTTGGCTCCGTGCGCGTGG TTAGCGGCGGTGGCAGCGGTGGTGGTGATGGTGGGGGGGGCGGCGGTGGG CGTGATGAAGGTAGTGGTAGCGATGGTGGTGGTGGTGATGGTGGTGATGG TGGTGGTGGTGTTGAAGGTGGTGACCGGACAAGTGGGGCAGAAGGACCAG GAGCAGTGCTGGGAGGCGATGCCGAAACCTCAGCTGAGGGTGGAAAGGCG GCCACTGACGGCGATGGAGCTCGTTCCGTCGGCGATGGCAGGGAGGGGAT GGAGCGTGAAGCGAGAATGGGTGACGTGGAGAGAAGTAGCGGCGGGGGTG GGAGAGGCGGCGGCGGCGGCGACGGTGCTGGTGGGGGCGACGGTGGGGGA GAGGGTGTGGGTGGGGACGCGAGTGGGGGGCGGGAGTGCGAAGCGAGCGG ACAGGACGCGAGCAACGGCAAAGCCACTGGTGAAGCCGACAAGAAAGCCA AGAAGTCGAAGAAGAAGGACAAGAAGAAAAAGAAAGGAGACGGGACCGTC GAGGTAACCGAGATCGACTACTGCGGCGTGCTCAACAAGGTGCTGCCGCC CGATATTCGCGCGCTAGCATGGGCGCCCGTAACAGAGGGTTTCAGCGCGC GGTTCAGCTGTTCCGACCGAACCTACAGGCAAGAAAAAGCGTACTTTTTC TTGGCGAGGGACCTGGACATCGAGGCGATGGACGAGGCGGCTTCGCGCAT CGTGGGGCACCACGACTTCCGGAACCTCTGCAAGATAGGTACTTTTTCTT GGCGAGGGACCTGGACATCGAGGCGATGGACGAGGCGGCTTCGCGCATCG TGGGGCACCACGACTTCCGGAACCTCTGCAAGATAGATGTTGCAAACGTG AGCAATTTTGTGAGGTTCATCAAATTCGCCTCCGTGAGGCCGGTACCGTC GCCGTCCCCGGACTACGGCGGGACCGAGTACTATCGGATGTGCGTATTTG AGGTGATGTTGCAAACGTGAGCAATTTTGTGAGGTTCATCAAATTCGCCT CCGTGAGGCCGGTACCGTCGCCGTCCCCGGACTACGGCGGGACCGAGTAC TATCGGATGTGCGTATTTGAGGTG back to top
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