mRNA_M-pyrifera_M_contig107654.1635.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A517PKR8_9PLAN (UDP-glucose 4-epimerase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PKR8_9PLAN) HSP 1 Score: 409 bits (1050), Expect = 3.470e-142 Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF+VTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKS+ FEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL
Sbjct: 11 GFIGFHVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSDQFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A518A3T0_9PLAN (UDP-glucose 4-epimerase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A3T0_9PLAN) HSP 1 Score: 372 bits (954), Expect = 1.390e-127 Identity = 181/205 (88.29%), Postives = 194/205 (94.63%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF+VTSQLLA GH+VTGIDNLNSHYSVQLK+DRLQ+LQ+S F+F EI+L DVAAFD+LF+ FDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCR+ ++ HLVYASSSSVYGANKKTPYAT DPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVH+FTKAILEGTPIKVFNHGNL
Sbjct: 11 GFIGFHVTSQLLAGGHRVTGIDNLNSHYSVQLKRDRLQLLQESEQFQFEEIELADVAAFDRLFDGDPFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRQSRIAHLVYASSSSVYGANKKTPYATDDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHLFTKAILEGTPIKVFNHGNL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A517RD83_9PLAN (UDP-glucose 4-epimerase n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RD83_9PLAN) HSP 1 Score: 343 bits (880), Expect = 2.390e-116 Identity = 165/205 (80.49%), Postives = 184/205 (89.76%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF++TS+LL+QGHQVTG+DNLNSHY V LK+DRLQ +Q + F+F E D+ DVA ++F+Q FDKVIHLAAEVGVRNSLLKPLEYVQSNV+GFVN+LE CR QV H+VYASSSSVYGAN+KTPY+T D VDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAV +FTKAILEGTPIKVFNHGNL
Sbjct: 11 GFIGFHITSKLLSQGHQVTGVDNLNSHYDVALKRDRLQQIQPESGFQFQEADVTDVATMSRIFQQSGFDKVIHLAAEVGVRNSLLKPLEYVQSNVLGFVNVLEQCRLSQVAHVVYASSSSVYGANRKTPYSTQDRVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVFLFTKAILEGTPIKVFNHGNL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A3D3RFA8_9PLAN (Capsular biosynthesis protein CpsI n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3RFA8_9PLAN) HSP 1 Score: 338 bits (867), Expect = 2.260e-114 Identity = 162/205 (79.02%), Postives = 183/205 (89.27%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF+VT++LL+QGH+VTG+DNLNSHY V+LK+DRL L++ FEF E D+ DV + LF Q F KVIHLAAEVGVRNSLLKPLEYVQSNV+GFVNLLE CR +V+H+VYASSSSVYGAN+K PY+THD VDHP+SLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAV++FTKAILEGTPIKVFNHGNL
Sbjct: 11 GFIGFHVTARLLSQGHRVTGVDNLNSHYDVRLKRDRLAELRQFETFEFHEADITDVESLSHLFVQNPFQKVIHLAAEVGVRNSLLKPLEYVQSNVLGFVNLLEQCRLKEVEHVVYASSSSVYGANRKIPYSTHDAVDHPISLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVYLFTKAILEGTPIKVFNHGNL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A355G8F4_9PLAN (Capsular biosynthesis protein CpsI n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G8F4_9PLAN) HSP 1 Score: 335 bits (859), Expect = 3.700e-113 Identity = 163/205 (79.51%), Postives = 181/205 (88.29%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF+V+++LLAQGHQVTGIDNLN HY V LK+DRL LQK + F+F E D+ DVA LF Q KVIHLAAEVGVRNSLLKPLEYVQSNV+GFVNLLE CR +++H+VYASSSSVYGAN+K PY+THD VDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAV++FTKAILEGTPIKVFNHG+L
Sbjct: 11 GFIGFHVSARLLAQGHQVTGIDNLNRHYDVGLKRDRLAELQKYSAFQFHEGDITDVACLSNLFSQNSCQKVIHLAAEVGVRNSLLKPLEYVQSNVLGFVNLLEQCRLKKIEHVVYASSSSVYGANRKIPYSTHDAVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVYLFTKAILEGTPIKVFNHGDL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A518IA77_9PLAN (UDP-glucose 4-epimerase n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IA77_9PLAN) HSP 1 Score: 335 bits (859), Expect = 3.700e-113 Identity = 162/205 (79.02%), Postives = 182/205 (88.78%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF+VTS+LL+ GHQVTG+DNLNSHY VQLKQ R+ +Q + F+F E D+ D + ++F+Q F+KV+HLAAEVGVRNSLLKPLEYVQSNV+GFVN+LE CR QV HLVYASSSSVYGAN+KTPY+THD VDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAV +FTKAILEGTPIKVFNHGNL
Sbjct: 11 GFIGFHVTSKLLSLGHQVTGVDNLNSHYDVQLKQARINQIQHDSSFQFIETDITDTDSMLRVFDQAAFEKVVHLAAEVGVRNSLLKPLEYVQSNVLGFVNILELCRIHQVAHLVYASSSSVYGANRKTPYSTHDRVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVFLFTKAILEGTPIKVFNHGNL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A517VAR8_9PLAN (UDP-glucose 4-epimerase n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VAR8_9PLAN) HSP 1 Score: 332 bits (850), Expect = 8.630e-112 Identity = 156/205 (76.10%), Postives = 181/205 (88.29%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF+V++++L+QGH+VTG+DNLNSHY V LK DRL LQ+ F+F E D+ DV QLF + F KV+HLAAEVGVRNSLL+PLEY+QSNV+GFVNLLE CR +++H+VYASSSSVYGAN+K PY+THD VDHPVSLYAATKR+DELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAV++FTKAILEGTPIKVFNHGNL
Sbjct: 11 GFIGFHVSARMLSQGHRVTGVDNLNSHYDVSLKLDRLAELQQYPTFQFHEADITDVECLSQLFNESSFQKVVHLAAEVGVRNSLLRPLEYIQSNVLGFVNLLEQCRLKEMEHVVYASSSSVYGANRKIPYSTHDAVDHPVSLYAATKRSDELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVYLFTKAILEGTPIKVFNHGNL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A517VZR4_9PLAN (UDP-glucose 4-epimerase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZR4_9PLAN) HSP 1 Score: 329 bits (843), Expect = 9.980e-111 Identity = 157/205 (76.59%), Postives = 181/205 (88.29%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF+V S+LL+QG+ V GIDNLN+HY VQLK+DRLQ LQ+ F+F E ++ DV + QLF+Q F+KV+HLAAEVGVRNSL +PL+YVQSNV GFVNLLE+CR+ QV+H VYASSSSVYGAN+KTPY+T D VDHP+S+YAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAV +FTKAILEGTPIKVFNHG L
Sbjct: 11 GFIGFHVASRLLSQGYHVVGIDNLNAHYDVQLKRDRLQELQQEQAFQFLETNITDVKSISQLFQQFTFEKVVHLAAEVGVRNSLERPLDYVQSNVGGFVNLLEYCREAQVRHFVYASSSSVYGANRKTPYSTSDRVDHPISIYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVFLFTKAILEGTPIKVFNHGKL 215
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: A0A1X4GAP1_9CYAN (NAD-dependent epimerase n=4 Tax=Cylindrospermopsis raciborskii TaxID=77022 RepID=A0A1X4GAP1_9CYAN) HSP 1 Score: 283 bits (723), Expect = 1.370e-92 Identity = 133/205 (64.88%), Postives = 165/205 (80.49%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIGF++T+ LL QG V GIDNLN++Y V LKQ RL+ LQ + LF FA ++L D D+LF + +FD V++LAA+ GVR SL P Y+ SN+VGF N+LE CR QV+HLV+ASSSSVYGAN K P++THD VDHP+SLYAATK+A+EL+AH+YSHLY LPTTGLRFFTVYGPWGRPDMA+ +FTKAIL G PI+VFN+G +
Sbjct: 10 GFIGFHLTNYLLRQGETVIGIDNLNNYYDVSLKQARLEQLQPNKLFTFAHVELADQQGIDKLFTEHEFDAVVNLAAQAGVRYSLKNPHAYINSNIVGFTNILESCRHHQVKHLVFASSSSVYGANTKVPFSTHDNVDHPISLYAATKKANELMAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILSGEPIEVFNYGKM 214
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Match: UPI000426C5BE (NAD-dependent epimerase n=1 Tax=Azovibrio restrictus TaxID=146938 RepID=UPI000426C5BE) HSP 1 Score: 281 bits (720), Expect = 3.910e-92 Identity = 134/205 (65.37%), Postives = 161/205 (78.54%), Query Frame = 1
Query: 1 GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEIDLVDVAAFDQLFEQQQFDKVIHLAAEVGVRNSLLKPLEYVQSNVVGFVNLLEHCRKGQVQHLVYASSSSVYGANKKTPYATHDPVDHPVSLYAATKRADELIAHSYSHLYDLPTTGLRFFTVYGPWGRPDMAVHIFTKAILEGTPIKVFNHGNL 615
GFIG NV+ +LL +G QV G+DNLN +Y QLK+DRLQ L+ F F ++D+ D +QLF ++FDKV+HLAA+ GVR SL P Y+ SN+VGF N+LE CR QV HL YASSSSVYG N K P++ HD VDHPVSLYAATK+A+EL+AH+YSHLY LPTTGLRFFTVYGPWGRPDMA+ +FTKAILEG PI VFNHGN+
Sbjct: 10 GFIGSNVSRRLLERGDQVVGLDNLNDYYDPQLKRDRLQRLEPQAGFSFVKLDVADRPGMEQLFAAEKFDKVVHLAAQAGVRYSLKNPHAYIDSNLVGFTNILEGCRHNQVAHLAYASSSSVYGGNTKMPFSEHDAVDHPVSLYAATKKANELMAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNHGNM 214 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107654.1635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107654.1635.1 >prot_M-pyrifera_M_contig107654.1635.1 ID=prot_M-pyrifera_M_contig107654.1635.1|Name=mRNA_M-pyrifera_M_contig107654.1635.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp GFIGFNVTSQLLAQGHQVTGIDNLNSHYSVQLKQDRLQVLQKSNLFEFAEback to top mRNA from alignment at M-pyrifera_M_contig107654:3..617+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107654.1635.1 ID=mRNA_M-pyrifera_M_contig107654.1635.1|Name=mRNA_M-pyrifera_M_contig107654.1635.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=615bp|location=Sequence derived from alignment at M-pyrifera_M_contig107654:3..617+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107654:3..617+ >mRNA_M-pyrifera_M_contig107654.1635.1 ID=mRNA_M-pyrifera_M_contig107654.1635.1|Name=mRNA_M-pyrifera_M_contig107654.1635.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig107654:3..617+ (Macrocystis pyrifera P11B4 male)back to top |