mRNA_M-pyrifera_M_contig107228.1554.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A3D5DJ33_9GAMM (TonB-dependent receptor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DJ33_9GAMM) HSP 1 Score: 263 bits (673), Expect = 3.130e-81 Identity = 133/206 (64.56%), Postives = 159/206 (77.18%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAFTGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDNVDVDRLSGSSGRVQGDKYSIDYQTSIAF 618
DFS+LTTSDI RIEVVRGPQSSLWGSDALAGVINIIT+Q EA AS E GSFG++Q SGS G G+++ R+G NHLST GTN++ TG+E D YRTTS N KADWQAH+ + F A ARV D+ N+TD+G TGIP+DSDG++D +AAAN +A+ F WTH +GG+W RTDN D D L G+SGRVQGDKYS+DYQT I F
Sbjct: 131 DFSSLTTSDIERIEVVRGPQSSLWGSDALAGVINIITRQVDRPLEANASIEAGSFGSKQVSGSIGLRGDNHAFRVGANHLSTAGTNIAITGAEDDGYRTTSFNAKADWQAHKAIHFAANARVTDIRNDTDTGGITGIPVDSDGQSDTLLIYAAANVKASFFKDNWTHRIGGSWFRTDNKDRDLLDGTSGRVQGDKYSVDYQTDIRF 336
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A523KFS0_9GAMM (TonB-dependent receptor (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KFS0_9GAMM) HSP 1 Score: 137 bits (345), Expect = 3.950e-34 Identity = 85/209 (40.67%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAF--TGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDNVDVDRLSG-SSGRVQGDKYSIDYQTSIAF 618
+F+ L T++IARIE++RGPQS+L+GSDALAGVINIITK+ SG + E GSFGT G +GE Y L ++LS++GTN++ +G E D Y +I+ A + L FD R + NE D+ F TG +D+D K++ + A +LF+ W H G A T T+N + SG + QG K+ DYQT++ F
Sbjct: 86 NFAHLLTTNIARIEIIRGPQSALYGSDALAGVINIITKKGSGPTTLSGYAEAGSFGTFHGGGGISGSGERYHYNLYGSYLSSSGTNIAPSGDEDDGYDNGTISFSAGVTPFDNLKFDFTGRHTEASNEFDAQDFVVTGFAVDADNKSETSQDYLRGQATFSLFNRAWEHIAGAAITSTENDNF--TSGVETSSTQGKKFRFDYQTNLYF 292
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A168TW88_9CYAN (Uncharacterized protein n=1 Tax=Phormidium willei BDU 130791 TaxID=399101 RepID=A0A168TW88_9CYAN) HSP 1 Score: 132 bits (333), Expect = 2.340e-32 Identity = 88/209 (42.11%), Postives = 119/209 (56.94%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAF--TGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDNVDVDRLSG---SSGRVQGDKYSIDYQTSI 612
DFS L T DI RIE++RG QS+L+GS+A+ GVI+I TK+A F ATA EGGSF T+ SAG + + LR+G + G +++ G+E D RT S NL++ ++ + L F R+ D E D F TG IDSD T+ A+ LF G W LGGA+T +DN DR SG SSG G K +DYQ+++
Sbjct: 138 DFSQLLTGDIERIEILRGAQSALYGSEAIGGVISITTKRAGRGFSATAEAEGGSFWTKTARASAGAGFDDFDLRVGAEVFESGGIDIAPRGNEEDFNRTLSANLRSSYRPTDSLEFRVTGRLVDREFERDGQDFVTTGQAIDSDDYTESRDINLRGEAQLDLFGGAWEQILGGAYTSSDN---DRFSGGAFSSGSAGG-KQKLDYQSNV 342
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A2D5U7S9_9GAMM (TonB-dependent receptor n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2D5U7S9_9GAMM) HSP 1 Score: 128 bits (321), Expect = 9.380e-31 Identity = 80/198 (40.40%), Postives = 113/198 (57.07%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGA-FTGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDN-VDVDRLSGSSGRVQGDKY 588
++ TL+ DI RIEV+RGPQSS+ GSDA+AGV+NI+T+ A F A E GSF T+++ S G + + +RLG++ + T+G N+S +G E D Y TS+NLKA + A E L+ AR +D NE DS F G D D ++ + A A DGRW H L A ++ DN D + G+ D+Y
Sbjct: 120 NWGTLSADDIERIEVIRGPQSSMRGSDAMAGVVNIVTRGAEQPFSAKLYTEAGSFSTQRYGFSVGATQDDFTVRLGVSDIQTDGDNISRSGDEKDGYENTSVNLKAGFAASESLTLSLSARQSDGMNEFDSDEDFDGFVEDQDRVSEFRNSTVGLQANYASADGRWQHKLLVAQSKHDNEAFADGVKGNETASTKDQY 317
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A523MQ50_9GAMM (TonB-dependent receptor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MQ50_9GAMM) HSP 1 Score: 127 bits (320), Expect = 1.300e-30 Identity = 78/207 (37.68%), Postives = 113/207 (54.59%), Query Frame = 1
Query: 4 FSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAF--TGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDNVDV-DRLSGSSGRVQGDKYSIDYQTSIA 615
F L + I RIE++RGPQS+LWGSDALAG++N+IT + + F A E GSFGT G + G Y + + ++ + T+G+N+S G E D R T++NL A Q E+ + AR D + D+ F TG+P+D+D +TD + + A+ + RWTH TDN + D LS G +K YQTS+A
Sbjct: 117 FDQLLVTGIDRIEIIRGPQSALWGSDALAGIVNLITTRGTEPFSANGFLEAGSFGTTHVGGHLTSTGAIYDINVSVSRVDTDGSNISRVGDEDDGNRNTTLNLNAGAQLSERTRLEFFARHTDSVRDYDAIDFVTTGLPVDADRQTDATQEYLRVSVATAVLENRWTHRFSVTRLETDNENFGDGLS--LGSTAAEKLGFYYQTSLA 321
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: UPI000E5CC91E (TonB-dependent receptor n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5CC91E) HSP 1 Score: 127 bits (318), Expect = 2.620e-30 Identity = 85/209 (40.67%), Postives = 120/209 (57.42%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAF--TGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDNVDVDRLSG---SSGRVQGDKYSIDYQTSI 612
DFS L T+DI RIE++RG QS+L+GS+A+ GVI+I TK A F A+ + EGGSF T+ GSA E + LR+GI T G ++S +G E D + S N ++ ++ + L F R+ D ETD F TG ID+D ++ A + LF G W LGGA+TR+D +DR G +SG V G K +DYQ+++
Sbjct: 138 DFSQLLTNDIERIEILRGAQSALYGSEAIGGVISITTKAARPGFAASLAAEGGSFATKNLRGSANAGFEDFDLRVGIEAFETAGFDLSPSGDENDFSQAISANFRSAYRPVDDLEFRVNGRLVDRELETDGQDFVTTGEAIDADTYNEIRDLSLRAEGQLDLFGGAWEQTLGGAFTRSD---LDRFDGGALTSGSV-GSKRKLDYQSNV 342
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A0R2U7Z6_9GAMM (TonB-dependent receptor n=4 Tax=SAR86 cluster TaxID=62672 RepID=A0A0R2U7Z6_9GAMM) HSP 1 Score: 124 bits (312), Expect = 1.590e-29 Identity = 76/179 (42.46%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDS-GAFTGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDN 534
++ TL SDI RIE++RG QSS+ GSDA+AGV+NIIT+ A F E GSF T+ S E + +RLGI+HL T G N+S TG E D Y T++NLK++W A +QL AR AD NE DS G F + D D ++ A + DGRW H + + DN
Sbjct: 118 NWGTLVASDIERIEIIRGSQSSMLGSDAMAGVVNIITQSAEQPFGIKTFAEAGSFDTQNNGVSVELKNEDFDMRLGISHLQTAGENISRTGPEKDGYENTNVNLKSNWSATDQLHLTFAARQADGINEYDSDGNFDSLIDDQDQVSEFRNVTMRLQAHHSSIDGRWQHQVSVGQSTNDN 296
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A2A5GE19_9GAMM (TonB-dependent receptor n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2A5GE19_9GAMM) HSP 1 Score: 124 bits (310), Expect = 1.800e-29 Identity = 79/190 (41.58%), Postives = 105/190 (55.26%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAFTGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTR--TDNVDVDRLSGSS 564
+++ L + I RIE+VRGPQSSLWGSDA+AGVINIITKQA F+ A E GS GT G +GE Y + L H+ST+G N+S GSE D YR +++NLKA Q E LS R + NE D P+D D +++ F A A +L + W + + +R +N D L SS
Sbjct: 123 NWAHLPAAGIERIEIVRGPQSSLWGSDAMAGVINIITKQADEPFQGGAYSEAGSNGTNHTGFHVGGSGEKYHINLTGAHISTDGENISREGSEEDGYRNSTLNLKAGLQLLENLSLTLTGRQVEGENEFDPTPIA-FPVDGDEESEFRQRFFRAQADLSLLEDHWKQRVAMSVSRHSNENFSSDVLMSSS 311
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A2N6CHT0_9GAMM (TonB-dependent receptor n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2N6CHT0_9GAMM) HSP 1 Score: 124 bits (312), Expect = 1.810e-29 Identity = 82/207 (39.61%), Postives = 114/207 (55.07%), Query Frame = 1
Query: 4 FSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQFSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAF--TGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDNVDVDRLSGSSGRVQGDKYSIDYQTSIAF 618
+ LTT D+ RIE+VRGPQS+LWGSDALAGV+NIIT++ A+ EGGSFGT SA AGE + +G +L + G+N+S G E D Y+ ++ A A E L F+ R D N+ D+ F TG+P D+D +D + F ++ A+ +LFD W + + +DN D SSG D + YQ I F
Sbjct: 156 WEQLTTFDVERIEIVRGPQSALWGSDALAGVVNIITRRNVSGPAASGFVEGGSFGTVYSGASAQTAGERWTASVGAAYLDSEGSNISHHGGEDDGYQNLTVTGSAGLDATEALQFEFGGRYVDAENDYDAVDFFETGLPTDADLVSDTDSLFLSSIAKLSLFDDFWRNQFKVTYADSDN-DNHADGESSGSTAADTLGLYYQGGIEF 361
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Match: A0A7X3TMW2_9GAMM (TonB-dependent receptor (Fragment) n=2 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7X3TMW2_9GAMM) HSP 1 Score: 121 bits (304), Expect = 3.010e-29 Identity = 79/210 (37.62%), Postives = 119/210 (56.67%), Query Frame = 1
Query: 1 DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGEGGSFGTRQ--FSGSAGNAGESYRLRLGINHLSTNGTNVSATGSEADSYRTTSINLKADWQAHEQLSFDAVARVADMHNETDSGAF-TGIPIDSDGKTDMFAAFAAANARAALFDGRWTHWLGGAWTRTDNVDVDRLSGS-SGRVQGDKYSIDYQTSIAF 618
DFS +++ RIE+VRGP S+LWGSDA+AG IN+I+ + T S E G F TR+ SGSAG G+ + + ++HLS++G N+S +G E D YR + ++ A + Q+S +AR + ++ D+ +F TGIP DSD T + A GRWTH + T T + + + SGS +G GDK ++ YQ++ F
Sbjct: 138 DFSHFLAANLRRIEIVRGPLSALWGSDAVAGAINLISAPENFGRSLTTSAEAGQFNTRRGALSGSAG--GDGWGVGFSLDHLSSDGQNISRSGDEDDGYRNNTGHVVARFDPSGQISLRLIARRSQSESQFDATSFLTGIPADSDSSTRRIHSVVGLQGLATTSGGRWTHRA--SLTHTGSENRNFASGSETGETSGDKLNLSYQSTFLF 343 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107228.1554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107228.1554.1 >prot_M-pyrifera_M_contig107228.1554.1 ID=prot_M-pyrifera_M_contig107228.1554.1|Name=mRNA_M-pyrifera_M_contig107228.1554.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp DFSTLTTSDIARIEVVRGPQSSLWGSDALAGVINIITKQASGRFEATASGback to top mRNA from alignment at M-pyrifera_M_contig107228:3..620- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107228.1554.1 ID=mRNA_M-pyrifera_M_contig107228.1554.1|Name=mRNA_M-pyrifera_M_contig107228.1554.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107228:3..620- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107228:3..620- >mRNA_M-pyrifera_M_contig107228.1554.1 ID=mRNA_M-pyrifera_M_contig107228.1554.1|Name=mRNA_M-pyrifera_M_contig107228.1554.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig107228:3..620- (Macrocystis pyrifera P11B4 male)back to top |