mRNA_M-pyrifera_M_contig107013.1496.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A3C1KR99_9GAMM (Protein HflC n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KR99_9GAMM) HSP 1 Score: 360 bits (924), Expect = 9.920e-124 Identity = 193/207 (93.24%), Postives = 195/207 (94.20%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
HVK+PFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEE ASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDA+LI NIYASAF TNPEFYSFTR
Sbjct: 50 HVKVPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEEARASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAQLIRGEGDAQATNIYASAFNTNPEFYSFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A2N5Y095_9GAMM (Protein HflC n=2 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y095_9GAMM) HSP 1 Score: 320 bits (821), Expect = 4.610e-108 Identity = 172/207 (83.09%), Postives = 182/207 (87.92%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
HVK+PFVN+VRKFE RL+TVDSTPERFFT EKKALIVDS+AKFRVADT KFYTATNGEE A ALLGQRINDGLRNQVAVR+IQEVVSGQRDQLME LT LT+VA EEYGVEVLD+RVK+IDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTV+ ANAYRDAELI IYA AF + EFYSFTR
Sbjct: 50 HVKIPFVNSVRKFEGRLLTVDSTPERFFTLEKKALIVDSFAKFRVADTLKFYTATNGEEERAMALLGQRINDGLRNQVAVRSIQEVVSGQRDQLMEELTEALTDVAFEEYGVEVLDIRVKKIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVITANAYRDAELIRGEGDALATAIYAEAFNADQEFYSFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A2D5F9W5_9GAMM (Protein HflC n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5F9W5_9GAMM) HSP 1 Score: 317 bits (813), Expect = 7.590e-107 Identity = 169/207 (81.64%), Postives = 181/207 (87.44%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
HVK+PFVNNVRKFE RL+TVDSTPERFFT EKKAL+VDSYAKFRVADTA+FYTATNGEE A LL QRINDGLRNQVAVRTIQEVVSGQRDQLME LT EL++VA +EYGVEV+DVRVKQIDLP DVSESVYRRMNAEREKEAREHR+ GQELAEGIRAAADREVTVLEANAYRDA+ I IYA AF +PEFY+FTR
Sbjct: 50 HVKVPFVNNVRKFEGRLLTVDSTPERFFTMEKKALVVDSYAKFRVADTARFYTATNGEESRAMGLLAQRINDGLRNQVAVRTIQEVVSGQRDQLMEDLTEELSQVALDEYGVEVVDVRVKQIDLPQDVSESVYRRMNAEREKEAREHRSQGQELAEGIRAAADREVTVLEANAYRDAQEIRGEGDAEATRIYAEAFGADPEFYAFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A5C8ZN39_9GAMM (Protein HflC n=3 Tax=Parahaliea TaxID=1857932 RepID=A0A5C8ZN39_9GAMM) HSP 1 Score: 314 bits (804), Expect = 1.770e-105 Identity = 167/207 (80.68%), Postives = 181/207 (87.44%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
H K+PFVNNVRKF+ R++TVDS PERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEE A +LL QRINDGLRNQVAVRTIQEVVSG+RDQLM+ +T +L EVA E GVE++DVRVKQIDLPPDVSESVYRRMNAEREKEAREHR+LGQELAEGIRAAADREVTVLEANAYRDAELI IYA AF +PEFY+FTR
Sbjct: 50 HWKIPFVNNVRKFDGRVLTVDSQPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEEARAMSLLSQRINDGLRNQVAVRTIQEVVSGERDQLMDNITDKLNEVALTELGVEIVDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRSLGQELAEGIRAAADREVTVLEANAYRDAELIRGEGDALATAIYAEAFNEDPEFYAFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: UPI001672EC65 (protease modulator HflC n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI001672EC65) HSP 1 Score: 313 bits (802), Expect = 3.570e-105 Identity = 166/207 (80.19%), Postives = 180/207 (86.96%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
H K+PFVNNVRKF+ R++TVDS PERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEE A LL QRINDGLRNQVAVRTIQEVVSG+RDQLMEA+TA+L VAR+E GVEV+DVRVKQIDLPPDVSESVYRRMNAEREKEAREHRA G+ELAEGI+AAADREVTV+ ANAYRDAE I IYA +F +PEFYSFTR
Sbjct: 50 HFKVPFVNNVRKFDGRVLTVDSQPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEESRAMGLLSQRINDGLRNQVAVRTIQEVVSGERDQLMEAITAQLDVVARDELGVEVVDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRAQGRELAEGIQAAADREVTVISANAYRDAEQIRGDGDAEATRIYADSFNQDPEFYSFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A6C0U2N5_9GAMM (Protein HflC n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U2N5_9GAMM) HSP 1 Score: 311 bits (798), Expect = 1.450e-104 Identity = 166/207 (80.19%), Postives = 181/207 (87.44%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
H+K+PFVNNVRKFE RL+TVD T ERFFTQE+KALIVDSYAKFRVA+T KFYTATNGEE A ALLGQRINDGLRN+VAVRTIQEVVSGQRD+LM +LT L+E+A EYGVEV+DVRVKQIDLPPDVSESVY+RMNAEREKEAREHR+LGQELAEGIRAAADREVTV+EANAYRDAELI IYA AF + EFYSFTR
Sbjct: 50 HIKIPFVNNVRKFEGRLLTVDFTAERFFTQEQKALIVDSYAKFRVANTEKFYTATNGEEARAIALLGQRINDGLRNEVAVRTIQEVVSGQRDELMSSLTESLSELALNEYGVEVVDVRVKQIDLPPDVSESVYQRMNAEREKEAREHRSLGQELAEGIRAAADREVTVIEANAYRDAELIRGEGDAQATAIYAGAFNRDREFYSFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A661HB67_9GAMM (Protein HflC n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A661HB67_9GAMM) HSP 1 Score: 308 bits (788), Expect = 4.790e-103 Identity = 162/207 (78.26%), Postives = 181/207 (87.44%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
HVK PFVN+VRKF+ R++TVDS PERFFTQEKKALIVDSYAKF+VADTAKFYTATNGEE A LL QRIN+GLRNQVAVRT+QEVVSG+R+QLME LTAELT VA+EE GVEV+DVRVKQIDLPPDVSESVY+RMNAEREKEAREHR+ G+ELAEGIRAAADREVTV++ANAYRD+ELI +YA AF + EFYSFTR
Sbjct: 50 HVKYPFVNSVRKFDGRILTVDSQPERFFTQEKKALIVDSYAKFKVADTAKFYTATNGEESRAMGLLAQRINNGLRNQVAVRTVQEVVSGEREQLMEDLTAELTIVAQEELGVEVVDVRVKQIDLPPDVSESVYQRMNAEREKEAREHRSQGEELAEGIRAAADREVTVIQANAYRDSELIRGEGDATATRVYADAFNQDSEFYSFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: UPI0019D3E7E5 (protease modulator HflC n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3E7E5) HSP 1 Score: 304 bits (779), Expect = 1.120e-101 Identity = 161/207 (77.78%), Postives = 178/207 (85.99%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
H K+PFVNNVRKF+ R++TVDS PERFFTQEKKALIVDSYAKF+VADT+KFYTATNG+E A LL QRINDGLRNQVAVRTIQEVVSG+RDQLME + +L +VA E GVEV+DVRVKQIDLPPDVS+SVYRRMNAEREKEAREHR+ GQELAEGIRAAADREVTV+EANAYRDA+ I IYASAF +PEFYSFTR
Sbjct: 50 HFKIPFVNNVRKFDGRVLTVDSQPERFFTQEKKALIVDSYAKFKVADTSKFYTATNGDESRAMGLLSQRINDGLRNQVAVRTIQEVVSGERDQLMEDIATQLNKVALTELGVEVVDVRVKQIDLPPDVSDSVYRRMNAEREKEAREHRSQGQELAEGIRAAADREVTVIEANAYRDAQQIRGEGDARATAIYASAFGQDPEFYSFTR 256
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A2D4T6M6_9GAMM (Protein HflC n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2D4T6M6_9GAMM) HSP 1 Score: 304 bits (778), Expect = 1.530e-101 Identity = 165/207 (79.71%), Postives = 183/207 (88.41%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
H+K+PFVNNVRKF+ R++TVDS+PERFFTQEKKALIVDSYAKFRV DTAK+YTATNGEE A+ LL QRINDGLRNQVAVRT+QEVVSGQRDQLM A+TA+L EVA EE GVEV+DVRVK+IDLPPDVSESVYRRMNAEREKEARE R+ G+ELAEGIRAAADREVTV+EANA+RD XXXXX IYA AF +PEFYSFTR
Sbjct: 49 HLKIPFVNNVRKFDGRILTVDSSPERFFTQEKKALIVDSYAKFRVTDTAKYYTATNGEENRAAGLLAQRINDGLRNQVAVRTVQEVVSGQRDQLMLAITAQLNEVANEELGVEVIDVRVKKIDLPPDVSESVYRRMNAEREKEARELRSEGKELAEGIRAAADREVTVIEANAFRDXXXXXXXXXAEATRIYAEAFNQDPEFYSFTR 255
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Match: A0A7W2YIK7_9GAMM (Protein HflC n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2YIK7_9GAMM) HSP 1 Score: 299 bits (766), Expect = 1.050e-99 Identity = 159/207 (76.81%), Postives = 177/207 (85.51%), Query Frame = 1
Query: 1 HVKMPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTATNGEERLASALLGQRINDGLRNQVAVRTIQEVVSGQRDQLMEALTAELTEVAREEYGVEVLDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRALGQELAEGIRAAADREVTVLEANAYRDAELIXXXXXXXXXNIYASAFKTNPEFYSFTR 621
H K+PFVNNVRKF+ R++TVD+ ERFFTQEKKALIVDSYAKF+VADT K+YTATNGEE A LL QRIN+GLRNQVAVRTIQEVVSG+RD LME+L +L +VA +E GVEV+DVRVKQIDLPPDVSESVYRRMNAEREKEAREHRA GQELAEGI+AAADREVTV+ ANAYRDAELI IYA AF ++PEFYSFTR
Sbjct: 50 HWKIPFVNNVRKFDGRVLTVDAQAERFFTQEKKALIVDSYAKFKVADTLKYYTATNGEEMRAMTLLSQRINNGLRNQVAVRTIQEVVSGERDMLMESLAVDLNKVALKELGVEVVDVRVKQIDLPPDVSESVYRRMNAEREKEAREHRAQGQELAEGIQAAADREVTVIAANAYRDAELIRGEGDAIATAIYAEAFNSDPEFYSFTR 256 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107013.1496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107013.1496.1 >prot_M-pyrifera_M_contig107013.1496.1 ID=prot_M-pyrifera_M_contig107013.1496.1|Name=mRNA_M-pyrifera_M_contig107013.1496.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp MPFVNNVRKFEARLMTVDSTPERFFTQEKKALIVDSYAKFRVADTAKFYTback to top mRNA from alignment at M-pyrifera_M_contig107013:2..622+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107013.1496.1 ID=mRNA_M-pyrifera_M_contig107013.1496.1|Name=mRNA_M-pyrifera_M_contig107013.1496.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig107013:2..622+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107013:2..622+ >mRNA_M-pyrifera_M_contig107013.1496.1 ID=mRNA_M-pyrifera_M_contig107013.1496.1|Name=mRNA_M-pyrifera_M_contig107013.1496.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig107013:2..622+ (Macrocystis pyrifera P11B4 male)back to top |