mRNA_M-pyrifera_M_contig106893.1473.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A2E3MHY3_9GAMM (Trk system potassium uptake protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MHY3_9GAMM) HSP 1 Score: 303 bits (777), Expect = 9.120e-99 Identity = 141/203 (69.46%), Postives = 174/203 (85.71%), Query Frame = 1 Query: 1 AWLAFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAYNNNPM 609 AWLAF+ F +TL TGF W P + ELK+RDGF+IV+LFW VLS+F ALP+MIS P++ TDA+FE+ SGLT TGA+VL+ I+ LPHA+LFYRQ+L FLGGMG+VVLAVAILPMLGIGG+QLYRAE+PGPAKDTKLTPRI ++AKALW IYVGLTV+CAL+YW AGM LF+AVGESFST++TGGF++H++SFA+ NP+ Sbjct: 35 AWLAFMVGFGITLVTGFIFWLPTCRVKAELKVRDGFIIVVLFWTVLSLFGALPMMISHFPNISFTDAVFESFSGLTTTGASVLSGIEYLPHAILFYRQELQFLGGMGIVVLAVAILPMLGIGGMQLYRAEMPGPAKDTKLTPRITQSAKALWYIYVGLTVICALAYWAAGMDLFDAVGESFSTISTGGFTIHDNSFAFYKNPI 237
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A2E2TH91_9GAMM (Trk system potassium uptake protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TH91_9GAMM) HSP 1 Score: 303 bits (775), Expect = 1.830e-98 Identity = 142/207 (68.60%), Postives = 169/207 (81.64%), Query Frame = 1 Query: 1 AWLAFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAYNNNPMFINV 621 AW+AF AF VT TGF WF R+A +LK RDGF IV+LFW VLS+F ALPLMI++ PHL T+A+FE+VSGLT TGATVL+ ID LPHA+L+YRQQL FLGGMG++VLAVAILPMLGIGG+QLYRAEIPGP KD KLTPR+ TAKALW IYVGLT+LCA +YW GM LF+A+GESF T++TGGFSMH+ SF Y N+P+ + Sbjct: 35 AWMAFFIAFLVTFTTGFLCWFHCRKADTDLKARDGFFIVVLFWSVLSLFGALPLMIAQQPHLSFTNAVFESVSGLTTTGATVLSGIDKLPHAILYYRQQLQFLGGMGIIVLAVAILPMLGIGGMQLYRAEIPGPIKDNKLTPRLTHTAKALWYIYVGLTILCAFAYWAGGMHLFDAIGESFGTISTGGFSMHDSSFKYYNSPIIYGI 241
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A0W0R2N8_9GAMM (Trk system potassium uptake protein n=1 Tax=Legionella adelaidensis TaxID=45056 RepID=A0A0W0R2N8_9GAMM) HSP 1 Score: 283 bits (724), Expect = 9.050e-91 Identity = 135/198 (68.18%), Postives = 165/198 (83.33%), Query Frame = 1 Query: 4 WLAFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMIS-KHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAY 594 WL F++AF TL TG LWF R + ELKIRDGF+IV+LFWFVL FA+LP + + +H + LTDA FE+VSG T TGAT++ NI+ LPHA+LFYRQQL FLGGMG+VVLAVAILPMLG+GG+QLYRAE PGP K+TKLTPRIA+TAKALW IY LT+LC LSYW++GM F+A+GESF+TV+TGGFSMH++SFA+ Sbjct: 36 WLPFISAFLCTLGTGLVLWFLCRHSHNELKIRDGFLIVVLFWFVLCFFASLPFVFAIQHHNHNLTDAFFESVSGFTTTGATIIQNIESLPHAILFYRQQLQFLGGMGIVVLAVAILPMLGVGGMQLYRAETPGPMKETKLTPRIAQTAKALWFIYFSLTLLCMLSYWLSGMTWFDALGESFATVSTGGFSMHDESFAF 233
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A369CG31_9GAMM (Trk system potassium uptake protein n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369CG31_9GAMM) HSP 1 Score: 280 bits (715), Expect = 1.990e-89 Identity = 133/200 (66.50%), Postives = 164/200 (82.00%), Query Frame = 1 Query: 10 AFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAYNNNPM 609 AF+ F +TLATG LW P + EL+IRDGF+IV+LFW VL F ALPLM+ + PH+ LTDA+FE++SGLT TGATV+ +D LP ++L+YRQQL +LGGMG++VLAVAILPMLGIGG+QLYRAE+PGP KD+KLTPRIAETAKALW IY+GLTVLCAL+YW AGM LF+A+G SFSTVA GGFS H+ S + N+ + Sbjct: 38 AFLQGFALTLATGLVLWLPVSRHRGELRIRDGFLIVVLFWSVLGSFGALPLMLGQDPHMSLTDAVFESISGLTTTGATVIVGLDQLPQSILYYRQQLQWLGGMGIIVLAVAILPMLGIGGMQLYRAEMPGPVKDSKLTPRIAETAKALWYIYLGLTVLCALAYWAAGMSLFDAIGHSFSTVAIGGFSTHDASMGHFNSAL 237
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A0W0VBW6_9GAMM (Trk system potassium uptake protein n=2 Tax=Legionella jordanis TaxID=456 RepID=A0A0W0VBW6_9GAMM) HSP 1 Score: 279 bits (713), Expect = 3.870e-89 Identity = 134/197 (68.02%), Postives = 163/197 (82.74%), Query Frame = 1 Query: 4 WLAFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAY 594 WL FVAAF T TG LWF R+ ELKIRDGF+IV+LFWFVL +A+LP + + H H LTDA+FE+VSG T TGA+++ +I+ LPHA+LFYRQQL FLGGMG+VVLAVAILPMLG+GG+QLYRAE PGP KD+KLTPRIA+TAKALWSIY+ LT +C L YW+AGM F+A+GESF+TV+TGGFSMH+ SFA+ Sbjct: 36 WLPFVAAFACTFFTGLVLWFSFRKQHHELKIRDGFLIVVLFWFVLCFYASLPFIFAIHHH-SLTDAVFESVSGFTTTGASIIQHIEGLPHAVLFYRQQLQFLGGMGIVVLAVAILPMLGVGGMQLYRAETPGPMKDSKLTPRIAQTAKALWSIYLLLTCICWLCYWLAGMDWFDALGESFATVSTGGFSMHDSSFAF 231
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A378IRL1_9GAMM (Trk system potassium uptake protein n=7 Tax=Legionella TaxID=445 RepID=A0A378IRL1_9GAMM) HSP 1 Score: 279 bits (713), Expect = 4.090e-89 Identity = 136/201 (67.66%), Postives = 164/201 (81.59%), Query Frame = 1 Query: 4 WLAFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMIS-KHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAYNNN 603 WL FVAAF T TG LW R ELKIRDGF++V+LFWFVL FA+LP + + +H + GLTDA+FE+VSG T TGA+++ ++D LPHA+LFYRQQL FLGGMG+VVLAVAILPMLG+GG+QL+RAE PGP KD+KLTPRIA+TAKALW IYV LT LC LSYW AGM F+A+GESF+TV+TGGFSMH++SFAY N Sbjct: 36 WLPFVAAFTCTFVTGSTLWLCFRTQHHELKIRDGFLLVVLFWFVLCFFASLPFIFALRHENHGLTDALFESVSGFTTTGASIIRHLDGLPHAILFYRQQLQFLGGMGIVVLAVAILPMLGVGGMQLFRAETPGPMKDSKLTPRIAQTAKALWFIYVLLTFLCMLSYWAAGMDWFDALGESFTTVSTGGFSMHDNSFAYYQN 236
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A383XRH6_9GAMM (Trk system potassium uptake protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A383XRH6_9GAMM) HSP 1 Score: 278 bits (712), Expect = 5.950e-89 Identity = 129/204 (63.24%), Postives = 165/204 (80.88%), Query Frame = 1 Query: 10 AFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAYNNNPMFINV 621 AFVAAF +TL TG +W+P R +ELKIRDG ++V+LFW VLS+F A+PL + + P L +TDA+FE+VSGLT TGAT+L ID LPH++L+YRQQLHFLGGMG++VLAVAILP+LG+GG+QLYRAE PGP KD KLTPRI ETAK LW IY+GLTV+CA+++W+AGM F+A+ S STVATGGFS H+ S Y N+ + ++ Sbjct: 40 AFVAAFFITLITGAAVWYPARDRRRELKIRDGMLVVVLFWVVLSLFGAIPLYLFERPFLSVTDAVFESVSGLTTTGATILVGIDSLPHSVLWYRQQLHFLGGMGIIVLAVAILPLLGVGGMQLYRAETPGPMKDAKLTPRITETAKTLWLIYLGLTVVCAVAFWLAGMTWFDAISHSMSTVATGGFSTHDQSIGYYNSALIESI 243
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A3P3VJN1_9GAMM (Trk system potassium uptake protein n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A3P3VJN1_9GAMM) HSP 1 Score: 278 bits (711), Expect = 7.740e-89 Identity = 131/200 (65.50%), Postives = 160/200 (80.00%), Query Frame = 1 Query: 10 AFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAYNNNPM 609 AF AF +TL TGF +W P + QEL+ RDGF++ +LFW VLS F ALP M+ +HP + + DA+FE++SGLT TGAT+L NID LP ++LFYRQQL +LGGMG++VLAVA+LPMLGIGG+QLYRAE PGP KD KLTPRI ETAKALW IY+ LTV CAL+YW AGM LF+AVG SFST+A GGFS H+DS Y N+P+ Sbjct: 38 AFGYAFVITLVTGFLIWAPVFRVRQELRTRDGFLVTVLFWAVLSGFGALPFMLHEHPAINVVDAVFESMSGLTTTGATILTNIDELPKSILFYRQQLQWLGGMGIIVLAVAVLPMLGIGGMQLYRAETPGPVKDAKLTPRITETAKALWYIYLSLTVTCALAYWAAGMDLFDAVGHSFSTIAIGGFSTHDDSIGYFNSPL 237
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A8J7FG08_9GAMM (Trk system potassium uptake protein n=1 Tax=Pontibacterium sp. N1Y112 TaxID=2781979 RepID=A0A8J7FG08_9GAMM) HSP 1 Score: 278 bits (710), Expect = 1.090e-88 Identity = 130/196 (66.33%), Postives = 157/196 (80.10%), Query Frame = 1 Query: 7 LAFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAY 594 +AF A F +TL TGF LW P + Q+L+ RDGF++ +LFW VL +F ALPLM++ +PHL DA+FE++SGLT TGATV+ ID LP ++L+YRQQL +LGGMG++VLAVAILPMLGIGG+QLYRAE PGP KD+KLTPRI ETAKALW IY+ LTVLCAL YW AGM LF+AVG SFSTVA GGFS H+ S Y Sbjct: 37 MAFAAGFAITLVTGFMLWIPVHRVRQDLRTRDGFLVTVLFWAVLGLFGALPLMLADNPHLSFVDALFESLSGLTTTGATVMTGIDQLPESILWYRQQLQWLGGMGIIVLAVAILPMLGIGGMQLYRAETPGPVKDSKLTPRITETAKALWYIYLSLTVLCALGYWAAGMTLFDAVGHSFSTVAIGGFSTHDASIGY 232
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Match: A0A1H6DGE2_9GAMM (Trk system potassium uptake protein n=3 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A1H6DGE2_9GAMM) HSP 1 Score: 278 bits (710), Expect = 1.090e-88 Identity = 130/200 (65.00%), Postives = 160/200 (80.00%), Query Frame = 1 Query: 10 AFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAALPLMISKHPHLGLTDAIFEAVSGLTATGATVLNNIDLLPHAMLFYRQQLHFLGGMGVVVLAVAILPMLGIGGLQLYRAEIPGPAKDTKLTPRIAETAKALWSIYVGLTVLCALSYWVAGMPLFNAVGESFSTVATGGFSMHEDSFAYNNNPM 609 AF AF +TL TGF +W P Q Q+L+ RDGF+I +LFW VL+ +LPL +S+ PHL TDAIFE++SGLT TGATV+ +D+LP ++L+YRQQL +LGGMG++VLAVAILPMLGIGG+QLYRAE PGP KD+KLTPRI ETAKALW IY+ LT+ CAL YW AGM LF+A+G SFSTVA GGFS H+ S AY N+P+ Sbjct: 38 AFAIAFFITLLTGFLIWIPVHQVRQDLRTRDGFLITVLFWSVLAAAGSLPLQLSESPHLSFTDAIFESLSGLTTTGATVMTGLDMLPESLLYYRQQLQWLGGMGIIVLAVAILPMLGIGGMQLYRAETPGPVKDSKLTPRITETAKALWYIYLSLTIACALGYWAAGMSLFDAIGHSFSTVAIGGFSTHDASIAYFNSPV 237 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106893.1473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106893.1473.1 >prot_M-pyrifera_M_contig106893.1473.1 ID=prot_M-pyrifera_M_contig106893.1473.1|Name=mRNA_M-pyrifera_M_contig106893.1473.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp AWLAFVAAFCVTLATGFCLWFPNRQAIQELKIRDGFVIVILFWFVLSMFAback to top mRNA from alignment at M-pyrifera_M_contig106893:2..622- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106893.1473.1 ID=mRNA_M-pyrifera_M_contig106893.1473.1|Name=mRNA_M-pyrifera_M_contig106893.1473.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig106893:2..622- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106893:2..622- >mRNA_M-pyrifera_M_contig106893.1473.1 ID=mRNA_M-pyrifera_M_contig106893.1473.1|Name=mRNA_M-pyrifera_M_contig106893.1473.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig106893:2..622- (Macrocystis pyrifera P11B4 male)back to top |