mRNA_M-pyrifera_M_contig106892.1472.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A7Y2DPX8_9ACTN (Sigma 54-interacting transcriptional regulator n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DPX8_9ACTN) HSP 1 Score: 311 bits (797), Expect = 6.340e-102 Identity = 156/207 (75.36%), Postives = 176/207 (85.02%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANIPDDGPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYG+VPRTNRG+FAINELPDLAERIQVGLLNVLEERDVQ+RGYKVRLP+DVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYP E+ TE + QEA IPD G + +PDFM+ +I FTH AR SG +NQ SGVSVR++VSN+ETLAAAA R+LR+GE +PRV DLDA+ S+AGKIEIE+LDEG Sbjct: 159 EGRYLSDELTLHYGMVPRTNRGIFAINELPDLAERIQVGLLNVLEERDVQIRGYKVRLPLDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPYELDTEAAVVTQEAFIPDAGLTVRIPDFMSNVIVRFTHLARSSGQVNQRSGVSVRMSVSNMETLAAAATARALRLGE-----DVAIPRVCDLDAIFPSSAGKIEIESLDEG 360
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A5Q2RGL3_9ACTN (Magnesium chelatase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RGL3_9ACTN) HSP 1 Score: 310 bits (795), Expect = 1.100e-101 Identity = 159/208 (76.44%), Postives = 179/208 (86.06%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEAN-IPDDGPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYGLVPRTNRG+FAINELPDLAERIQVGLLNVLEERDVQ+RGYK+RLP+DVML ASANPEDYTNRGR+ITPLKDRFGAQIRTHYPLE+ATEVEIA QEA + G + +P++M E++AT +H AR S HINQ SGVSVRLTV+NLETL A A RR+LR GE VVPRVSDLDAL SST+GK+EIE L++G Sbjct: 155 EGRYLSDELTLHYGLVPRTNRGIFAINELPDLAERIQVGLLNVLEERDVQIRGYKIRLPLDVMLFASANPEDYTNRGRLITPLKDRFGAQIRTHYPLEVATEVEIAAQEARPLEAPGVEVHVPEYMAEIVATLSHLARQSPHINQRSGVSVRLTVANLETLVANAARRALRQGET-----EVVPRVSDLDALASSTSGKVEIETLEDG 357
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A7Y2IGM1_9ACTN (Sigma 54-interacting transcriptional regulator n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IGM1_9ACTN) HSP 1 Score: 309 bits (792), Expect = 4.180e-101 Identity = 158/207 (76.33%), Postives = 177/207 (85.51%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANIPDDGPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLP+DVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYP ++ E +A QEA IP++G + +P+FMT +I FTH AR SG +NQ SGVSVR++ +NLETLAAAA RSLR+GE VVPR+ DLDA+ S+AGKIEIE+LDEG Sbjct: 165 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPLDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPYDMDIEANVAHQEAFIPNNGLPVRIPEFMTSIIVRFTHLARRSGQVNQRSGVSVRMSTTNLETLAAAATARSLRLGET-----IVVPRICDLDAIFPSSAGKIEIESLDEG 366
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A7V9SR93_9ACTN (Sigma 54-interacting transcriptional regulator n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9SR93_9ACTN) HSP 1 Score: 306 bits (784), Expect = 4.600e-100 Identity = 148/207 (71.50%), Postives = 180/207 (86.96%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANIPDDGPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELT+HYGL+PRTNRG+FAINELPDLAERIQVGLLNVLEERDVQVRGYK+RLP+DVMLVA+ANP+DYTNRGR+ITPLKDRFGAQ+RTHYPL++ATE+ + QEA++P+ G + +PDFM +++AT TH AR S INQ SGVSVRLTV+N ET+ A A+RR++ +GE VPR+SDLDAL SST+GKIEIE++D+G Sbjct: 155 EGRYLSDELTIHYGLIPRTNRGIFAINELPDLAERIQVGLLNVLEERDVQVRGYKIRLPLDVMLVATANPDDYTNRGRIITPLKDRFGAQVRTHYPLDVATEITVVKQEADVPEVGVKVEMPDFMHDIVATLTHLARASSQINQRSGVSVRLTVANAETIVANALRRAILLGEP-----VAVPRISDLDALASSTSGKIEIESMDDG 356
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A2E3WSF7_9ACTN (Magnesium chelatase n=3 Tax=Acidimicrobiales TaxID=84993 RepID=A0A2E3WSF7_9ACTN) HSP 1 Score: 305 bits (781), Expect = 1.560e-99 Identity = 156/208 (75.00%), Postives = 180/208 (86.54%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANI-PDDGPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYGLVPRTNRG+FAINELPDL+ERIQVGLLNVLEERDVQVRGYK+RLP+D++LVASANPEDYTNRGR+ITPLKDRFG+Q+RTHYP EI E IA+QEA I D A+ +PDFM+++IAT THAAR S HINQ SGVSVR+TV+N E+L A AVRR+L E GTVVPRVSDL AL++STAGKIE+E+LD+G Sbjct: 155 EGRYLSDELTLHYGLVPRTNRGIFAINELPDLSERIQVGLLNVLEERDVQVRGYKIRLPLDILLVASANPEDYTNRGRIITPLKDRFGSQLRTHYPFEIDLEANIAVQEAAIFSKDDVAVVVPDFMSKIIATVTHAARESAHINQRSGVSVRVTVANYESLVAGAVRRTLLTNE-----GTVVPRVSDLSALLASTAGKIEVESLDDG 357
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A6J4ISD0_9ACTN (Magnesium chelatase, subunit ChlI n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4ISD0_9ACTN) HSP 1 Score: 304 bits (779), Expect = 2.770e-99 Identity = 154/208 (74.04%), Postives = 178/208 (85.58%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANIPDD-GPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYGLVPRTNRG+FAINELPDL+ERIQVGLLNVLEERDVQVRGYK+RLP+DVM+VASANPEDYTNRGR+ITPLKDRFGAQIRTHYPL++ TE+E+ QEA D G I +PDFM E++AT +H AR S HINQ SGVSVRL+++N ETL A A RR+LR+GE VPRVSDL+AL+SSTAGK+EIE ++EG Sbjct: 156 EGRYLSDELTLHYGLVPRTNRGIFAINELPDLSERIQVGLLNVLEERDVQVRGYKIRLPLDVMMVASANPEDYTNRGRIITPLKDRFGAQIRTHYPLDVRTELEVVRQEAQTLDGLGVQIHMPDFMAEVVATLSHLARSSPHINQRSGVSVRLSIANYETLIANAARRALRLGEKD-----AVPRVSDLEALVSSTAGKVEIETVEEG 358
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A7W0REL8_9ACTN (Sigma 54-interacting transcriptional regulator n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0REL8_9ACTN) HSP 1 Score: 304 bits (778), Expect = 4.160e-99 Identity = 155/208 (74.52%), Postives = 178/208 (85.58%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANIPD-DGPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYGLVPRTNRG+FAINELPDLAERIQVGLLNVLEERD+QVRGYKVRLP+DVMLVASANPEDYTNRGR+ITPLKDRFG+QIRTHYPL++ TE+ IA QEA D G + LPD+++E++AT + AR S H+NQ SGVSVRLTV+N ETL A A RRSLR+GE +VPRVSDLDAL++ST GKIE+E L+EG Sbjct: 156 EGRYLSDELTLHYGLVPRTNRGIFAINELPDLAERIQVGLLNVLEERDIQVRGYKVRLPLDVMLVASANPEDYTNRGRIITPLKDRFGSQIRTHYPLDVETEIAIAAQEARPLDAQGVRVQLPDYLSEVVATISQLARSSPHVNQRSGVSVRLTVANTETLLANATRRSLRLGE-----DEIVPRVSDLDALVASTQGKIEVETLEEG 358
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A3D0TL44_9ACTN (Magnesium chelatase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D0TL44_9ACTN) HSP 1 Score: 303 bits (776), Expect = 1.050e-98 Identity = 154/209 (73.68%), Postives = 180/209 (86.12%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANIPDDGPAI--FLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYGLVPRTNRG+FA+NELPDLAERIQVGLLNVLEERDVQ+RGYKVRLP+DV+LVASANPEDYTNRGR+ITPLKDRFG+QIRTHYPL++ TE+EIA EA P D P + +P+FM+E++A F+H AR S H+NQ SGVSVR+TV+NLETL A A RR+L+ GE V PRVSDL AL+SSTAGK+EIE+L+EG Sbjct: 155 EGRYLSDELTLHYGLVPRTNRGIFAVNELPDLAERIQVGLLNVLEERDVQIRGYKVRLPLDVLLVASANPEDYTNRGRIITPLKDRFGSQIRTHYPLDVDTEMEIAAAEAT-PLDAPGVDVSVPEFMSEIVANFSHVARASAHVNQRSGVSVRMTVTNLETLVANATRRALQRGETA-----VAPRVSDLGALMSSTAGKLEIESLEEG 357
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A538JAX3_9ACTN (Magnesium chelatase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JAX3_9ACTN) HSP 1 Score: 302 bits (774), Expect = 1.580e-98 Identity = 153/208 (73.56%), Postives = 179/208 (86.06%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEANIPDDGPA-IFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYGLVPRTNRG+FAINELPDLAERIQVGLLNVLEERDVQVRGYK+RLP+DVMLVASANPEDYTNRGR+ITPLKDRFGAQIRTHYPL++ TE+ + QEA+ D + +PDFM+E++AT TH AR S H+NQ SGVSVRL+++N ETL A A RR+LR+GE VVPRVSDL+AL +STAGK+EIE+L++G Sbjct: 155 EGRYLSDELTLHYGLVPRTNRGIFAINELPDLAERIQVGLLNVLEERDVQVRGYKIRLPLDVMLVASANPEDYTNRGRIITPLKDRFGAQIRTHYPLDVETELAVVRQEAHALDQSALRVQVPDFMSEVVATLTHLARSSPHVNQRSGVSVRLSIANYETLVANATRRALRLGEPD-----VVPRVSDLEALAASTAGKVEIESLEDG 357
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Match: A0A7C7XP98_9ACTN (Magnesium chelatase n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7XP98_9ACTN) HSP 1 Score: 301 bits (772), Expect = 3.160e-98 Identity = 155/208 (74.52%), Postives = 182/208 (87.50%), Query Frame = 1 Query: 1 EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQVRGYKVRLPIDVMLVASANPEDYTNRGRMITPLKDRFGAQIRTHYPLEIATEVEIALQEA-NIPDDGPAIFLPDFMTELIATFTHAARGSGHINQASGVSVRLTVSNLETLAAAAVRRSLRMGEVGLDTGTVVPRVSDLDALISSTAGKIEIEALDEG 621 EGRYLSDELTLHYG+VPRTNRG+FAINELPDLAERIQVGLLNVLEERDVQ+RGYKV+LP+DV+LVASANPEDYTNRGR+ITPLKDRFGAQIRTHYPLEI TE+EIA QEA + DG +I +P+FMTE+IATF+H R S +NQ SGVSVR+TV+N ETL A A RR+L+ GE VVPRVSDL+AL++S++GKIEIE+++EG Sbjct: 155 EGRYLSDELTLHYGMVPRTNRGIFAINELPDLAERIQVGLLNVLEERDVQIRGYKVQLPLDVLLVASANPEDYTNRGRLITPLKDRFGAQIRTHYPLEIDTEMEIAEQEAVPLKADGLSITVPEFMTEVIATFSHICRSSPQVNQRSGVSVRMTVTNYETLVANATRRALQAGE-----SYVVPRVSDLEALMASSSGKIEIESIEEG 357 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106892.1472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106892.1472.1 >prot_M-pyrifera_M_contig106892.1472.1 ID=prot_M-pyrifera_M_contig106892.1472.1|Name=mRNA_M-pyrifera_M_contig106892.1472.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp EGRYLSDELTLHYGLVPRTNRGVFAINELPDLAERIQVGLLNVLEERDVQback to top mRNA from alignment at M-pyrifera_M_contig106892:2..622+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106892.1472.1 ID=mRNA_M-pyrifera_M_contig106892.1472.1|Name=mRNA_M-pyrifera_M_contig106892.1472.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig106892:2..622+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106892:2..622+ >mRNA_M-pyrifera_M_contig106892.1472.1 ID=mRNA_M-pyrifera_M_contig106892.1472.1|Name=mRNA_M-pyrifera_M_contig106892.1472.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig106892:2..622+ (Macrocystis pyrifera P11B4 male)back to top |