mRNA_M-pyrifera_M_contig106832.1469.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A7S3NPS9_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPS9_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.750e-24 Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 22 ADPMAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAPFNAKQAFATELQHLALAEY 432 A+PM MM GM SQ + MV M + +I+ F GFVLV++PF LT+RF+ M QR +DL LD SYVSS SWY L ++G R L +L+G + S+AL EA+ Q + ++GG + PF+A A+ E Q L +A++ Sbjct: 103 ANPMGMMDGMKSQALYMVPNMVMMSVISYFFHGFVLVKIPFPLTNRFKVMLQRGVDLATLDVSYVSSLSWYFLVLFGLRGLFKILLG-EDSDALDEARATQMSMGMMHSVGGAH--GPFDAPAAYKHERQELQMAQH 236
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A813BM54_9DINO (ER membrane protein complex subunit 3 (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BM54_9DINO) HSP 1 Score: 99.8 bits (247), Expect = 2.670e-23 Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 25 DPMAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQ 324 +PMA M GM +Q M + G+GY FSGFVLVR+PF LT+RF+ MTQ DL L LD S+VSS SWY++ +YG R L+ L MG S+A+ EA+ +Q Sbjct: 67 NPMASMDGMKTQVAFMATNYGMGYWTQAFFSGFVLVRMPFPLTTRFKQMTQSDLALATLDTSFVSSLSWYMIVLYGIRTLVMLAMGNSSSDAMDEAKMMQ 166
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A812NY21_9DINO (ER membrane protein complex subunit 3 n=2 Tax=Sar TaxID=2698737 RepID=A0A812NY21_9DINO) HSP 1 Score: 95.5 bits (236), Expect = 9.270e-21 Identity = 57/142 (40.14%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 10 ETAAADPMAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLD--LLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAPFNAKQAFATELQHLALAE 429 E DP MM M Q V +S +G YL+ +LF+GFVLV++PF+LT+RFR +TQRD+ L L+P+ V+SFSWY++C+YG + ++ L++G + SE ++ + Q +GGG P+N AF E L +A+ Sbjct: 149 EAPPMDPSGMMGPMQMQAVYYLSNIGSLYLVQSLFTGFVLVKLPFSLTARFRGVTQRDMAQALELLNPALVTSFSWYMMCLYGCQGIITLVLGGKSSEFADQSAMMMSQMG----MGGGRQQ-PWNPGAAFKAERTQLRIAQ 285
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A835YX73_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX73_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.210e-20 Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 4 DPETAAADPMAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAPFNAKQAFATELQHLALA 426 DP A +DP MM + + +V+ M +G + +GFV+V+VPF LTSRF+ M QR +++ LDPSYVSS SWY+L M+G R L+ L +G S + Q+ Q+ Q Q +G G P F+AK+AF E L ++ Sbjct: 110 DPTAAISDPSKMMGPLINNAGFVVTNMFMGAFSSYFMAGFVMVKVPFPLTSRFKVMLQRGVEISTLDPSYVSSVSWYMLVMFGMRNLIMLALG--ESGSAQDEQRAMQAQ-----MGMGAPQPMFDAKKAFGEESTILGIS 243
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A7R9TN03_9VIRI (ER membrane protein complex subunit 3 n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TN03_9VIRI) HSP 1 Score: 86.7 bits (213), Expect = 8.630e-19 Identity = 55/137 (40.15%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 22 ADPMAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAPFNAKQAFATELQHLALAEY 432 +DP MM + M+V M G +N FSGFV+ ++PF LT RFR M QR +DL LD +YVSS SWY L ++G R L LL+G SEA+ + + + QQ + +G G + +A+A ELQ + L + Sbjct: 3 SDPTMMMDMLKKNVHMIVPQMLTGAWVNFFFSGFVIAKIPFPLTQRFRTMLQRGIDLQSLDVTYVSSLSWYFLNLFGLRGLNQLLLGASASEAIDDTKLMGMQQQMM--MGAG-----MDTSKAYAAELQQMELMRH 132
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A7S4A988_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A988_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.030e-17 Identity = 46/86 (53.49%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 25 DPMAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMG 282 DPMAMM GM + MV M + +I+ FSGFVLV+VPF +T RF+ M QR +DL LD SYVSS SWY L M+G R L +++G Sbjct: 106 DPMAMMDGMKGNMLYMVPNMLMMTVISFFFSGFVLVKVPFPVTQRFKQMLQRGVDLATLDTSYVSSLSWYFLLMFGLRGFLRVVLG 191
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A059LMQ4_9CHLO (ER membrane protein complex subunit 3 (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LMQ4_9CHLO) HSP 1 Score: 84.3 bits (207), Expect = 4.760e-17 Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 70 MVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAP-FNAKQAFATELQHLAL 423 +V MG+G L+N FSGF+L RVP AL+ +FRAM QR +DL LDPSY +S S+YIL ++G + L+ +AL +A + Q Q +GGG AP F+A++AF +E Q L L Sbjct: 117 LVPQMGMGALVNYFFSGFILGRVPLALSPKFRAMLQRGIDLPALDPSYFTSLSFYILALFGLGGIFRLVFA---EDALNDAAMMAQMQPG---MGGGAAPAPMFDAQKAFESEQQALDL 229
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A2P6V5Z6_9CHLO (ER membrane protein complex subunit 3 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V5Z6_9CHLO) HSP 1 Score: 84.3 bits (207), Expect = 5.760e-17 Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 37 MMKGMGSQPVM-MVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAPFNAKQAFATELQHLALAEYK 435 MM+GM Q + +V + LG ++N FSGF+L RVPFAL+ +FR M QR +DL LDPSY +S S+ IL ++G R ++ L+ +A+ +AQQ+ Q + + NPM F+A++AFA E L L E++ Sbjct: 113 MMQGMMRQQLTGLVPQLALGAMVNFFFSGFILGRVPFALSPKFRMMLQRGIDLPSLDPSYFTSLSYCILLLFGLRGVMMLMF---REKAINDAQQMMAMQQQMNPMA--NPMG-FDAEKAFAAERAALGLVEHR 240
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A8J8P6M2_HALGN (ER membrane protein complex subunit 3 n=2 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P6M2_HALGN) HSP 1 Score: 84.3 bits (207), Expect = 8.690e-17 Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 10 ETAAADPMAMMK-----GMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAPFNAKQAFATELQHLALAEYK 435 + AAA+PMAMM M Q V + M L +I +FSGF++ +VPF L +F+A+TQ+ L+LL LDPSYVSS SW L ++G + +++L++G SE L E + A GGG N + F +E ++ + YK Sbjct: 132 KVAAANPMAMMNPDMMGNMMKQNVQQMFNMFLFTVIGNIFSGFIIAQVPFPLGQKFKAITQQGLNLLALDPSYVSSMSWCFLLIFGLQGVMSLILG--DSEGLDEMNNMMMGPQAQMMAGGGMGGEQKNFQALFKSEKENYEILNYK 276
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Match: A0A7S0YVR0_9CRYP (ER membrane protein complex subunit 3 (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YVR0_9CRYP) HSP 1 Score: 83.6 bits (205), Expect = 1.500e-16 Identity = 52/144 (36.11%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 4 DPETAAADPMAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRDLDLLWLDPSYVSSFSWYILCMYGARPLLALLMGLQHSEALQEAQQLQQQQAAVAAIGGGNPMAPFNAKQAFATELQHLALAEYK 435 DP +DP MM+ S +M+ M + +I+ FSGFV+V++PF L+ +F++MTQR ++L LD ++VSSFSWY+L G +++L++G + +A +QQQ A GG P+ + + +A E+++L +AE+K Sbjct: 140 DPIAMMSDPNMMMQQQKSMFTVMLPQMVMMGVISYFFSGFVMVKIPFPLSLKFKSMTQRGIELATLDVTFVSSFSWYVLVSVGISGVMSLILG--RPSTVNDATAMQQQMQMQA---GGQPI---DTPKLYAAEMENLNMAEHK 275 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106832.1469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106832.1469.1 >prot_M-pyrifera_M_contig106832.1469.1 ID=prot_M-pyrifera_M_contig106832.1469.1|Name=mRNA_M-pyrifera_M_contig106832.1469.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp MAMMKGMGSQPVMMVSTMGLGYLINTLFSGFVLVRVPFALTSRFRAMTQRback to top mRNA from alignment at M-pyrifera_M_contig106832:106..540+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106832.1469.1 ID=mRNA_M-pyrifera_M_contig106832.1469.1|Name=mRNA_M-pyrifera_M_contig106832.1469.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig106832:106..540+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106832:106..540+ >mRNA_M-pyrifera_M_contig106832.1469.1 ID=mRNA_M-pyrifera_M_contig106832.1469.1|Name=mRNA_M-pyrifera_M_contig106832.1469.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig106832:106..540+ (Macrocystis pyrifera P11B4 male)back to top |