mRNA_M-pyrifera_M_contig106772.1454.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A1Z8WW83_9GAMM (Bac_luciferase domain-containing protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WW83_9GAMM) HSP 1 Score: 264 bits (674), Expect = 4.920e-85 Identity = 129/199 (64.82%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 13 FSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFV 609 FS QGIS ERG+RL EG+ IVQ+LL GESVT +G++ L D++ISPPALQ PHPPIWLGA+APKAIERAA++GFH+QSVGP+ELN YD ALV GR P+++ IA RAVYVA SR QAWE A+ LHY+TE Y +WFAEA D+ G D A LP+VD+MI+ Q F+F GEDAIVGTP DA +MI++Y +RGR TH V Sbjct: 118 FSDQGISHTERGSRLQEGMAIVQKLLSGESVTHEGKYYYLNDIKISPPALQKPHPPIWLGAIAPKAIERAAKMGFHFQSVGPAELNTAYDGALVAAGRDPQEYNIAAQRAVYVAKSRSQAWEECARSLHYLTECYAKWFAEANDQEGDDQALKGLPTVDEMIKAQSFNFFGEDAIVGTPDDAKQMISDYVSRGRFTHMV 316
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A2E6E5A7_9ACTN (Bac_luciferase domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6E5A7_9ACTN) HSP 1 Score: 250 bits (639), Expect = 9.680e-80 Identity = 127/199 (63.82%), Postives = 147/199 (73.87%), Query Frame = 1 Query: 13 FSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFV 609 FS QGIS ERG RL G+ IVQ LL GESVT DG++ L D+QISPPALQ PHPPIWLGA+APKAIERAA++GFH+QSVGP+ELNA YD AL GR P++ IA AVYVA R QAWE A LHY+TE Y WFAEA D+ G D A LP+VD+MI+ + F+F GEDAIVGTP DA MIA+Y +RGR T V Sbjct: 118 FSDQGISHTERGGRLQXGMAIVQXLLXGESVTIDGKYYYLNDIQISPPALQRPHPPIWLGAIAPKAIERAAKMGFHFQSVGPTELNAAYDGALTAAGRXPQEXNIATMXAVYVAQXRSQAWEECAXXLHYLTECYGXWFAEAXDKEGDDKALEGLPTVDEMIKAEAFNFFGEDAIVGTPDDAKXMIADYVSRGRFTXMV 316
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A1Z9UIB9_9GAMM (Bac_luciferase domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UIB9_9GAMM) HSP 1 Score: 234 bits (597), Expect = 2.140e-73 Identity = 114/203 (56.16%), Postives = 143/203 (70.44%), Query Frame = 1 Query: 1 RPGGFSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFV 609 RP F QGI+ RG RL EGV+I+QRLL E VT DG+++ L ++QI PPA+Q PHPPIW+GA+APKA ERAA++G H+Q P E YDE L G P DF +AQ R V+VA SR++AWE AK LHY Y +WFAEA D G D + + SV+++IRTQHFDF GED+IVGTP D +MIA+Y++RGRMTH V Sbjct: 114 RPKEFDDQGIASASRGRRLKEGVEILQRLLSDELVTYDGKYNHLKEIQIVPPAVQRPHPPIWIGAIAPKAXERAAKMGMHFQCTAPVESVKYYDEXLEAAGXNPSDFSVAQLRWVHVAKSRDEAWENCAKALHYTNTCYSKWFAEANDSPGDDQGLDDIKSVEEIIRTQHFDFFGEDSIVGTPSDVRDMIADYQSRGRMTHLV 316
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A1X1ZTT6_9MYCO (Bac_luciferase domain-containing protein n=1 Tax=Mycobacterium nebraskense TaxID=244292 RepID=A0A1X1ZTT6_9MYCO) HSP 1 Score: 229 bits (583), Expect = 2.780e-71 Identity = 111/204 (54.41%), Postives = 144/204 (70.59%), Query Frame = 1 Query: 1 RPGGFSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFVC 612 R G F QGI ER R+ E + +V+RLL GESVT DGR+++L +++ISPPALQ PHPPIW+G APKAIERAAR+G H+ + GP N +YD+AL HG P+DF+IA R +VAP+REQAWE+AAKPL YM Y++W AEA SG+ + LPSV+++IR Q FDF E A+VGTP D + ++EYR R+T VC Sbjct: 114 RKGEFDDQGIPARERAGRMQENLTVVRRLLSGESVTVDGRYTRLHNIRISPPALQRPHPPIWVGGTAPKAIERAARMGLHFLTGGPGSAN-LYDDALRAHGNDPDDFRIAAMRPTFVAPTREQAWELAAKPLRYMAAGYMQWTAEAEVASGAPSQAIALPSVEEIIRDQSFDFFAEPALVGTPDDVIGQVSEYRAHSRLTDLVC 316
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A3D5DFD4_9GAMM (LLM class flavin-dependent oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFD4_9GAMM) HSP 1 Score: 227 bits (579), Expect = 1.110e-70 Identity = 113/200 (56.50%), Postives = 140/200 (70.00%), Query Frame = 1 Query: 13 FSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFVC 612 F+ QGISP ERG RL EG++I+QRLL E V+ DG+FS+L ++I PPALQ PHPPIWLGA+A KAIERAA++G H+Q GP+ YD L GR P+++ AQ R V+VA SREQAWE AA+ LHY Y +WF EA+D + D LPSV+DM+ Q FD GE AIVGT +DA MIA+Y +RGR TH VC Sbjct: 118 FADQGISPTERGPRLREGIEIIQRLLSDEEVSIDGKFSKLNKIRIVPPALQKPHPPIWLGAVAEKAIERAAKMGLHFQVTGPTSAVEHYDACLEAAGRNPQEYNTAQLRWVHVAQSREQAWETAAESLHYTASCYAKWFREASDGTEHDEGMANLPSVNDMVSKQEFDMFGEPAIVGTVEDAKGMIADYVSRGRCTHLVC 317
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A523P383_9PROT (LLM class flavin-dependent oxidoreductase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P383_9PROT) HSP 1 Score: 221 bits (564), Expect = 5.750e-68 Identity = 108/200 (54.00%), Postives = 138/200 (69.00%), Query Frame = 1 Query: 13 FSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFVC 612 FS QGI+ ERGARL EG+ IVQRLL GE VT DG+F++L ++I PPALQ PHPP+WLGA+A K+IERAA++GFH+Q VGP + YD L GR P DF AQ R ++VA SR+QAWE LH+ Y +WFAEA D+ G D A +PSV++++ + + E IVGTP+DA MIA+Y RGR+TH VC Sbjct: 155 FSDQGITHTERGARLREGIDIVQRLLSGEEVTIDGKFNRLNKIRIVPPALQQPHPPMWLGAVAEKSIERAAKMGFHFQVVGPPAMVKHYDACLEAAGRNPRDFNTAQLRFIHVARSRDQAWEAVVDSLHHTALNYAQWFAEANDKPGDDQAAANMPSVEELLAQRKLEMFDEQVIVGTPEDARGMIADYLQRGRVTHLVC 354
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A1A2TKS5_9MYCO (Bac_luciferase domain-containing protein n=1 Tax=Mycobacterium mantenii TaxID=560555 RepID=A0A1A2TKS5_9MYCO) HSP 1 Score: 218 bits (555), Expect = 4.620e-67 Identity = 110/204 (53.92%), Postives = 136/204 (66.67%), Query Frame = 1 Query: 1 RPGGFSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFVC 612 R G F QGI ER R+ E + +V+RLL GESVT DGR++ L DV+I PPALQ PHPPIW+G APKAIERAAR+G H+ + G IYD+AL HG P DF++A R +VAP+REQAW +AAKPL YM Y +W AEA SG+ LPSV+++IR Q FDF E A+VGTP D + IA+YR R+T VC Sbjct: 114 RKGEFDDQGIPARERAGRMQENLTVVRRLLSGESVTIDGRYNSLRDVRIRPPALQRPHPPIWVGGTAPKAIERAARMGLHFLTGGAGSAK-IYDDALRAHGNDPNDFRVAAMRPAFVAPTREQAWNLAAKPLRYMAAGYQQWTAEADVASGAPRQTAALPSVEEIIRNQTFDFFTERALVGTPDDVIAQIADYREHARLTDLVC 316
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A1X0JRL3_9MYCO (Bac_luciferase domain-containing protein n=3 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A1X0JRL3_9MYCO) HSP 1 Score: 218 bits (554), Expect = 6.350e-67 Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 1 Query: 1 RPGGFSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFV 609 RPG F AQGI ER +R+ E + +++RLL GE+VT DG++++L +++ISPP LQ PHPPIW+G APKAIERAA +G H+ S GP A+YD+AL +GR P DF +A +VAP+ +QAWEIAA+PL YMT YLRW AEA S D+ TLPSV++++R Q DF G D +VG+P+D +E I YR+ R+TH V Sbjct: 112 RPGEFDAQGIPARERASRMQESLPLLRRLLSGENVTFDGKYNRLNNIRISPPVLQKPHPPIWVGGTAPKAIERAANMGVHFLSGGPGSA-AVYDDALRANGRDPRDFHVAATLPTFVAPTTQQAWEIAAEPLRYMTAGYLRWNAEAKGASTGDSP--TLPSVEEIVRRQSMDFFGGDMLVGSPQDVIEKIERYRSGARLTHLV 311
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: A0A100ZER3_9MYCO (Bac_luciferase domain-containing protein n=2 Tax=Mycolicibacterium TaxID=1866885 RepID=A0A100ZER3_9MYCO) HSP 1 Score: 217 bits (553), Expect = 8.990e-67 Identity = 108/203 (53.20%), Postives = 139/203 (68.47%), Query Frame = 1 Query: 1 RPGGFSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFV 609 RPG F QGI ER +R+ E + IV+RLL GE+VT DG++S L D++I+PPALQ PHPP+W+G APKAIERAA +G H+ S GP A+YD+AL HGR P DF +A YVA +REQAWEIAA+PL YM YL+W AEA + +DA LPS +++++ Q DF GED +VG+P D +E I YR R+TH V Sbjct: 112 RPGEFDDQGIPARERASRMRESLPIVRRLLSGENVTIDGKYSNLNDIRITPPALQQPHPPMWVGGTAPKAIERAAAMGMHFLSGGPGSA-ALYDDALRAHGRNPRDFHVAATVPTYVARTREQAWEIAAEPLRYMAASYLKWTAEA--KGIADADLPALPSAEEIVKRQSMDFFGEDMLVGSPHDVIEKIETYRAGARLTHLV 311
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Match: UPI0009F41F49 (LLM class flavin-dependent oxidoreductase n=1 Tax=Mycobacterium malmoense TaxID=1780 RepID=UPI0009F41F49) HSP 1 Score: 214 bits (546), Expect = 1.050e-65 Identity = 103/204 (50.49%), Postives = 136/204 (66.67%), Query Frame = 1 Query: 1 RPGGFSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISPPALQLPHPPIWLGALAPKAIERAARLGFHYQSVGPSELNAIYDEALVKHGRRPEDFQIAQARAVYVAPSREQAWEIAAKPLHYMTEQYLRWFAEAADRSGSDAAENTLPSVDDMIRTQHFDFLGEDAIVGTPKDAVEMIAEYRTRGRMTHFVC 612 R G F QG+ ER R+ E + +V+RLL GE VT DGR+++L D++ISPPALQ PHPPIW+G APKA+ERAAR+G H+ + GP N YD+AL +G+ P+DF++A +VAP RE+AWE+AAKPLHYM Y W AEA + + LPSV +++R Q FDF G+ +VGTP D + I YR R R+T VC Sbjct: 114 RRGEFDDQGVPARERAGRMQENLTVVRRLLSGEPVTVDGRYTKLHDIRISPPALQRPHPPIWVGGTAPKAVERAARMGLHFLTGGPGSANT-YDDALRANGKDPQDFRVAAMWPTFVAPDRERAWELAAKPLHYMASGYTEWTAEAEGTADAPERIAALPSVGEIVRDQSFDFFGQPVLVGTPDDVIAQIEAYRARSRLTDLVC 316 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106772.1454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106772.1454.1 >prot_M-pyrifera_M_contig106772.1454.1 ID=prot_M-pyrifera_M_contig106772.1454.1|Name=mRNA_M-pyrifera_M_contig106772.1454.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp RPGGFSAQGISPGERGARLTEGVQIVQRLLRGESVTTDGRFSQLTDVQISback to top mRNA from alignment at M-pyrifera_M_contig106772:2..613+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106772.1454.1 ID=mRNA_M-pyrifera_M_contig106772.1454.1|Name=mRNA_M-pyrifera_M_contig106772.1454.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig106772:2..613+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106772:2..613+ >mRNA_M-pyrifera_M_contig106772.1454.1 ID=mRNA_M-pyrifera_M_contig106772.1454.1|Name=mRNA_M-pyrifera_M_contig106772.1454.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig106772:2..613+ (Macrocystis pyrifera P11B4 male)back to top |