mRNA_M-pyrifera_M_contig106762.1449.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A7S0F4P5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F4P5_9EUKA) HSP 1 Score: 242 bits (617), Expect = 4.650e-74 Identity = 128/206 (62.14%), Postives = 156/206 (75.73%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKLQAA-GRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAAL 615 LA L L D+ + F+Q+ Y RL + WL +L A D L+ + +L F F ALQP PGFAF+W+ELVSHR+FM LL + G PL++RLLV L +FL P+L A+L+PPVR+LY+G LRVLLVLLHDFPEFLCDYHFA C+VIPP+CIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEI+Q PR+LS+++AAL Sbjct: 136 LAALMSLLLRDYRSGD--FHQRAYFRLFSGWLFDLNAP-DPTLDPIQPQVLSAFCAAFHALQPARLPGFAFSWMELVSHRMFMPKLLLTKGQKGWPLMQRLLVGLFKFLHPYLSAAELSPPVRMLYRGALRVLLVLLHDFPEFLCDYHFAFCDVIPPSCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEISQPPRILSSYSAAL 338
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A7S2DDU9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DDU9_9EUKA) HSP 1 Score: 246 bits (627), Expect = 2.640e-73 Identity = 129/207 (62.32%), Postives = 152/207 (73.43%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKLQAA-GRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAALE 618 LA L L +D P+ FNQ+ Y R+L SWL EL A D L+ + +L F F ALQP PGFAFAWLEL+SHR+FM LL + G P ++RLLVAL FL+P+L +L+ P R LY+G LRVLLVLLHDFPEFLCDYHFALC+VIPP CIQMRNL+LSAFPRNMRLPDPFTPNLKVD+LPEI+Q PR+LS+ A LE Sbjct: 411 LAALMTHLLKTYDTRPQDFNQRAYLRILGSWLFELNAP-DPALDQIQPQVLSAFAAAFLALQPSRVPGFAFAWLELISHRMFMPKLLLAKGQRGWPHLQRLLVALFSFLQPYLSATELSAPTRTLYRGALRVLLVLLHDFPEFLCDYHFALCDVIPPTCIQMRNLVLSAFPRNMRLPDPFTPNLKVDMLPEISQPPRILSSVPAPLE 616
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A176WFJ4_MARPO (Uncharacterized protein n=3 Tax=Embryophyta TaxID=3193 RepID=A0A176WFJ4_MARPO) HSP 1 Score: 249 bits (637), Expect = 5.490e-73 Identity = 128/206 (62.14%), Postives = 154/206 (74.76%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKLQAAGRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAALE 618 L V + D D F+ +PY RL +WLM+ + D LE+ + +L F ALQP PG++FAWLEL+SHR+FM LL G PL +RLLVAL +F+EP+LR A L+ PVRLLYKGTLRVLLVLLHDFPEFLCDYHF+ C+VIPP+CIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEI+Q+PR+LS+ AAL+ Sbjct: 2073 LNVTVRVIQRDADEKKTTFHPRPYFRLFVTWLMDF-NSADPALESSNYQVLTAFGNALLALQPLRVPGWSFAWLELISHRIFMPKLLLQNQKGWPLFQRLLVALFKFMEPYLRNADLSDPVRLLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEISQAPRILSDVEAALK 2277
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A2D4H9Q9_MICLE (Not1 domain-containing protein (Fragment) n=2 Tax=Colubroidea TaxID=34989 RepID=A0A2D4H9Q9_MICLE) HSP 1 Score: 228 bits (580), Expect = 2.240e-70 Identity = 116/207 (56.04%), Postives = 146/207 (70.53%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKL--QAAGRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAAL 615 L ++ L DHD F Q PYHR+ L+EL A + LE + + L F F L+P APGF +AWLEL+SHR+F+A +L Q G P+ +LL+ L ++L PFLR +L P+++LYKGTLRVLLVLLHDFPEFLCDYH+ C+VIPP CIQ+RNLILSAFPRNMRLPDPFTPNLKVD+L EIN +PR+L+N T + Sbjct: 158 LGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAP-EHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVM 363
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A1U8I0Y6_GOSHI (CCR4-NOT transcription complex subunit 1-like n=2 Tax=Gossypium TaxID=3633 RepID=A0A1U8I0Y6_GOSHI) HSP 1 Score: 232 bits (591), Expect = 2.600e-70 Identity = 123/207 (59.42%), Postives = 146/207 (70.53%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKLQAA-GRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAALE 618 L V + D + +FN +PY RL +WL++L + D + + +L F F LQP P F FAWLELVSHR FM LL + G P ++RLLV LL+FLEPFLR A+L PV LYKGTLRVLLVLLHDFPEFLCDYHF C+VIPP+CIQMRN+ILSAFPRNMRLPDP TPNLK+DLLPEI +SPR+LS AAL+ Sbjct: 109 LTVTVRFIQKDAEDKKASFNPRPYFRLFINWLLDL-GSLDPVTDGANFQILTAFANTFHVLQPLKVPSFCFAWLELVSHRTFMPKLLTGNSQKGWPYIQRLLVDLLQFLEPFLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRESPRILSEVDAALK 314
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A3KN43_BOVIN (CNOT1 protein (Fragment) n=3 Tax=Euteleostomi TaxID=117571 RepID=A3KN43_BOVIN) HSP 1 Score: 227 bits (579), Expect = 5.960e-70 Identity = 115/197 (58.38%), Postives = 143/197 (72.59%), Query Frame = 1 Query: 31 DHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKL--QAAGRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAAL 615 DHD F Q PYHR+ L+EL A + LE + + L F F L+P APGF +AWLEL+SHR+F+A +L Q G P+ +LL+ L ++L PFLR +LT P+++LYKGTLRVLLVLLHDFPEFLCDYH+ C+VIPP CIQ+RNLILSAFPRNMRLPDPFTPNLKVD+L EIN +PR+L+N T + Sbjct: 4 DHDVRQSEFQQLPYHRIFIMLLLELNAP-EHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVM 199
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A388JZX4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JZX4_CHABU) HSP 1 Score: 241 bits (614), Expect = 6.780e-70 Identity = 125/206 (60.68%), Postives = 150/206 (72.82%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKL-QAAGRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAAL 615 L V+ + D D +FN +PY RL +W M+ L++ + +L F LQP PGF+FAWLELVSHR+ M+ LL+ Q G PL ++LLVAL +F+EP+LR A L+ PVRLLYKGTLRVLLVLLHDFPEFLCD HF+ C+VIPP+CIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEI+QSPR+LS AL Sbjct: 2137 LGVMLKVILRDADEKKMSFNPRPYFRLFVNWFMDFNQPDPNNLDSNNFLVLTAFGSALYGLQPLRVPGFSFAWLELVSHRMLMSKLLQANQQKGWPLFQKLLVALFKFMEPYLRNADLSEPVRLLYKGTLRVLLVLLHDFPEFLCDNHFSFCDVIPPSCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEISQSPRILSEVDLAL 2342
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A7S0IL62_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IL62_MICPS) HSP 1 Score: 231 bits (588), Expect = 8.140e-70 Identity = 125/205 (60.98%), Postives = 147/205 (71.71%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLL-KLQAAGRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAA 612 LA + D D AFN +PYHR L +ME+ A D L++ +L F ALQP PGFAF+WLELVSHR F+ LL G PL+++LL A+L+FLEP LR A+LT VRLLY+GTLR+LLVLLHDFPEFLCD+HF LC+VIPP CIQMRNL+LSAFPRNMRLPDPFTPNLKVDLLPEI QSPRV++ A Sbjct: 130 LAAVVRLALKDVDERGAAFNPRPYHRALTGLMMEMHAP-DAALDSSHPQVLASFASALLALQPLRIPGFAFSWLELVSHRCFLPRLLVDHNRRGWPLLQKLLTAVLKFLEPSLRGAELTETVRLLYRGTLRLLLVLLHDFPEFLCDHHFNLCDVIPPNCIQMRNLVLSAFPRNMRLPDPFTPNLKVDLLPEITQSPRVITGEADA 333
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A2G3DJ81_CAPCH (CCR4-NOT transcription complex subunit 1 n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3DJ81_CAPCH) HSP 1 Score: 232 bits (592), Expect = 8.600e-70 Identity = 124/207 (59.90%), Postives = 149/207 (71.98%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKLQAA-GRPLVKRLLVALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAALE 618 LA+ + D D FN +PY RL +WL++L ++ D + + +L F ALQP PGF+FAWLELVSHR FM LL A G P +RLLV L +F+EPFLR A+L PV+ LYKGTLRVLLVLLHDFPEFLCDYHF+ C+VIPP+CIQMRN+ILSAFPRNMRLPDP TPNLK+DLL EI+QSPR+LS AAL+ Sbjct: 182 LAITVRFIQKDADEKKMIFNPRPYFRLFINWLVDL-SSLDPVFDGANFHVLTALANAFHALQPLKVPGFSFAWLELVSHRSFMPKLLAGNAQKGWPYFQRLLVDLFQFMEPFLRNAELGEPVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALK 387
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Match: A0A7S4BJK2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJK2_CHRCT) HSP 1 Score: 240 bits (612), Expect = 1.240e-69 Identity = 132/212 (62.26%), Postives = 154/212 (72.64%), Query Frame = 1 Query: 1 LAVLAHRLTSDHDAA-----PEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLLQEFHQCFAALQPRAAPGFAFAWLELVSHRLFMAGLLKLQA-AGRPLVKRLLV-ALLRFLEPFLRRAQLTPPVRLLYKGTLRVLLVLLHDFPEFLCDYHFALCNVIPPACIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEINQSPRVLSNHTAAL 615 L+V H L H A P AFNQ+ Y RL SWL +L A D L+A+ +L F F AL+P PGFAFAWLELVSHR+FM LL L+ G PL+++LLV L FL+PFL A+L+PPVR+LY+G LRVLLVLLHDFPEFLCDYHF C+ IPP+CIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEI Q PR+L+ + AL Sbjct: 1523 LSVTIHHLIRQHQAMQYEQRPHAFNQRAYLRLFGSWLFDLNAP-DPALDAIQPQILYAFCSAFNALKPSRLPGFAFAWLELVSHRMFMPKLLLLKGHKGWPLLQQLLVNGLFAFLQPFLAAAELSPPVRVLYRGALRVLLVLLHDFPEFLCDYHFFFCDAIPPSCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEIAQPPRILAPFSNAL 1733 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106762.1449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106762.1449.1 >prot_M-pyrifera_M_contig106762.1449.1 ID=prot_M-pyrifera_M_contig106762.1449.1|Name=mRNA_M-pyrifera_M_contig106762.1449.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp LAVLAHRLTSDHDAAPEAFNQQPYHRLLASWLMELLATGDKQLEALAWPLback to top mRNA from alignment at M-pyrifera_M_contig106762:8..625+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106762.1449.1 ID=mRNA_M-pyrifera_M_contig106762.1449.1|Name=mRNA_M-pyrifera_M_contig106762.1449.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig106762:8..625+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106762:8..625+ >mRNA_M-pyrifera_M_contig106762.1449.1 ID=mRNA_M-pyrifera_M_contig106762.1449.1|Name=mRNA_M-pyrifera_M_contig106762.1449.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig106762:8..625+ (Macrocystis pyrifera P11B4 male)back to top |