mRNA_M-pyrifera_M_contig106761.1448.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: A0A0L0G727_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G727_9EUKA) HSP 1 Score: 129 bits (325), Expect = 1.440e-32 Identity = 74/130 (56.92%), Postives = 91/130 (70.00%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFA-PSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLFG 387 VVASML+SP+MGPILAF+ GS+I + MV G + E SLL+CVV GF++ VF S WPT E SSRG WQA + + +A PSG GVALSI +SLVGVAISASLLPPAVN G++ +Y + G Sbjct: 288 VVASMLISPIMGPILAFTFGSIILDWKMVRHGFLMECVSLLMCVVTGFIIGLVFCTLGYDSWGWPTNEMSSRGTWQACLVSITIAIPSGAGVALSILGNNTSSLVGVAISASLLPPAVNAGILWAYAIVG 417
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: A0A7S1GAG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAG7_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.140e-30 Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLFG 387 +VASML+SPLM PIL F+LG+ + + GMV +G+ E LL+ +G L+ +F P+A WPT E SRGV +L+ G+ A PSGVGVAL T GG +LVGVAI+ASLLPP VN+GM L + FG Sbjct: 164 IVASMLLSPLMSPILGFTLGTALKDWGMVWAGIKTEVVGLLITFGIGMLIGIIFAPWAEQFTWPTGEMESRGVTSSLLIGVAFAVPSGVGVALCTTGGGSNALVGVAIAASLLPPVVNSGMCLVFSWFG 292
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: A0A0D2WJT9_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJT9_CAPO3) HSP 1 Score: 124 bits (311), Expect = 1.940e-30 Identity = 62/129 (48.06%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLFG 387 +VASMLVSP+MGPILA + GS+I ++ ++ +G+ +E L +C+ +GF++ ++ + P WPT+E ++RG W + G+ VA SG GVALS+ +SLVGVAISASLLPPAVN GM+ +Y ++G Sbjct: 621 IVASMLVSPIMGPILAVTFGSVIRDRHLITTGVRSEVIGLSICLAMGFIMGTIWTNWGPQFSWPTSEMAARGDWTGMYIGICVAIASGFGVALSVLGNNTSSLVGVAISASLLPPAVNAGMLFAYSIWG 749
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: A0A6G0WXB1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXB1_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.200e-29 Identity = 66/129 (51.16%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLFG 387 VVASML+SPLMGPIL S G I ++ M L+GL NE +L++ +++G +L V P+A L WPTAE SRG +L++G +VA+ SG GVAL+ ++ I+S+VG AI+A+LLPP VN G+ LSY + G Sbjct: 150 VVASMLLSPLMGPILGCSFGYAIRDRNMFLTGLSNELTALVITLMLGMILGIVLAPYADDLKWPTAEMRSRGQAVSLIFGAIVAALSGAGVALAESNANISSVVGTAIAAALLPPTVNCGICLSYAIIG 278
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: A0A6H5KJ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ96_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.700e-29 Identity = 70/129 (54.26%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLFG 387 VVA+MLVSP+MGP+LAF+ G+ I + + G + E+FSLL+CV VGFL+ V + F + WPT E +RG L+ G+++A PSG+ VALSI S + SLVGVAISASLLPPAVNTG+ L+ L G Sbjct: 677 VVAAMLVSPIMGPVLAFTFGTNIRDWSLAKKGFLVESFSLLICVGVGFLVGIVGVNFIEADTWPTHEMETRGNPWGLLTGIVIAIPSGMAVALSILSKNVNSLVGVAISASLLPPAVNTGLCLAVALIG 805
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: D7G144_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G144_ECTSI) HSP 1 Score: 120 bits (302), Expect = 3.140e-29 Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLFG 387 VVA+MLVSP+MGP+LAF+ G+ + + + G + E+FSLL+CV VGFL+ V + F + WPT E +RG L+ G+ +A PSG+ VALSI S + SLVGVAISASLLPPAVNTG+ L+ L G Sbjct: 658 VVAAMLVSPIMGPVLAFTFGTNVRDWSLAKKGFLVESFSLLICVGVGFLVGMVGVNFIEADTWPTHEMETRGNAWGLLTGIAIAIPSGMAVALSILSKNVNSLVGVAISASLLPPAVNTGLCLAVALIG 786
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: UPI000BA812C9 (uncharacterized protein LOC106469415 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA812C9) HSP 1 Score: 119 bits (298), Expect = 9.320e-29 Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 4 VASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSL---DWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMM 366 VASML+SPLMGPILA + G++I ++ + GL NE L VCVV GFL + F+ + +WPT+E + RG W++L GLL+A PSG GVALS+ G SLVGVAISASLLPPAVN G++ Sbjct: 277 VASMLISPLMGPILAGTFGAVIEDRSLRNQGLTNEIIGLSVCVVFGFLFGLICGNFSDTWGQGEWPTSEMAGRGYWRSLWVGLLIALPSGAGVALSVLGGNAGSLVGVAISASLLPPAVNAGIL 400
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: UPI000C773E0B (uncharacterized protein LOC111715259 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C773E0B) HSP 1 Score: 118 bits (296), Expect = 1.240e-28 Identity = 70/122 (57.38%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 4 VASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSL---DWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTG 360 VASMLVSPLMGPILA G++I +K + + G+ +E +LL+C+VVGFLL P + +WPT E SRG ++LV GL+VA PSG GVALS+ G SLVGVAISASLLPPAVN G Sbjct: 220 VASMLVSPLMGPILAGVFGAVIQDKKLAMKGVKHETQALLICIVVGFLLGLCICPVVQMISLPEWPTPEMISRGAPRSLVVGLMVAIPSGAGVALSVLGGNSDSLVGVAISASLLPPAVNAG 341
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: A0A7S3YPI9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPI9_9EUKA) HSP 1 Score: 116 bits (290), Expect = 6.270e-28 Identity = 67/128 (52.34%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLF 384 +VASMLVSPLMGPI++ + G++I + M+ G+ +E +L +C G L+A F F L WPT E +SRGV L+ G+++A PSGVGVALS+ S ASLVGVAISA+LLPPAVN G+ Y L+ Sbjct: 135 IVASMLVSPLMGPIVSATFGTVILDYKMIRLGVTSELVALALCFGTGVLVAVGFAHFGEELGWPTTEMASRGVPGGLIVGIVIALPSGVGVALSVLSNNSASLVGVAISAALLPPAVNVGLCWYYALY 262
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Match: A0A6V3KPS4_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3KPS4_9EUKA) HSP 1 Score: 116 bits (290), Expect = 8.660e-28 Identity = 67/128 (52.34%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 1 VVASMLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFIPFAPSLDWPTAEQSSRGVWQALVYGLLVASPSGVGVALSITSGGIASLVGVAISASLLPPAVNTGMMLSYGLF 384 +VASMLVSPLMGPI++ + G++I + M+ G+ +E +L +C G L+A F F L WPT E +SRGV L+ G+++A PSGVGVALS+ S ASLVGVAISA+LLPPAVN G+ Y L+ Sbjct: 135 IVASMLVSPLMGPIVSATFGTVILDYKMIRLGVTSELVALALCFGTGVLVAVGFAHFGEELGWPTTEMASRGVPGGLIVGIVIALPSGVGVALSVLSNNSASLVGVAISAALLPPAVNVGLCWYYALY 262 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106761.1448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106761.1448.1 >prot_M-pyrifera_M_contig106761.1448.1 ID=prot_M-pyrifera_M_contig106761.1448.1|Name=mRNA_M-pyrifera_M_contig106761.1448.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp MLVSPLMGPILAFSLGSLINEKGMVLSGLINEAFSLLVCVVVGFLLAFVFback to top mRNA from alignment at M-pyrifera_M_contig106761:118..504+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106761.1448.1 ID=mRNA_M-pyrifera_M_contig106761.1448.1|Name=mRNA_M-pyrifera_M_contig106761.1448.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig106761:118..504+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106761:118..504+ >mRNA_M-pyrifera_M_contig106761.1448.1 ID=mRNA_M-pyrifera_M_contig106761.1448.1|Name=mRNA_M-pyrifera_M_contig106761.1448.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig106761:118..504+ (Macrocystis pyrifera P11B4 male)back to top |