mRNA_M-pyrifera_M_contig10657.1424.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI) HSP 1 Score: 682 bits (1760), Expect = 4.910e-242 Identity = 337/496 (67.94%), Postives = 400/496 (80.65%), Query Frame = 1 Query: 1 MLVQGTMRGFTPFLLLLAATVGYTTGHVVSAHHHDGSRALSAVQEVSDVDVFYRRLDPEEGQCCGMCTQLILNPLVVVLLVSNGVTSAGDLNPVVLELAGITPVTIIIRITLIYTDNKASDPSQRLSLVFDSVVEPGDWNDTLCSYLEEDCVVFQSDGILMFAPDAPGGFATLSLDALTQFTADSDINIVSNTCDVRCQNPGECSTLDTSLEPSGGGILFGTPVQSTFNNGFCNPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGP-NSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485 M VQ TMRGFTPF+LLLA V ++TGH V+ HDG RALSAV+E +D+D+FYRRLDP GQCCGMCTQL LN +V LLVS +AGDLNP VL AG + III +T+++TDN A+DPS+ VF+ V+ P DW D CSYLE+DCVVF++D + MFAPDAPGGFATLSLDA+ + A++DIN++S C + C+N +C D+ L+P+ G+ FG QS FNNGFC P I+DDPH+TGLRGQ FDW G+DGGWYAFLST D+LQMNLRVTSHLP TFPERQLVTGVA+VTEGGH+I D+VDPLDL PTC + SAPCLVNGGLR+TVDGRE++QGAGE+ FDG IHITAVNLPLECQRFGD++MWGDL+ EQ+L R+LRS TV FDWL+ADSVMIAP WCVKYL+ELNGDVTALA ++S+HAVLRI +PNLSLRVNVGIN+E+EQTLQDGRVVPTASFWQMDVRVE A+ +A AKGML Sbjct: 11 MQVQKTMRGFTPFVLLLATKVDFSTGHAVNVLQHDGRRALSAVEEANDLDLFYRRLDPGPGQCCGMCTQLTLNSRIVELLVSGDDANAGDLNPAVLG-AGAS-FNIIIIMTIVFTDNAAADPSKVEMNVFEVVITPDDWTDVPCSYLEDDCVVFENDELFMFAPDAPGGFATLSLDAVNEINANTDINVISTKCTLVCENASDC---DSDLDPADDGVDFGVIQQSMFNNGFCTPRIWDDPHLTGLRGQHFDWYGQDGGWYAFLSTPDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGSAPCLVNGGLRITVDGREQLQGAGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETV---FDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQDGRVVPTASFWQMDVRVEHAEGMATAKGML 498
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.280e-52 Identity = 105/260 (40.38%), Postives = 162/260 (62.31%), Query Frame = 1 Query: 709 IFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNS-APCLVNGGLRVTVDGRE---------EMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLA-DSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDVRVE 1449 ++ DPHM GLRGQR +WSG DGGWY+ + +L +N+RVT+ LP FP+RQL+T +A+++EG +S+V++V +P T P +PCL NGGLR+ VDG+E +M A DG + ++A NLP+EC++FG H +W + ++ ++ R LR S+ +W+L D M A WC KY+ E + LAD+Q+NHA+ +I++P +++R+N G+N + + L DGRV+P FWQMDV ++ Sbjct: 12 MWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVENPY----TIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVA-----DGTMTMSASNLPVECRQFGGHRIWARMYQD--ILEDRRQLRGG---ESLEEWILRYDQNMPARRWCAKYIAEND-----LADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGID 251
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.690e-50 Identity = 108/280 (38.57%), Postives = 167/280 (59.64%), Query Frame = 1 Query: 649 GILFGTPVQSTFNNGF--CNP--VIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNS-APCLVNGGLRVTVDGREEMQGAGEFH-----FDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLA-DSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDVRVE 1449 G+ F + +T F C P + DPHM GLRGQR DWSG DGGWY+ + + ++ +N+R+T+ LP FP+RQL+T +AV+++G HS+V++V +P T + P +PCL NGGLR+ VD +++ F DG + +++ NLP+ECQ+FG +W + ++ M GR R S+ +W+L D M AP WC KY+ E + LAD+QS+HA+ +I++P +++R+N G+N + L DGRV+P FWQM V ++ Sbjct: 87 GVCFEPGLSATCEASFSVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKG-HSVVIEVENPY----TVVTNGCPEGVSPCLANGGLRIIVDS-QQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQD---MIEGR--RELHGDESLEEWILKYDHGMAAPGWCAKYIAEND-----LADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMD 350
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE) HSP 1 Score: 176 bits (447), Expect = 1.200e-47 Identity = 102/268 (38.06%), Postives = 145/268 (54.10%), Query Frame = 1 Query: 700 NPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREE--MQGAGE-FHFDGG-IHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGR--VVPTASFWQMDVRVEDAKDIAIAKGML 1485 +P + D HM GL GQ DW GED GWY L E Q+N RVT+ +P FP RQLV+GV++ + G S+VV+V +P+ E +S SAPCL G LR+ VDG E +Q E GG + +++ NLP EC+ FG +W + M+ RS T DW+L M AP WC + E ++ L+ +QSN A+LR+E+ +++RV+VG+N + DG +VP FWQ D+ E+ + GML Sbjct: 4 DPQVSGDSHMVGLLGQEIDWYGEDSGWYCLL-VNSEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSST---SAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWA---AQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQR--LSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGELGGML 262
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 2.200e-47 Identity = 105/254 (41.34%), Postives = 150/254 (59.06%), Query Frame = 1 Query: 709 IFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPL--DLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFH------FDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDV 1440 I DDPHM GL GQ DW G DG WY+F+ D +L++N+R+T+ LP FP+RQLVTG++V++EG HS+V++V +P DL C + PCL NGGL VTVDG + + G H GGI ++A NLP++C +FG H +W + + R LR+ S DW+L+ + M A WC +Y+ E L +QS+HA+ +I +P + +R+NVGI + + DGRV+P WQMDV Sbjct: 401 ICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEG-HSLVLEVTNPYSTDLNDGCPDGS---PTPCLANGGLSVTVDGEKNV---GLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWA---RHYEAILARRKLRAQ----SFEDWVLSFTDMAAHDWCTEYISE-----KGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDV 635
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE) HSP 1 Score: 162 bits (409), Expect = 2.000e-41 Identity = 95/266 (35.71%), Postives = 145/266 (54.51%), Query Frame = 1 Query: 703 PVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGG----HSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGRV-VPTASFWQMDVRVEDAKDIAIAKGML 1485 P DPHMTG GQ+FD++GEDGG+YA +S + MN+RVTS +P + PE +TG++++T HSIV++V +P D+E C A P CL +G LRV ++G+EE+ G G+ +TAVNLP EC+ FG W E+K + R+ R G S+ DWLL D C++Y+ + G L +QS HA +I +P ++R++ G + R +P + WQM++ ++ + A G+L Sbjct: 85 PRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVP-SLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACPAGVSP----CLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYW-----ERKKLENARHGRHLGE-QSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGIL 339
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE) HSP 1 Score: 159 bits (401), Expect = 3.600e-41 Identity = 92/250 (36.80%), Postives = 142/250 (56.80%), Query Frame = 1 Query: 709 IFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLA-DSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDVRVE 1449 I+ DPHM GL GQR +WSG DGGWY+ + + +L +N+RVT+ LP FP+RQL+T +A+++EG +S+V++V +P T + +PC NGGLR+ VDG H L Q G +W + ++ ++ R LR S+ +W+L D M A WC KY+ E + LAD+Q+NHA+ +I++P +++R+N G+N + L DGRV+P FWQ+DV ++ Sbjct: 17 IWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVKNPYT---TDTGGCPEDVSPCHANGGLRIIVDG----------------HEVDELLRFSRQMPGGKRIWARMYQD--ILEGRRQLRGG---ESLEEWILRYDQNMPARTWCAKYIAEND-----LADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGID 236
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE) HSP 1 Score: 142 bits (357), Expect = 5.220e-34 Identity = 89/271 (32.84%), Postives = 138/271 (50.92%), Query Frame = 1 Query: 700 NPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGG----HSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHT---GRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEE--LNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485 +P DPHMTG GQ+FD++G+DG WY +S + +N+RVT+ +P P+ +TG++++T+ G HS+V+ V DP LE +C A PCL NG L V++DG+E + G + ++ VNLP C+ FG W E +KL + GR L S + DW+L D C +Y+ + G L +S HA +I P ++R++ G Q Q G +P S WQM++ ++ A+G+L Sbjct: 51 DPTACGDPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSR-PDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCPAGV----TPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYW----ERKKLEYAQAGGRRLSSKDQ--DMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHG---RLHQIAQYG--LPDHSTWQMNLAIDSDSVGVGAQGVL 305
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.750e-32 Identity = 87/273 (31.87%), Postives = 140/273 (51.28%), Query Frame = 1 Query: 682 FNNGFCNPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGG----HSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVG-INSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485 F + + VI DPHMTG GQ+FD++GEDGGWY+ ++ + + +N+RVTS + PE +TG++V+T HSIV++V+DP +L+ +C A P CL +G L V +DG E + G + ++A NLP C+ FG W E+K + R R T S+ +W+L D CV+Y+ + + QS H +I +P ++R++ G ++ + D +P WQM++ + AKG+L Sbjct: 307 FGDESVDGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN-MNVNMRVTSPVAD-LPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCPAGVSP----CLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYW-----ERKKLENARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGIL 568
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE) HSP 1 Score: 132 bits (332), Expect = 5.160e-31 Identity = 91/282 (32.27%), Postives = 142/282 (50.35%), Query Frame = 1 Query: 703 PVIFD---DPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSH---LPKTFPERQLVTGVAVVTE------------GGHSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHT--GRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVG-INSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485 P +F PHMTG GQ+FD++GEDGGWY+ ++ + + +N+RVTS P++ ++L + V E HSIV++V +P L+ +C A P CL +G LRV +DG E + G G+ I+AVNLP C+ FG W E +KL + GR LR T S+ +W+L D CV+Y+ + + QS HA +I +P ++R++ G ++ + D +P WQM++ V+ + AKG+L Sbjct: 2 PPVFSLSGGPHMTGFLGQKFDFTGEDGGWYSIIADSN-MNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCPAGVSP----CLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYW----EHKKLEYATGGRQLR---TQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGIL 271 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10657.1424.1 >prot_M-pyrifera_M_contig10657.1424.1 ID=prot_M-pyrifera_M_contig10657.1424.1|Name=mRNA_M-pyrifera_M_contig10657.1424.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=495bp MLVQGTMRGFTPFLLLLAATVGYTTGHVVSAHHHDGSRALSAVQEVSDVDback to top mRNA from alignment at M-pyrifera_M_contig10657:708..3637- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10657.1424.1 ID=mRNA_M-pyrifera_M_contig10657.1424.1|Name=mRNA_M-pyrifera_M_contig10657.1424.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2930bp|location=Sequence derived from alignment at M-pyrifera_M_contig10657:708..3637- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10657:708..3637- >mRNA_M-pyrifera_M_contig10657.1424.1 ID=mRNA_M-pyrifera_M_contig10657.1424.1|Name=mRNA_M-pyrifera_M_contig10657.1424.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2970bp|location=Sequence derived from alignment at M-pyrifera_M_contig10657:708..3637- (Macrocystis pyrifera P11B4 male)back to top |