mRNA_M-pyrifera_M_contig10657.1424.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10657.1424.1
Unique NamemRNA_M-pyrifera_M_contig10657.1424.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 682 bits (1760), Expect = 4.910e-242
Identity = 337/496 (67.94%), Postives = 400/496 (80.65%), Query Frame = 1
Query:    1 MLVQGTMRGFTPFLLLLAATVGYTTGHVVSAHHHDGSRALSAVQEVSDVDVFYRRLDPEEGQCCGMCTQLILNPLVVVLLVSNGVTSAGDLNPVVLELAGITPVTIIIRITLIYTDNKASDPSQRLSLVFDSVVEPGDWNDTLCSYLEEDCVVFQSDGILMFAPDAPGGFATLSLDALTQFTADSDINIVSNTCDVRCQNPGECSTLDTSLEPSGGGILFGTPVQSTFNNGFCNPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGP-NSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485
            M VQ TMRGFTPF+LLLA  V ++TGH V+   HDG RALSAV+E +D+D+FYRRLDP  GQCCGMCTQL LN  +V LLVS    +AGDLNP VL  AG +   III +T+++TDN A+DPS+    VF+ V+ P DW D  CSYLE+DCVVF++D + MFAPDAPGGFATLSLDA+ +  A++DIN++S  C + C+N  +C   D+ L+P+  G+ FG   QS FNNGFC P I+DDPH+TGLRGQ FDW G+DGGWYAFLST D+LQMNLRVTSHLP TFPERQLVTGVA+VTEGGH+I  D+VDPLDL PTC  +     SAPCLVNGGLR+TVDGRE++QGAGE+ FDG IHITAVNLPLECQRFGD++MWGDL+ EQ+L    R+LRS  TV   FDWL+ADSVMIAP WCVKYL+ELNGDVTALA ++S+HAVLRI +PNLSLRVNVGIN+E+EQTLQDGRVVPTASFWQMDVRVE A+ +A AKGML
Sbjct:   11 MQVQKTMRGFTPFVLLLATKVDFSTGHAVNVLQHDGRRALSAVEEANDLDLFYRRLDPGPGQCCGMCTQLTLNSRIVELLVSGDDANAGDLNPAVLG-AGAS-FNIIIIMTIVFTDNAAADPSKVEMNVFEVVITPDDWTDVPCSYLEDDCVVFENDELFMFAPDAPGGFATLSLDAVNEINANTDINVISTKCTLVCENASDC---DSDLDPADDGVDFGVIQQSMFNNGFCTPRIWDDPHLTGLRGQHFDWYGQDGGWYAFLSTPDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGSAPCLVNGGLRITVDGREQLQGAGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETV---FDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQDGRVVPTASFWQMDVRVEHAEGMATAKGML 498          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.280e-52
Identity = 105/260 (40.38%), Postives = 162/260 (62.31%), Query Frame = 1
Query:  709 IFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNS-APCLVNGGLRVTVDGRE---------EMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLA-DSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDVRVE 1449
            ++ DPHM GLRGQR +WSG DGGWY+ +     +L +N+RVT+ LP  FP+RQL+T +A+++EG +S+V++V +P     T      P   +PCL NGGLR+ VDG+E         +M  A     DG + ++A NLP+EC++FG H +W  + ++  ++   R LR      S+ +W+L  D  M A  WC KY+ E +     LAD+Q+NHA+ +I++P +++R+N G+N + +  L  DGRV+P   FWQMDV ++
Sbjct:   12 MWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVENPY----TIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVA-----DGTMTMSASNLPVECRQFGGHRIWARMYQD--ILEDRRQLRGG---ESLEEWILRYDQNMPARRWCAKYIAEND-----LADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGID 251          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.690e-50
Identity = 108/280 (38.57%), Postives = 167/280 (59.64%), Query Frame = 1
Query:  649 GILFGTPVQSTFNNGF--CNP--VIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNS-APCLVNGGLRVTVDGREEMQGAGEFH-----FDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLA-DSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDVRVE 1449
            G+ F   + +T    F  C P   +  DPHM GLRGQR DWSG DGGWY+ +   + ++ +N+R+T+ LP  FP+RQL+T +AV+++G HS+V++V +P     T   +  P   +PCL NGGLR+ VD  +++     F       DG + +++ NLP+ECQ+FG   +W  + ++   M  GR  R      S+ +W+L  D  M AP WC KY+ E +     LAD+QS+HA+ +I++P +++R+N G+N +    L  DGRV+P   FWQM V ++
Sbjct:   87 GVCFEPGLSATCEASFSVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKG-HSVVIEVENPY----TVVTNGCPEGVSPCLANGGLRIIVDS-QQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQD---MIEGR--RELHGDESLEEWILKYDHGMAAPGWCAKYIAEND-----LADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMD 350          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.200e-47
Identity = 102/268 (38.06%), Postives = 145/268 (54.10%), Query Frame = 1
Query:  700 NPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREE--MQGAGE-FHFDGG-IHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGR--VVPTASFWQMDVRVEDAKDIAIAKGML 1485
            +P +  D HM GL GQ  DW GED GWY  L    E Q+N RVT+ +P  FP RQLV+GV++ +  G S+VV+V +P+  E    +S    SAPCL  G LR+ VDG E   +Q   E     GG + +++ NLP EC+ FG   +W     +   M+     RS    T   DW+L    M AP WC  +  E    ++ L+ +QSN A+LR+E+  +++RV+VG+N +      DG   +VP   FWQ D+  E+ +      GML
Sbjct:    4 DPQVSGDSHMVGLLGQEIDWYGEDSGWYCLL-VNSEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSST---SAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWA---AQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQR--LSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGELGGML 262          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.200e-47
Identity = 105/254 (41.34%), Postives = 150/254 (59.06%), Query Frame = 1
Query:  709 IFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPL--DLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFH------FDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDV 1440
            I DDPHM GL GQ  DW G DG WY+F+   D +L++N+R+T+ LP  FP+RQLVTG++V++EG HS+V++V +P   DL   C   +     PCL NGGL VTVDG + +   G  H        GGI ++A NLP++C +FG H +W       + +   R LR+     S  DW+L+ + M A  WC +Y+ E       L  +QS+HA+ +I +P + +R+NVGI  +    +  DGRV+P    WQMDV
Sbjct:  401 ICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEG-HSLVLEVTNPYSTDLNDGCPDGS---PTPCLANGGLSVTVDGEKNV---GLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWA---RHYEAILARRKLRAQ----SFEDWVLSFTDMAAHDWCTEYISE-----KGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDV 635          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 2.000e-41
Identity = 95/266 (35.71%), Postives = 145/266 (54.51%), Query Frame = 1
Query:  703 PVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGG----HSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGRV-VPTASFWQMDVRVEDAKDIAIAKGML 1485
            P    DPHMTG  GQ+FD++GEDGG+YA +S    + MN+RVTS +P + PE   +TG++++T       HSIV++V +P D+E  C A   P    CL +G LRV ++G+EE+   G      G+ +TAVNLP EC+ FG    W     E+K +   R+ R  G   S+ DWLL D        C++Y+ +  G    L  +QS HA  +I +P  ++R++ G   +        R  +P  + WQM++ ++  +    A G+L
Sbjct:   85 PRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVP-SLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACPAGVSP----CLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYW-----ERKKLENARHGRHLGE-QSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGIL 339          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.600e-41
Identity = 92/250 (36.80%), Postives = 142/250 (56.80%), Query Frame = 1
Query:  709 IFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQD-ELQMNLRVTSHLPKTFPERQLVTGVAVVTEGGHSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLA-DSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQ-DGRVVPTASFWQMDVRVE 1449
            I+ DPHM GL GQR +WSG DGGWY+ +   + +L +N+RVT+ LP  FP+RQL+T +A+++EG +S+V++V +P     T       + +PC  NGGLR+ VDG                H     L    Q  G   +W  + ++  ++   R LR      S+ +W+L  D  M A  WC KY+ E +     LAD+Q+NHA+ +I++P +++R+N G+N +    L  DGRV+P   FWQ+DV ++
Sbjct:   17 IWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVKNPYT---TDTGGCPEDVSPCHANGGLRIIVDG----------------HEVDELLRFSRQMPGGKRIWARMYQD--ILEGRRQLRGG---ESLEEWILRYDQNMPARTWCAKYIAEND-----LADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGID 236          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 5.220e-34
Identity = 89/271 (32.84%), Postives = 138/271 (50.92%), Query Frame = 1
Query:  700 NPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGG----HSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHT---GRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEE--LNGDVTALADIQSNHAVLRIESPNLSLRVNVGINSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485
            +P    DPHMTG  GQ+FD++G+DG WY  +S    + +N+RVT+ +P   P+   +TG++++T+ G    HS+V+ V DP  LE +C A       PCL NG L V++DG+E +   G       + ++ VNLP  C+ FG    W    E +KL +    GR L S      + DW+L D        C +Y+    + G    L   +S HA  +I  P  ++R++ G      Q  Q G  +P  S WQM++ ++       A+G+L
Sbjct:   51 DPTACGDPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSR-PDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCPAGV----TPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYW----ERKKLEYAQAGGRRLSSKDQ--DMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHG---RLHQIAQYG--LPDHSTWQMNLAIDSDSVGVGAQGVL 305          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.750e-32
Identity = 87/273 (31.87%), Postives = 140/273 (51.28%), Query Frame = 1
Query:  682 FNNGFCNPVIFDDPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGG----HSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVG-INSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485
            F +   + VI  DPHMTG  GQ+FD++GEDGGWY+ ++  + + +N+RVTS +    PE   +TG++V+T       HSIV++V+DP +L+ +C A   P    CL +G L V +DG E +   G       + ++A NLP  C+ FG    W     E+K +   R  R   T  S+ +W+L D        CV+Y+     +   +   QS H   +I +P  ++R++ G ++    +   D   +P    WQM++ +        AKG+L
Sbjct:  307 FGDESVDGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN-MNVNMRVTSPVAD-LPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCPAGVSP----CLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYW-----ERKKLENARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGIL 568          
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 5.160e-31
Identity = 91/282 (32.27%), Postives = 142/282 (50.35%), Query Frame = 1
Query:  703 PVIFD---DPHMTGLRGQRFDWSGEDGGWYAFLSTQDELQMNLRVTSH---LPKTFPERQLVTGVAVVTE------------GGHSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEFHFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHT--GRNLRSTGTVTSIFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSLRVNVG-INSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML 1485
            P +F     PHMTG  GQ+FD++GEDGGWY+ ++  + + +N+RVTS     P++   ++L    + V E              HSIV++V +P  L+ +C A   P    CL +G LRV +DG E +   G      G+ I+AVNLP  C+ FG    W    E +KL +   GR LR   T  S+ +W+L D        CV+Y+     +   +   QS HA  +I +P  ++R++ G ++    +   D   +P    WQM++ V+  +    AKG+L
Sbjct:    2 PPVFSLSGGPHMTGFLGQKFDFTGEDGGWYSIIADSN-MNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCPAGVSP----CLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYW----EHKKLEYATGGRQLR---TQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGIL 271          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10657.1424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G544_ECTSI4.910e-24267.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMW2_ECTSI1.280e-5240.38Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JS96_9PHAE1.690e-5038.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD0_9PHAE1.200e-4738.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNZ2_9PHAE2.200e-4741.34VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JW46_9PHAE2.000e-4135.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP37_9PHAE3.600e-4136.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRS2_9PHAE5.220e-3432.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF3_9PHAE1.750e-3231.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Y7_9PHAE5.160e-3132.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10657contigM-pyrifera_M_contig10657:708..3637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons3
Model size1485
Cds size1485
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10657.1424.1prot_M-pyrifera_M_contig10657.1424.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10657 708..3637 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815575.8846068-CDS-M-pyrifera_M_contig10657:707..19851622815575.8846068-CDS-M-pyrifera_M_contig10657:707..1985Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10657 708..1985 -
1692277470.9644191-CDS-M-pyrifera_M_contig10657:707..19851692277470.9644191-CDS-M-pyrifera_M_contig10657:707..1985Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10657 708..1985 -
1622815575.8958097-CDS-M-pyrifera_M_contig10657:2725..28221622815575.8958097-CDS-M-pyrifera_M_contig10657:2725..2822Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10657 2726..2822 -
1692277470.9736676-CDS-M-pyrifera_M_contig10657:2725..28221692277470.9736676-CDS-M-pyrifera_M_contig10657:2725..2822Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10657 2726..2822 -
1622815575.9116318-CDS-M-pyrifera_M_contig10657:3527..36371622815575.9116318-CDS-M-pyrifera_M_contig10657:3527..3637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10657 3528..3637 -
1692277470.9841483-CDS-M-pyrifera_M_contig10657:3527..36371692277470.9841483-CDS-M-pyrifera_M_contig10657:3527..3637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10657 3528..3637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10657.1424.1

>prot_M-pyrifera_M_contig10657.1424.1 ID=prot_M-pyrifera_M_contig10657.1424.1|Name=mRNA_M-pyrifera_M_contig10657.1424.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=495bp
MLVQGTMRGFTPFLLLLAATVGYTTGHVVSAHHHDGSRALSAVQEVSDVD
VFYRRLDPEEGQCCGMCTQLILNPLVVVLLVSNGVTSAGDLNPVVLELAG
ITPVTIIIRITLIYTDNKASDPSQRLSLVFDSVVEPGDWNDTLCSYLEED
CVVFQSDGILMFAPDAPGGFATLSLDALTQFTADSDINIVSNTCDVRCQN
PGECSTLDTSLEPSGGGILFGTPVQSTFNNGFCNPVIFDDPHMTGLRGQR
FDWSGEDGGWYAFLSTQDELQMNLRVTSHLPKTFPERQLVTGVAVVTEGG
HSIVVDVVDPLDLEPTCAASAGPNSAPCLVNGGLRVTVDGREEMQGAGEF
HFDGGIHITAVNLPLECQRFGDHLMWGDLNEEQKLMHTGRNLRSTGTVTS
IFDWLLADSVMIAPPWCVKYLEELNGDVTALADIQSNHAVLRIESPNLSL
RVNVGINSEQEQTLQDGRVVPTASFWQMDVRVEDAKDIAIAKGML
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mRNA from alignment at M-pyrifera_M_contig10657:708..3637-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10657.1424.1 ID=mRNA_M-pyrifera_M_contig10657.1424.1|Name=mRNA_M-pyrifera_M_contig10657.1424.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2930bp|location=Sequence derived from alignment at M-pyrifera_M_contig10657:708..3637- (Macrocystis pyrifera P11B4 male)
ATGCTCGTGCAGGGCACGATGAGAGGCTTCACGCCGTTCTTGCTTCTGCT TGCGGCGACGGTGGGCTACACCACAGGCCATGTCGTCAGCGCACACCACC ACGATGGAAGGTGATGCCGAACGGTCGCATTGTTGTCTGGTACGCACGCA CATGCCACTAGTAGTAAACGTTCACCTATCTACTCGTACACGTATGTACA CCCTACCAGTACCGGTACGAAACTATTGGACGATCCCTCCACTCAGTTGA AGCGCGTATGGCAAAAAGGTGGGAGTTAACTCGCACCCTGTCGTCATTTC AAGTTATTGCGCAAGAGATGACACCATAAGCCACCCAGCCAACAGTCTGT CAACGACGTACTCAGCAGGCAGAGCATCAATGAAGATGGTGTACTGCATG TGGTCGCCGCGTGTCAAGCATTCTGTGCGTATTTCCCCTGCAATACCCTC TATCCTGTCCATCGCCCCGAGCGAGTTGCTCTCCGGTGCTAGCTGAAAAC TATTAAGTCATCGGGAGAGGTCGGATTTGGCCCCGGCCGTTTGATGGCCG TACCACGAAAAAGAGGCGTCCCACGGTTCCCTGTCCTGTGTATACGAACA AACGCAGCCGCCGCAAACGAACCGACAACTCTTCAAAACTAAAAGGGATT TACACTATGTCAGCTCTTACTGTTGTGGGCGTATGGCGATAGTAGTCCAT TTTATCCACTACCGGAAAGAAACATCCTCCTTCTTGGCAGTTGTGTCACG ATCTGACGATGTATTCGACGCTTCCACGCTTTGCACACATTGGTGTCGTC GTTGATCTATCTCAGCCGCGCCCTTTCTGCAGTGCAAGAGGTCAGCGACG TGGATGTCTTTTATCGTCGGCTAGACCCTGAGGAAGGGCAGTGCTGCGGC ATGTGTACGCAGGTATGATACGGCTACCGTAGTTATGTTCAATCTCCTCG TTTTAAAAGACGCAGTGCGTGTCATGATGAATGTAAGCGTTGCGTGCGTG TGGAATCTTGTGCGGGGTGGCGGAGAGTTTCAAACGCCTACAGAGCTAGC GTCAGGGGCTTACACTATTCAAGGCATAAGTGCTATGGCAAATTCTGTCG TGATGCAACCTCCAGGGTAGATTACAACAACGCGAGATCTTCTGATAATG CCGAGGCTCTCCCCCCCCCCCCCACCAACGTGACACCTTGCATACGAAGA TCTTCGATGGAGATGCAGCCCAACACCCAGTCGATGCGTGAGGTCCATAT TTCGGCACCCCGAGTGCCGAAAGTCTACCACGTATCATGTTCAGAACCAC GTGGAAGACGATACTATATACTATAAATTGCAGCCGACACACGAAAGCCT CGCCGGTGCATCGTCATACTCTTAGCACCTTATGTAATTGGTCGCAGCAC GTAGCAGTATCTCTCTTGATGGTATACGATGCGTCAAACATGCCAGCTAG AACGATTTTCCCGTATGGCTGAACTACCCGTGATCACCCCATTCCTACGA TAAAATCGGATGTTGGTATATTTTTGAATGAAACATCGCTGATATACAGT AACATCTGGATCTTTTGTCAGACAAACCTGACAAAGCCCAATGAACTCTC GCTCGCACCCTTGCATCCCTTGCCCAATTTCAATCCTTGTGCCCACCTGC AGCTTATTCTAAACCCGTTGGTGGTGGTGCTTCTCGTGTCGAACGGCGTC ACGAGCGCCGGCGACCTCAACCCTGTTGTTTTGGAATTGGCTGGCATCAC CCCCGTCACCATTATCATCCGCATCACCTTGATCTACACGGACAACAAGG CCTCTGACCCGTCCCAGCGACTGTCGCTTGTGTTCGACTCGGTCGTCGAG CCCGGAGACTGGAACGACACGCTCTGCAGCTATCTCGAGGAAGACTGCGT CGTGTTTCAGAGCGACGGAATCCTCATGTTCGCTCCGGATGCCCCGGGCG GGTTCGCCACTCTCAGTCTCGACGCTCTGACTCAATTCACGGCCGATTCC GATATCAATATTGTAAGCAACACCTGCGATGTTCGCTGCCAAAACCCGGG CGAGTGCAGCACTTTAGATACCTCTCTCGAACCATCTGGCGGCGGAATTC TTTTTGGAACCCCTGTCCAATCCACCTTCAACAACGGCTTCTGCAACCCT GTCATATTCGATGACCCGCACATGACTGGCCTTCGCGGCCAGCGGTTCGA CTGGTCCGGCGAGGATGGCGGCTGGTACGCCTTCCTGTCGACTCAAGACG AACTGCAGATGAACCTTCGCGTCACCTCCCACCTGCCAAAGACGTTTCCT GAACGCCAACTTGTGACCGGCGTTGCAGTGGTCACCGAAGGCGGTCATTC GATTGTGGTGGACGTCGTGGACCCCCTCGACCTCGAACCCACTTGCGCCG CCAGTGCTGGGCCTAACTCGGCACCTTGCCTGGTTAATGGTGGCCTCCGT GTAACTGTTGATGGGCGCGAGGAGATGCAAGGCGCTGGTGAGTTTCACTT CGACGGCGGAATCCACATCACCGCCGTGAACCTGCCCCTCGAGTGCCAGC GATTCGGCGACCACCTCATGTGGGGGGACCTCAACGAGGAGCAGAAGCTC ATGCACACGGGGCGGAATCTGCGGTCCACTGGCACGGTCACCTCCATCTT CGACTGGCTCCTGGCAGACTCCGTGATGATCGCCCCGCCGTGGTGCGTGA AGTACCTCGAGGAGCTCAACGGCGATGTGACCGCCCTAGCCGACATCCAG TCTAACCACGCCGTGCTACGGATCGAGTCGCCCAACCTGTCGCTGCGTGT GAACGTGGGCATCAACAGCGAGCAGGAACAGACCCTACAGGATGGCCGGG TCGTGCCCACTGCTTCATTCTGGCAGATGGACGTGCGCGTCGAGGATGCC AAGGACATTGCGATCGCAAAGGGAATGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10657:708..3637-

>mRNA_M-pyrifera_M_contig10657.1424.1 ID=mRNA_M-pyrifera_M_contig10657.1424.1|Name=mRNA_M-pyrifera_M_contig10657.1424.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2970bp|location=Sequence derived from alignment at M-pyrifera_M_contig10657:708..3637- (Macrocystis pyrifera P11B4 male)
ATGCTCGTGCAGGGCACGATGAGAGGCTTCACGCCGTTCTTGCTTCTGCT
TGCGGCGACGGTGGGCTACACCACAGGCCATGTCGTCAGCGCACACCACC
ACGATGGAAGATGCTCGTGCAGGGCACGATGAGAGGCTTCACGCCGTTCT
TGCTTCTGCTTGCGGCGACGGTGGGCTACACCACAGGCCATGTCGTCAGC
GCACACCACCACGATGGAAGCCGCGCCCTTTCTGCAGTGCAAGAGGTCAG
CGACGTGGATGTCTTTTATCGTCGGCTAGACCCTGAGGAAGGGCAGTGCT
GCGGCATGTGTACGCAGCCGCGCCCTTTCTGCAGTGCAAGAGGTCAGCGA
CGTGGATGTCTTTTATCGTCGGCTAGACCCTGAGGAAGGGCAGTGCTGCG
GCATGTGTACGCAGCTTATTCTAAACCCGTTGGTGGTGGTGCTTCTCGTG
TCGAACGGCGTCACGAGCGCCGGCGACCTCAACCCTGTTGTTTTGGAATT
GGCTGGCATCACCCCCGTCACCATTATCATCCGCATCACCTTGATCTACA
CGGACAACAAGGCCTCTGACCCGTCCCAGCGACTGTCGCTTGTGTTCGAC
TCGGTCGTCGAGCCCGGAGACTGGAACGACACGCTCTGCAGCTATCTCGA
GGAAGACTGCGTCGTGTTTCAGAGCGACGGAATCCTCATGTTCGCTCCGG
ATGCCCCGGGCGGGTTCGCCACTCTCAGTCTCGACGCTCTGACTCAATTC
ACGGCCGATTCCGATATCAATATTGTAAGCAACACCTGCGATGTTCGCTG
CCAAAACCCGGGCGAGTGCAGCACTTTAGATACCTCTCTCGAACCATCTG
GCGGCGGAATTCTTTTTGGAACCCCTGTCCAATCCACCTTCAACAACGGC
TTCTGCAACCCTGTCATATTCGATGACCCGCACATGACTGGCCTTCGCGG
CCAGCGGTTCGACTGGTCCGGCGAGGATGGCGGCTGGTACGCCTTCCTGT
CGACTCAAGACGAACTGCAGATGAACCTTCGCGTCACCTCCCACCTGCCA
AAGACGTTTCCTGAACGCCAACTTGTGACCGGCGTTGCAGTGGTCACCGA
AGGCGGTCATTCGATTGTGGTGGACGTCGTGGACCCCCTCGACCTCGAAC
CCACTTGCGCCGCCAGTGCTGGGCCTAACTCGGCACCTTGCCTGGTTAAT
GGTGGCCTCCGTGTAACTGTTGATGGGCGCGAGGAGATGCAAGGCGCTGG
TGAGTTTCACTTCGACGGCGGAATCCACATCACCGCCGTGAACCTGCCCC
TCGAGTGCCAGCGATTCGGCGACCACCTCATGTGGGGGGACCTCAACGAG
GAGCAGAAGCTCATGCACACGGGGCGGAATCTGCGGTCCACTGGCACGGT
CACCTCCATCTTCGACTGGCTCCTGGCAGACTCCGTGATGATCGCCCCGC
CGTGGTGCGTGAAGTACCTCGAGGAGCTCAACGGCGATGTGACCGCCCTA
GCCGACATCCAGTCTAACCACGCCGTGCTACGGATCGAGTCGCCCAACCT
GTCGCTGCGTGTGAACGTGGGCATCAACAGCGAGCAGGAACAGACCCTAC
AGGATGGCCGGGTCGTGCCCACTGCTTCATTCTGGCAGATGGACGTGCGC
GTCGAGGATGCCAAGGACATTGCGATCGCAAAGGGAATGCTGCTTATTCT
AAACCCGTTGGTGGTGGTGCTTCTCGTGTCGAACGGCGTCACGAGCGCCG
GCGACCTCAACCCTGTTGTTTTGGAATTGGCTGGCATCACCCCCGTCACC
ATTATCATCCGCATCACCTTGATCTACACGGACAACAAGGCCTCTGACCC
GTCCCAGCGACTGTCGCTTGTGTTCGACTCGGTCGTCGAGCCCGGAGACT
GGAACGACACGCTCTGCAGCTATCTCGAGGAAGACTGCGTCGTGTTTCAG
AGCGACGGAATCCTCATGTTCGCTCCGGATGCCCCGGGCGGGTTCGCCAC
TCTCAGTCTCGACGCTCTGACTCAATTCACGGCCGATTCCGATATCAATA
TTGTAAGCAACACCTGCGATGTTCGCTGCCAAAACCCGGGCGAGTGCAGC
ACTTTAGATACCTCTCTCGAACCATCTGGCGGCGGAATTCTTTTTGGAAC
CCCTGTCCAATCCACCTTCAACAACGGCTTCTGCAACCCTGTCATATTCG
ATGACCCGCACATGACTGGCCTTCGCGGCCAGCGGTTCGACTGGTCCGGC
GAGGATGGCGGCTGGTACGCCTTCCTGTCGACTCAAGACGAACTGCAGAT
GAACCTTCGCGTCACCTCCCACCTGCCAAAGACGTTTCCTGAACGCCAAC
TTGTGACCGGCGTTGCAGTGGTCACCGAAGGCGGTCATTCGATTGTGGTG
GACGTCGTGGACCCCCTCGACCTCGAACCCACTTGCGCCGCCAGTGCTGG
GCCTAACTCGGCACCTTGCCTGGTTAATGGTGGCCTCCGTGTAACTGTTG
ATGGGCGCGAGGAGATGCAAGGCGCTGGTGAGTTTCACTTCGACGGCGGA
ATCCACATCACCGCCGTGAACCTGCCCCTCGAGTGCCAGCGATTCGGCGA
CCACCTCATGTGGGGGGACCTCAACGAGGAGCAGAAGCTCATGCACACGG
GGCGGAATCTGCGGTCCACTGGCACGGTCACCTCCATCTTCGACTGGCTC
CTGGCAGACTCCGTGATGATCGCCCCGCCGTGGTGCGTGAAGTACCTCGA
GGAGCTCAACGGCGATGTGACCGCCCTAGCCGACATCCAGTCTAACCACG
CCGTGCTACGGATCGAGTCGCCCAACCTGTCGCTGCGTGTGAACGTGGGC
ATCAACAGCGAGCAGGAACAGACCCTACAGGATGGCCGGGTCGTGCCCAC
TGCTTCATTCTGGCAGATGGACGTGCGCGTCGAGGATGCCAAGGACATTG
CGATCGCAAAGGGAATGCTG
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