mRNA_M-pyrifera_M_contig10656.1422.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: D7G7C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI) HSP 1 Score: 137 bits (345), Expect = 1.100e-35 Identity = 63/90 (70.00%), Postives = 75/90 (83.33%), Query Frame = 1 Query: 1 LQLVSQCGHKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 +QLV G KWSVIA+++KA GK +RVGKQIRERYLHHLDPNL+KG W++EE EE LV +H +++NKWAQIAKSLPGRC NDIKNHW Sbjct: 435 IQLVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEE---EEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHW 521
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A0A2G2VXH5_CAPBA (Transcriptional activator Myb n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VXH5_CAPBA) HSP 1 Score: 95.5 bits (236), Expect = 2.170e-22 Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 1 LQLVSQCGH-KWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 ++LV++ G KWSVIA + R+GKQ RER+ +HL+PN++K WTLEE R+ L+ H+++ NKWA+IAK LPGR DN IKNHW Sbjct: 123 IELVAKYGPIKWSVIAKSLPG------RIGKQCRERWHNHLNPNIKKDAWTLEEERA---LIDAHRIHGNKWAEIAKVLPGRADNGIKNHW 204
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A0A835D3V3_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835D3V3_9MAGN) HSP 1 Score: 98.6 bits (244), Expect = 4.640e-22 Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 1 LQLVSQCG-HKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 ++LV +CG KWSV+A + R+GKQ RER+++HL+P ++K WT EE E TL+ HK+Y NKW +IAK LPGR DN IKNHW Sbjct: 117 IELVEKCGCKKWSVVANSLPG------RIGKQCRERWINHLNPAIKKDAWTKEE---ELTLIHAHKIYGNKWTEIAKFLPGRADNSIKNHW 198
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: D8RS06_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RS06_SELML) HSP 1 Score: 92.4 bits (228), Expect = 5.420e-22 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 LQLVSQCG-HKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 ++LV Q G +WS+I+T M +R GKQ RER+++HL P++RK GWT EE EE LV H + NKW+ IAK LPGR DN IKNHW Sbjct: 21 VKLVKQYGTRRWSLISTFMA------NRSGKQCRERWVNHLQPDIRKEGWTKEE---EELLVQAHSYFGNKWSAIAKMLPGRTDNSIKNHW 102
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A9TCW1_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TCW1_PHYPA) HSP 1 Score: 90.9 bits (224), Expect = 8.080e-22 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 4 QLVSQCG-HKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 +LV Q G +WS+I+T M +R GKQ RER+++HL P++RK GWT EE EE LV H + N+W+ IAK LPGR DN IKNHW Sbjct: 15 KLVKQYGSRRWSLISTFMA------NRSGKQCRERWVNHLHPDIRKEGWTTEE---EELLVHAHSTFGNRWSAIAKMLPGRTDNSIKNHW 95
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A0A1E7EVM5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM5_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.120e-21 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 16 QCGHKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 Q G KW+ IA + R GKQ RER+++HLDP L+KG WT +E E L+ H+++ N+WA I+K LPGR DND+KNHW Sbjct: 49 QYGRKWAKIAAHLPG------RQGKQCRERFVNHLDPELKKGEWTDDE---EAILIAMHELHGNRWANISKQLPGRSDNDVKNHW 124
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A0A0A9H4S3_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9H4S3_ARUDO) HSP 1 Score: 92.4 bits (228), Expect = 1.430e-21 Identity = 46/81 (56.79%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 28 KWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 KWSVIA + R+GKQ RER+ +HLDP +RK WT+EE E LV H VY N WA+IAK LPGR DN IKNHW Sbjct: 60 KWSVIARSL------DGRIGKQCRERWHNHLDPQIRKEAWTVEE---ERVLVDVHGVYGNNWAEIAKLLPGRTDNSIKNHW 131
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A0A1D1XHT2_9ARAE (Myb-related protein 3R-1 n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XHT2_9ARAE) HSP 1 Score: 96.3 bits (238), Expect = 3.040e-21 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 1 LQLVSQCG-HKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 ++LV++ G KW+VIA++M R+GKQ RER+ +HL+P + KG WT EE E TL+ H+ Y NKWA+IAK LPGR DN IKNHW Sbjct: 136 IELVNKYGAKKWAVIASKMPG------RIGKQCRERWHNHLNPAINKGAWTTEE---EITLIRAHQTYGNKWAEIAKFLPGRADNSIKNHW 217
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A0A8N4F9T4_ELAGV (transcription factor MYB3R-5 isoform X7 n=2 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A8N4F9T4_ELAGV) HSP 1 Score: 92.8 bits (229), Expect = 3.790e-21 Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 1 LQLVSQCG-HKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 ++LV++ G KWSVIA + R+GKQ RER+ +HL+P+++K WT EE E TL+ H++Y NKWA+IAK LPGR DN IKNHW Sbjct: 115 IKLVAKHGCKKWSVIAKSLPG------RIGKQCRERWHNHLNPSIKKDAWTPEE---EVTLIHAHQIYGNKWAEIAKLLPGRTDNSIKNHW 196
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Match: A0A6I9R6K9_ELAGV (transcription factor MYB3R-2 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9R6K9_ELAGV) HSP 1 Score: 95.9 bits (237), Expect = 3.860e-21 Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 1 LQLVSQCGHK-WSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTLEEARSEETLVTQHKVYQNKWAQIAKSLPGRCDNDIKNHW 270 +QLV + G+K WSVIA + R+GKQ RER+ +HL+P ++K WT EE EE LV H++Y NKWA+IAK LPGR DN IKNHW Sbjct: 110 IQLVEKHGYKRWSVIAKSLPG------RIGKQCRERWHNHLNPAIKKDAWTREE---EEVLVRAHQIYGNKWAEIAKYLPGRTDNSIKNHW 191 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10656.1422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10656.1422.1 >prot_M-pyrifera_M_contig10656.1422.1 ID=prot_M-pyrifera_M_contig10656.1422.1|Name=mRNA_M-pyrifera_M_contig10656.1422.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp LQLVSQCGHKWSVIATRMKAACGKQSRVGKQIRERYLHHLDPNLRKGGWTback to top mRNA from alignment at M-pyrifera_M_contig10656:722..1791+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10656.1422.1 ID=mRNA_M-pyrifera_M_contig10656.1422.1|Name=mRNA_M-pyrifera_M_contig10656.1422.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1070bp|location=Sequence derived from alignment at M-pyrifera_M_contig10656:722..1791+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10656:722..1791+ >mRNA_M-pyrifera_M_contig10656.1422.1 ID=mRNA_M-pyrifera_M_contig10656.1422.1|Name=mRNA_M-pyrifera_M_contig10656.1422.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig10656:722..1791+ (Macrocystis pyrifera P11B4 male)back to top |