mRNA_M-pyrifera_M_contig10651.1401.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: D7FPR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR7_ECTSI) HSP 1 Score: 156 bits (395), Expect = 6.890e-44 Identity = 101/151 (66.89%), Postives = 113/151 (74.83%), Query Frame = 1 Query: 1 LMADEYKTVLTGGLSLKGGLFKSKKXXXXXXXXDEAEAVVRAQEAANADDLSSGSAAEDVDPRSSGPD------GVEDRNDPKAEEASENIDDMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 +M+DEY VLTGGLSLKGGLFKSKKXXXXXXXX EAA D+ SSGSAA+ D SG D G + N E+A E +DDMLTPAQRRFR++QL REGKKIR MVE+THRER+E+FNALLASMTEHNDIPRCSAAGNG Sbjct: 31 IMSDEYSAVLTGGLSLKGGLFKSKKXXXXXXXXXXXXXXXXXXEAAIEDERSSGSAADGADAGGSGSDDGAKKEGAGEGN----EQAGEEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 177
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: A0A835YYZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ7_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.110e-18 Identity = 63/149 (42.28%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 4 MADEYKTVLTGGLSLKG-GLFK--SKKXXXXXXXXDE--AEAVVRAQEAANADDLSSGSAAEDVDPRSSGPDGVEDRNDPKAEEASENIDDMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 MAD+Y +V G LSLK GLF + K E +E R+ A + D G+AA V S ++D LTPAQ+RF+E QL+RE + +R +V+KTHR+RVE+FN +A +TEHNDIPR SAAGNG Sbjct: 1 MADDYSSVQRGKLSLKADGLFGGGANKGGGNKKRAREGASEEPARSNSAKGSADSVRGAAAPSV-------------------SGSSDVDSGLTPAQKRFKEAQLARERQVMRELVKKTHRQRVEEFNQKIAKLTEHNDIPRISAAGNG 130
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: A0A836CFW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.060e-16 Identity = 36/60 (60.00%), Postives = 54/60 (90.00%), Query Frame = 1 Query: 256 DDMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 D+ LTPAQ+R+++++ S++ K+I+++V+ THR+R+E+FN+ LASMTEHNDIPR SAAGNG Sbjct: 71 DEFLTPAQKRYKQQKASQDEKRIKAIVKMTHRDRIEEFNSTLASMTEHNDIPRISAAGNG 130
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: A0A7S2H078_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H078_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 4.210e-13 Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 208 VEDRNDPKAEEASENIDDMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 +E+R + E ++N++ +LT AQ+R+R +RE + R V KTHRE+VEDFN +L +TEHNDIPR SAAGNG Sbjct: 41 LENRKQSEEPEENDNVE-VLTAAQKRYRATMKAREQEHARVAVRKTHREKVEDFNYMLGELTEHNDIPRVSAAGNG 115
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: A0A482S2J5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2J5_9ARCH) HSP 1 Score: 70.9 bits (172), Expect = 8.420e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 232 AEEASENIDDMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 A+ S+ D LT AQRRF+ RQ +E KKI+ K+ R+RVE+FN L+ +TEHNDIPR SAAGNG Sbjct: 50 ADTDSKPSDAHLTEAQRRFKRRQQEKEEKKIKVEASKSFRDRVEEFNYKLSKLTEHNDIPRVSAAGNG 117
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: A0A421F7G8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F7G8_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.420e-12 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 265 LTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 LTPAQRR E Q RE ++I + KT+RER+ED N L S+TEH+D+PR SAAGNG Sbjct: 61 LTPAQRRHAEHQKKREQEEIEKVASKTYRERIEDLNQYLGSLTEHHDVPRVSAAGNG 117
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: H3HAY7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAY7_PHYRM) HSP 1 Score: 70.5 bits (171), Expect = 1.640e-11 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 259 DMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 D LTPAQRR E Q RE ++I + KT+RER+E+ N L S+TEH+D+PR SAAGNG Sbjct: 73 DDLTPAQRRHAEHQKKREQEEIEKVASKTYRERIEELNQYLGSLTEHHDVPRVSAAGNG 131
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: A0A0P1A8L4_PLAHL (Conserved alpha-helical protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8L4_PLAHL) HSP 1 Score: 69.7 bits (169), Expect = 1.980e-11 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 253 IDDMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 +DDM TPAQRR E + RE ++I M KT+RER+E+ N L S+TEH+D+PR SAAGNG Sbjct: 53 VDDM-TPAQRRHAEHKKKREQEEIEKMASKTYRERIEELNQHLGSLTEHHDVPRVSAAGNG 112
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: K3WJS6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJS6_GLOUD) HSP 1 Score: 69.7 bits (169), Expect = 2.660e-11 Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 196 GPDGVEDRNDPKAEEASENIDDMLTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 G DG E + E+ E + + +TPAQRR E + RE +I M KT+RERVE+ N L S+TEH+D+PR SAAGNG Sbjct: 45 GADGEEVEREQSREDDVEILMNDMTPAQRRHEEHRRKREQAEIEKMAGKTYRERVEELNQYLGSLTEHHDVPRVSAAGNG 124
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Match: A0A3M6VP18_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP18_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.890e-11 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 265 LTPAQRRFRERQLSREGKKIRSMVEKTHRERVEDFNALLASMTEHNDIPRCSAAGNG 435 +TPAQRR E Q RE ++I+ + KT+RER+E+ N L S+TEH+D+PR SAAGNG Sbjct: 57 MTPAQRRHAEHQKKREQEEIKKLASKTYRERIEELNQHLGSLTEHHDVPRVSAAGNG 113 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10651.1401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10651.1401.1 >prot_M-pyrifera_M_contig10651.1401.1 ID=prot_M-pyrifera_M_contig10651.1401.1|Name=mRNA_M-pyrifera_M_contig10651.1401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp MADEYKTVLTGGLSLKGGLFKSKKKKKAKRKRDEAEAVVRAQEAANADDLback to top mRNA from alignment at M-pyrifera_M_contig10651:1020..5614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10651.1401.1 ID=mRNA_M-pyrifera_M_contig10651.1401.1|Name=mRNA_M-pyrifera_M_contig10651.1401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4595bp|location=Sequence derived from alignment at M-pyrifera_M_contig10651:1020..5614+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10651:1020..5614+ >mRNA_M-pyrifera_M_contig10651.1401.1 ID=mRNA_M-pyrifera_M_contig10651.1401.1|Name=mRNA_M-pyrifera_M_contig10651.1401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig10651:1020..5614+ (Macrocystis pyrifera P11B4 male)back to top |