mRNA_M-pyrifera_M_contig105943.1273.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105943.1273.1
Unique NamemRNA_M-pyrifera_M_contig105943.1273.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: UPI001594D7B9 (glycine--tRNA ligase subunit beta n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001594D7B9)

HSP 1 Score: 419 bits (1076), Expect = 2.720e-140
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQ+GGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  235 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQDGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 444
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BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: A0A2M7LHD1_9SPHN (Glycine--tRNA ligase beta subunit n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LHD1_9SPHN)

HSP 1 Score: 385 bits (988), Expect = 7.450e-126
Identity = 199/240 (82.92%), Postives = 204/240 (85.00%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNGGG------------------------------APPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            +LVEDEGLVIENAGLTEWPVPLLG+FDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQ+G G                               PPSAVPAATSPSL DREEKLAPYFVCTANI ASDGGKAI+AGNEKVLAARLSDAKFFWELDQKT LEDHAKKL NIVFHEKLGTVADKVERVA+LAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  264 DLVEDEGLVIENAGLTEWPVPLLGSFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQHGEGDRAQRGGHGFASEPGSVGQAAPGSLLRPTTPPPSAVPAATSPSLGDREEKLAPYFVCTANIAASDGGKAIIAGNEKVLAARLSDAKFFWELDQKTKLEDHAKKLGNIVFHEKLGTVADKVERVARLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 503
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: A0A653JFB8_9SPHN (Glycine--tRNA ligase beta subunit n=1 Tax=Sphingorhabdus sp. 109 TaxID=2653173 RepID=A0A653JFB8_9SPHN)

HSP 1 Score: 373 bits (958), Expect = 5.160e-122
Identity = 192/223 (86.10%), Postives = 197/223 (88.34%), Query Frame = 1 
Query:    4 LVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNG---------GGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQT-----KQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            LVEDEGLV+ENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQ+G         G  PPSAVPAATSPSLRDREEKLAP FVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKT LEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWL SLEG G  + +P  T      +AARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  266 LVEDEGLVVENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQHGEADRAQRGGGATPPSAVPAATSPSLRDREEKLAPNFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTRLEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLVSLEGNGFYQPSPGDTFHGEVSEAARLCKADLVTEMVGEFPELQGLMGGYYAE 488
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: A0A127MEE2_9SPHN (Glycine--tRNA ligase beta subunit n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MEE2_9SPHN)

HSP 1 Score: 357 bits (915), Expect = 7.670e-116
Identity = 182/210 (86.67%), Postives = 188/210 (89.52%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            +LVEDEGLVIENAGLTEWPVPLLG+FDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQ+G                   E+KLAP FVCTANI ASDGGKAI+AGNEKVLAARLSDAKFFWELDQKT LEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRA+PEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  235 DLVEDEGLVIENAGLTEWPVPLLGSFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQHG-------------------EDKLAPNFVCTANIAASDGGKAIIAGNEKVLAARLSDAKFFWELDQKTKLEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRADPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 425
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BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: A0A2G2CW51_9SPHN (Glycine--tRNA ligase beta subunit n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2CW51_9SPHN)

HSP 1 Score: 355 bits (910), Expect = 2.120e-114
Identity = 183/211 (86.73%), Postives = 189/211 (89.57%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYP-PNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            +LVEDEGLVIENAGLTEWPVPLLG FDPAFLDVPEEVIQLTARVNQKYF+C+ P P A   GG P  A      PS R RE  LAP FVCTANIDASDGG AI+AGNEKVLAARLSDAKFFW+LDQKT+LEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  265 DLVEDEGLVIENAGLTEWPVPLLGRFDPAFLDVPEEVIQLTARVNQKYFICRTPLPLAGGAGGGPGDAGNPTPDPS-RKREGNLAPNFVCTANIDASDGGAAIIAGNEKVLAARLSDAKFFWDLDQKTSLEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 474
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: A0A1B6Z567_9SPHN (Glycine--tRNA ligase beta subunit n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z567_9SPHN)

HSP 1 Score: 336 bits (862), Expect = 1.320e-107
Identity = 174/210 (82.86%), Postives = 179/210 (85.24%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            ELV+DEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLT RVNQKYF+C                         RD++  LAP FVCTANI ASDGGKAIVAGNEKVLAARLSDAKFFWELDQKT LEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRA+PEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  260 ELVQDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTTRVNQKYFIC-------------------------RDKQGALAPNFVCTANIAASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTRLEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRADPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 444
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: UPI001E551498 (glycine--tRNA ligase subunit beta n=1 Tax=Parasphingorhabdus litoris TaxID=394733 RepID=UPI001E551498)

HSP 1 Score: 329 bits (844), Expect = 3.660e-106
Identity = 172/216 (79.63%), Postives = 183/216 (84.72%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYP-PNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQT-----KQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            ELV DEGLVIENAGLTEWPVPLLG FDPAFLDVPEEVIQLTARVNQKYF+C+ P P A   GG P +A     +PS R RE  LAP F+CTANIDA+DGGKAI AGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWL SLEG G  +++P  T      +AARLCKADLVTEMVGEFP+LQGLMGGYYAE
Sbjct:  235 ELVADEGLVIENAGLTEWPVPLLGGFDPAFLDVPEEVIQLTARVNQKYFICRTPLPLAGGAGGGPETAGHPTPNPS-RKREGNLAPNFICTANIDATDGGKAIAAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLVSLEGNGFDQSSPGDTFHREVSEAARLCKADLVTEMVGEFPDLQGLMGGYYAE 449
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: A0A2D3RI31_9SPHN (Glycine--tRNA ligase beta subunit n=1 Tax=Sphingorhabdus sp. YGSMI21 TaxID=2077182 RepID=A0A2D3RI31_9SPHN)

HSP 1 Score: 326 bits (836), Expect = 1.020e-104
Identity = 170/209 (81.34%), Postives = 176/209 (84.21%), Query Frame = 1 
Query:    4 LVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            LV+D+GLV+ENAGLTEWPVPLLG FD +FLDVPEEVIQLTARVNQKYFV                         L+D + KL   FVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKT LEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  236 LVQDQGLVVENAGLTEWPVPLLGHFDKSFLDVPEEVIQLTARVNQKYFV-------------------------LKDGDGKLTNAFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTRLEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPELQGLMGGYYAE 419
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: A0A6H2DJT2_9SPHN (Glycine--tRNA ligase beta subunit n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DJT2_9SPHN)

HSP 1 Score: 316 bits (810), Expect = 1.900e-101
Identity = 167/220 (75.91%), Postives = 178/220 (80.91%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNGGGAPP-----SAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQT-----KQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            ELVEDEGLVIENAGLTEWPVPLLG+FDPAFLDVPEEVIQLTARVNQKYFVC+Y   A +     P     S +   +S S  + +  L   FVCTANI ASDGGKAIVAGNEKVL ARLSDAKFFWELDQKT LEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWL SLEG G  +++P  T      +AARLCKADLVTEMVGEFPELQGLMGGYYAE
Sbjct:  235 ELVEDEGLVIENAGLTEWPVPLLGSFDPAFLDVPEEVIQLTARVNQKYFVCQYAGEASSAPDNDPERPSSSRLAEESSASSAEHKGGLTSNFVCTANIGASDGGKAIVAGNEKVLTARLSDAKFFWELDQKTPLEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLVSLEGNGFYQSSPGDTFHSEVSEAARLCKADLVTEMVGEFPELQGLMGGYYAE 454
[Close]
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Match: UPI000D696DD6 (glycine--tRNA ligase subunit beta n=1 Tax=Sphingorhabdus sp. EL138 TaxID=2073156 RepID=UPI000D696DD6)

HSP 1 Score: 314 bits (804), Expect = 2.420e-100
Identity = 163/215 (75.81%), Postives = 172/215 (80.00%), Query Frame = 1 
Query:    1 ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFVCKYPPNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVADKVERVAKLAEWLASLEGTGLLRANPEQT-----KQAARLCKADLVTEMVGEFPELQGLMGGYYAE 630
            ELV DEGLV+ENAGLTEWPVPLLG FDPAFLDVPEEVIQLTARVNQKYF+C                         RD+  KLAP F+CTANIDA+DGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHA+KLSNIVFHEKLGTVADKVERVAKLAEWL SLEG G  + NP  T      +AARLCKADLVTEMVGEFP+LQGLMGGYYAE
Sbjct:  235 ELVADEGLVVENAGLTEWPVPLLGGFDPAFLDVPEEVIQLTARVNQKYFIC-------------------------RDKSGKLAPNFICTANIDATDGGKAIVAGNEKVLAARLSDAKFFWELDQKTALEDHARKLSNIVFHEKLGTVADKVERVAKLAEWLVSLEGNGFDQPNPGDTFHGEVSEAARLCKADLVTEMVGEFPDLQGLMGGYYAE 424
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105943.1273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001594D7B92.720e-14099.52glycine--tRNA ligase subunit beta n=1 Tax=Parasphi... [more]
A0A2M7LHD1_9SPHN7.450e-12682.92Glycine--tRNA ligase beta subunit n=1 Tax=Sphingom... [more]
A0A653JFB8_9SPHN5.160e-12286.10Glycine--tRNA ligase beta subunit n=1 Tax=Sphingor... [more]
A0A127MEE2_9SPHN7.670e-11686.67Glycine--tRNA ligase beta subunit n=1 Tax=Sphingor... [more]
A0A2G2CW51_9SPHN2.120e-11486.73Glycine--tRNA ligase beta subunit n=1 Tax=Sphingop... [more]
A0A1B6Z567_9SPHN1.320e-10782.86Glycine--tRNA ligase beta subunit n=1 Tax=Sphingom... [more]
UPI001E5514983.660e-10679.63glycine--tRNA ligase subunit beta n=1 Tax=Parasphi... [more]
A0A2D3RI31_9SPHN1.020e-10481.34Glycine--tRNA ligase beta subunit n=1 Tax=Sphingor... [more]
A0A6H2DJT2_9SPHN1.900e-10175.91Glycine--tRNA ligase beta subunit n=1 Tax=Parasphi... [more]
UPI000D696DD62.420e-10075.81glycine--tRNA ligase subunit beta n=1 Tax=Sphingor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105943contigM-pyrifera_M_contig105943:1..630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score276.6
Seed ortholog evalue9.9e-72
Seed eggNOG ortholog1545915.JROG01000003_gene1657
Preferred nameglyS
KEGG rclassRC00055,RC00523
KEGG koko:K01879,ko:K14164
KEGG ReactionR03654
KEGG Pathwayko00970,map00970
KEGG ModuleM00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Glycyl-tRNA synthetase beta subunit
EggNOG OGs1MV2F@1224,2K16M@204457,2TQKJ@28211,COG0751@1,COG0751@2
EC6.1.1.14
COG Functional cat.J
BiGG ReactioniAPECO1_1312.APECO1_2891,iE2348C_1286.E2348C_3810,iECABU_c1320.ECABU_c40010,iECED1_1282.ECED1_4242,iECH74115_1262.ECH74115_4934,iECNA114_1301.ECNA114_3710,iECOK1_1307.ECOK1_4005,iECP_1309.ECP_3661,iECS88_1305.ECS88_3976,iECSF_1327.ECSF_3393,iECSP_1301.ECSP_4554,iECs_1301.ECs4442,iG2583_1286.G2583_4300,iJN678.glyS,iUMN146_1321.UM146_17960,iUTI89_1310.UTI89_C4099,ic_1306.c4378
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size630
Cds size630
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815568.617017-CDS-M-pyrifera_M_contig105943:0..6301622815568.617017-CDS-M-pyrifera_M_contig105943:0..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105943 1..630 -
1692277467.7767212-CDS-M-pyrifera_M_contig105943:0..6301692277467.7767212-CDS-M-pyrifera_M_contig105943:0..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105943 1..630 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105943.1273.1prot_M-pyrifera_M_contig105943.1273.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105943 1..630 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105943.1273.1

>prot_M-pyrifera_M_contig105943.1273.1 ID=prot_M-pyrifera_M_contig105943.1273.1|Name=mRNA_M-pyrifera_M_contig105943.1273.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
ELVEDEGLVIENAGLTEWPVPLLGAFDPAFLDVPEEVIQLTARVNQKYFV
CKYPPNAQNGGGAPPSAVPAATSPSLRDREEKLAPYFVCTANIDASDGGK
AIVAGNEKVLAARLSDAKFFWELDQKTALEDHAKKLSNIVFHEKLGTVAD
KVERVAKLAEWLASLEGTGLLRANPEQTKQAARLCKADLVTEMVGEFPEL
QGLMGGYYAE
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mRNA from alignment at M-pyrifera_M_contig105943:1..630-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105943.1273.1 ID=mRNA_M-pyrifera_M_contig105943.1273.1|Name=mRNA_M-pyrifera_M_contig105943.1273.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig105943:1..630- (Macrocystis pyrifera P11B4 male)
GAGCTGGTGGAAGACGAAGGCCTGGTGATCGAGAATGCCGGCCTGACCGA
ATGGCCGGTGCCGTTGCTGGGCGCGTTCGATCCCGCGTTTCTCGACGTAC
CGGAAGAGGTGATCCAGCTGACCGCCCGGGTGAACCAGAAATATTTTGTG
TGCAAATATCCTCCCAATGCGCAGAATGGTGGAGGGGCCCCTCCGTCAGC
CGTTCCGGCTGCCACCTCCCCATCGCTTCGCGACAGGGAGGAAAAATTGG
CCCCCTATTTCGTCTGTACGGCGAATATCGACGCCAGCGATGGCGGCAAG
GCAATTGTCGCGGGGAACGAAAAAGTCCTCGCCGCGCGGCTCTCCGACGC
CAAATTCTTCTGGGAACTTGACCAGAAGACGGCATTGGAGGATCATGCAA
AGAAATTGAGCAACATAGTGTTCCACGAGAAACTGGGAACGGTTGCCGAC
AAGGTAGAGCGTGTGGCCAAGCTGGCTGAGTGGTTGGCGTCTTTAGAAGG
GACTGGGTTACTCCGTGCCAACCCGGAACAGACCAAGCAGGCCGCACGTC
TCTGCAAAGCCGATCTCGTCACCGAAATGGTTGGCGAGTTCCCCGAGCTG
CAAGGCTTGATGGGCGGTTATTATGCAGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105943:1..630-

>mRNA_M-pyrifera_M_contig105943.1273.1 ID=mRNA_M-pyrifera_M_contig105943.1273.1|Name=mRNA_M-pyrifera_M_contig105943.1273.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig105943:1..630- (Macrocystis pyrifera P11B4 male)
GAGCTGGTGGAAGACGAAGGCCTGGTGATCGAGAATGCCGGCCTGACCGA
ATGGCCGGTGCCGTTGCTGGGCGCGTTCGATCCCGCGTTTCTCGACGTAC
CGGAAGAGGTGATCCAGCTGACCGCCCGGGTGAACCAGAAATATTTTGTG
TGCAAATATCCTCCCAATGCGCAGAATGGTGGAGGGGCCCCTCCGTCAGC
CGTTCCGGCTGCCACCTCCCCATCGCTTCGCGACAGGGAGGAAAAATTGG
CCCCCTATTTCGTCTGTACGGCGAATATCGACGCCAGCGATGGCGGCAAG
GCAATTGTCGCGGGGAACGAAAAAGTCCTCGCCGCGCGGCTCTCCGACGC
CAAATTCTTCTGGGAACTTGACCAGAAGACGGCATTGGAGGATCATGCAA
AGAAATTGAGCAACATAGTGTTCCACGAGAAACTGGGAACGGTTGCCGAC
AAGGTAGAGCGTGTGGCCAAGCTGGCTGAGTGGTTGGCGTCTTTAGAAGG
GACTGGGTTACTCCGTGCCAACCCGGAACAGACCAAGCAGGCCGCACGTC
TCTGCAAAGCCGATCTCGTCACCGAAATGGTTGGCGAGTTCCCCGAGCTG
CAAGGCTTGATGGGCGGTTATTATGCAGAGGAGCTGGTGGAAGACGAAGG
CCTGGTGATCGAGAATGCCGGCCTGACCGAATGGCCGGTGCCGTTGCTGG
GCGCGTTCGATCCCGCGTTTCTCGACGTACCGGAAGAGGTGATCCAGCTG
ACCGCCCGGGTGAACCAGAAATATTTTGTGTGCAAATATCCTCCCAATGC
GCAGAATGGTGGAGGGGCCCCTCCGTCAGCCGTTCCGGCTGCCACCTCCC
CATCGCTTCGCGACAGGGAGGAAAAATTGGCCCCCTATTTCGTCTGTACG
GCGAATATCGACGCCAGCGATGGCGGCAAGGCAATTGTCGCGGGGAACGA
AAAAGTCCTCGCCGCGCGGCTCTCCGACGCCAAATTCTTCTGGGAACTTG
ACCAGAAGACGGCATTGGAGGATCATGCAAAGAAATTGAGCAACATAGTG
TTCCACGAGAAACTGGGAACGGTTGCCGACAAGGTAGAGCGTGTGGCCAA
GCTGGCTGAGTGGTTGGCGTCTTTAGAAGGGACTGGGTTACTCCGTGCCA
ACCCGGAACAGACCAAGCAGGCCGCACGTCTCTGCAAAGCCGATCTCGTC
ACCGAAATGGTTGGCGAGTTCCCCGAGCTGCAAGGCTTGATGGGCGGTTA
TTATGCAGAG
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