mRNA_M-pyrifera_M_contig105756.1230.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A3D1G7F7_9BACT (TonB_dep_Rec domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G7F7_9BACT) HSP 1 Score: 333 bits (853), Expect = 6.720e-111 Identity = 155/191 (81.15%), Postives = 169/191 (88.48%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 LS AGIGDLRF DVNGDG++NG+DRT IGS IPDFVYGF++ L++K FD+SI FQGQ GNEIFNGKNVVRPDPYNFE HVWDRWTGEGTSN+EPR SYGGYNFLPSDRFIHDGSYLRLRS IIGY LP + TK+ L ARFYLKA NL TFT+Y GYTPEIGS NVL+NGIDTG+YPIPRVISIGFNTTF Sbjct: 263 LSQAGIGDLRFKDVNGDGVINGDDRTYIGSPIPDFVYGFSMDLNWKNFDMSIGFQGQIGNEIFNGKNVVRPDPYNFEAHVWDRWTGEGTSNSEPRPSYGGYNFLPSDRFIHDGSYLRLRSLIIGYRLPEKILTKMNLDNARFYLKANNLFTFTEYPGYTPEIGSNNVLANGIDTGIYPIPRVISIGFNTTF 453
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A3M8G6P5_9BACT (TonB-dependent receptor n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G6P5_9BACT) HSP 1 Score: 330 bits (847), Expect = 4.130e-104 Identity = 151/191 (79.06%), Postives = 173/191 (90.58%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 LS A +GDLRFVDVNGDG+LNGEDRT IGS IPDFVYGFN+ L YK FD+SI QGQ GNEIFNGKNVVRPDPYNFEQHVW+RWTGEGTSN+EPR +YGGYNFLPSDRFIHDGS+LRLR+ IIGY LP S Q++LGL++AR Y+KA NLLT T+YTGYTPEIGS++V++NGIDTG+YPIPRVIS+GFNT+F Sbjct: 834 LSQADVGDLRFVDVNGDGVLNGEDRTFIGSPIPDFVYGFNLDLFYKNFDLSIGLQGQIGNEIFNGKNVVRPDPYNFEQHVWNRWTGEGTSNSEPRVTYGGYNFLPSDRFIHDGSFLRLRTVIIGYQLPPSYQSRLGLREARLYVKANNLLTITQYTGYTPEIGSQSVIANGIDTGIYPIPRVISVGFNTSF 1024
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A6I7QEV3_9BACT (TonB-dependent receptor (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7QEV3_9BACT) HSP 1 Score: 307 bits (786), Expect = 6.040e-104 Identity = 140/191 (73.30%), Postives = 165/191 (86.39%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 +S AGIGDLRF+D NGDG +NG+DRT +GS IP FVYGF++ L+Y+ +D+S+ QGQYGN+IFNGKNVVRPDPYNFEQHVW+RWTGEGTS+TEPR SYGGYNFLPSDRFI DGSY+R+RS IGYSLP L ++L + +AR YLKATNL T T Y+GYTPEIGS +VLSNGIDTG+YPIPRV + GFNTTF Sbjct: 37 MSQAGIGDLRFLDTNGDGQINGDDRTYLGSPIPKFVYGFSLDLNYRYWDLSLGIQGQYGNKIFNGKNVVRPDPYNFEQHVWNRWTGEGTSDTEPRPSYGGYNFLPSDRFIQDGSYVRIRSLNIGYSLPPGLTSRLNITRARIYLKATNLFTLTGYSGYTPEIGSGDVLSNGIDTGIYPIPRVFAAGFNTTF 227
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A521BW36_9BACT (TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521BW36_9BACT) HSP 1 Score: 326 bits (836), Expect = 1.650e-102 Identity = 148/191 (77.49%), Postives = 170/191 (89.01%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 +S AG+GDLRF D+NGDG +NG+DRT IGS IPDFVYGF++ L+YK +D+S+ QGQYGNEIFNGKNVVRPDPYNFE HVWDRWTGEGTSN+EPR SYGGYN+LPSDRFI DGSYLRLRS +IGYSLPV+L KLGL +AR Y+K TNL T+TKYTGYTPEIGS +VLSNGIDTG+YPIPRV+ +GFNTTF Sbjct: 834 MSQAGVGDLRFKDINGDGEINGDDRTFIGSPIPDFVYGFSVDLNYKNWDMSVGLQGQYGNEIFNGKNVVRPDPYNFEAHVWDRWTGEGTSNSEPRPSYGGYNYLPSDRFIQDGSYLRLRSLVIGYSLPVNLTEKLGLSRARVYMKGTNLFTWTKYTGYTPEIGSGDVLSNGIDTGIYPIPRVVYLGFNTTF 1024
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A6C1P3T6_9BACT (TonB-dependent receptor n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6C1P3T6_9BACT) HSP 1 Score: 318 bits (815), Expect = 2.050e-99 Identity = 145/188 (77.13%), Postives = 166/188 (88.30%), Query Frame = 1 Query: 10 AGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 AG+GDLRFVD+NGDG++NG DRT +GS IP FVYGFN+ LDYK +D S FQGQYGN+IFNGKN VRPDPYNFE HVWDRWTGEGTSNTEPR S+GGYNFLPSDRFIHDGS++RLR+ IIGYSLP S+ LG+ +AR Y+K NLLT+TKYTGYTPEIGS +VLSNGID+GVYPIPRVI++GFNTTF Sbjct: 843 AGVGDLRFVDMNGDGVINGLDRTYLGSPIPKFVYGFNLDLDYKNWDFSAGFQGQYGNKIFNGKNAVRPDPYNFEAHVWDRWTGEGTSNTEPRPSFGGYNFLPSDRFIHDGSFVRLRTLIIGYSLPGSMLANLGITRARVYIKGNNLLTWTKYTGYTPEIGSFDVLSNGIDSGVYPIPRVITLGFNTTF 1030
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: UPI001F1A9EA2 (TonB-dependent receptor n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F1A9EA2) HSP 1 Score: 315 bits (806), Expect = 4.080e-98 Identity = 143/191 (74.87%), Postives = 162/191 (84.82%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 LS+AG+GDLRFVD NGDG LNG+DRT IGS IPD VYGF++ L Y+ +D+S+ FQGQYGNE+FNGKN VRPDPYNFEQHVWDRWTGEGTSN+EPR SYGGYN+LPSDRFI DGSYLRLRS +GYSLP L L + +AR Y+K NL T+T YTGYTPEIGS NVLSNGIDTG+YPIPRV S+G NTTF Sbjct: 839 LSNAGVGDLRFVDTNGDGTLNGDDRTFIGSPIPDLVYGFSVDLAYQNWDLSVAFQGQYGNELFNGKNAVRPDPYNFEQHVWDRWTGEGTSNSEPRPSYGGYNYLPSDRFIQDGSYLRLRSIALGYSLPTGLVNNLNMTRARIYVKGNNLFTWTSYTGYTPEIGSGNVLSNGIDTGIYPIPRVFSVGINTTF 1029
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A6I7NTN8_9BACT (TonB-dependent receptor n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7NTN8_9BACT) HSP 1 Score: 311 bits (797), Expect = 8.230e-97 Identity = 143/191 (74.87%), Postives = 167/191 (87.43%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 +S AG+GDLRFVD N DG ++G+DRT +GS IP FVYGF+ LDYK +D+S+ FQGQ+GN+IFNGKNVVRPDPYNFEQHVW+RWTGEGTSN+EPR SYGGYNFLPSDRFIHDGSYLRLRS GYSLP+SL +L + QAR Y+KATNL T+T Y+GYTPEIGS +VLS+GIDTG+YPIPRV+SIG NTTF Sbjct: 839 MSLAGVGDLRFVDTNNDGQISGDDRTYLGSPIPRFVYGFSFDLDYKNWDLSLGFQGQHGNKIFNGKNVVRPDPYNFEQHVWNRWTGEGTSNSEPRPSYGGYNFLPSDRFIHDGSYLRLRSLNFGYSLPLSLTGRLNMNQARIYVKATNLFTWTGYSGYTPEIGSGDVLSSGIDTGIYPIPRVVSIGVNTTF 1029
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A3B8VGM7_9BACT (TonB-dependent receptor n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3B8VGM7_9BACT) HSP 1 Score: 305 bits (782), Expect = 1.170e-94 Identity = 139/191 (72.77%), Postives = 162/191 (84.82%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 +S AGIGDL+F DVN DG++NG DRT +GS IPDFVYG N+ +++ +D+ I QGQ GN+IFNGKNVVRPDPYNFE HVWDRWTGEGTSNTEPR S+GGYNFLPSDRFIHDGS+LRLR+ +GYSLP + ++L + ARFYLKA NL+TFTKYTGYTPEIGS +VLSNGID G YPIPRVI+ GFNTTF Sbjct: 836 MSQAGIGDLKFKDVNEDGVINGLDRTYLGSPIPDFVYGVNLDFNWRNWDLGIGLQGQMGNKIFNGKNVVRPDPYNFEAHVWDRWTGEGTSNTEPRPSFGGYNFLPSDRFIHDGSFLRLRTLTLGYSLPSTFLSRLSIDNARFYLKANNLITFTKYTGYTPEIGSNDVLSNGIDYGTYPIPRVITFGFNTTF 1026
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A2E9UFK2_9BACT (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E9UFK2_9BACT) HSP 1 Score: 303 bits (776), Expect = 6.930e-94 Identity = 134/191 (70.16%), Postives = 162/191 (84.82%), Query Frame = 1 Query: 1 LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 LS AG+GDLRFVD+N DG++NG+DR+ IGS IPDF+YGF++SLDY+ FD+S+ QGQ GNEIFNGKNVVRPDPYNFE+HVW+RWTGEGTSN+EPR S+GGYN+LPSDRFIHDGSYLRL+ +IGY+LP + K+ L R Y+KA N +T TKYTGYTPEIG +VLSNGID G+YPIPR+ S G NT+F Sbjct: 821 LSQAGVGDLRFVDINNDGVINGDDRSYIGSPIPDFIYGFSVSLDYRGFDLSLSIQGQTGNEIFNGKNVVRPDPYNFEKHVWNRWTGEGTSNSEPRPSFGGYNYLPSDRFIHDGSYLRLKDLVIGYTLPEKICQKINLDLFRVYIKANNFVTITKYTGYTPEIGGYDVLSNGIDRGIYPIPRIFSFGVNTSF 1011
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Match: A0A1V5JG03_9BACT (TonB dependent receptor n=1 Tax=Bacteroidetes bacterium ADurb.BinA012 TaxID=1852815 RepID=A0A1V5JG03_9BACT) HSP 1 Score: 285 bits (730), Expect = 3.230e-89 Identity = 134/190 (70.53%), Postives = 154/190 (81.05%), Query Frame = 1 Query: 4 SHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVSIDFQGQYGNEIFNGKNVVRPDPYNFEQHVWDRWTGEGTSNTEPRASYGGYNFLPSDRFIHDGSYLRLRSFIIGYSLPVSLQTKLGLKQARFYLKATNLLTFTKYTGYTPEIGSENVLSNGIDTGVYPIPRVISIGFNTTF 573 S AG+GDLRFVDV GDGIL+G DRT IGS IP F++GFN ++YK D+S+DFQGQ GN+IFNGK VVRPDPYNFE+HV+DRWTG GTSNTEPR S+GGYN+ PSDRFIHDGS+LRLRS +GY+LP SL K ++Q R YLK TNL T TK+TGYTPEIGS +VLSNGID GVYPI SIG N F Sbjct: 551 SQAGVGDLRFVDVTGDGILDGRDRTFIGSPIPKFIFGFNGMIEYKGMDLSVDFQGQTGNKIFNGKEVVRPDPYNFEKHVFDRWTGPGTSNTEPRPSFGGYNYTPSDRFIHDGSFLRLRSVTLGYTLPASLSQKAYIRQLRVYLKGTNLFTMTKFTGYTPEIGSYDVLSNGIDYGVYPITSAYSIGVNLLF 740 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105756.1230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105756.1230.1 >prot_M-pyrifera_M_contig105756.1230.1 ID=prot_M-pyrifera_M_contig105756.1230.1|Name=mRNA_M-pyrifera_M_contig105756.1230.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp LSHAGIGDLRFVDVNGDGILNGEDRTNIGSSIPDFVYGFNISLDYKQFDVback to top mRNA from alignment at M-pyrifera_M_contig105756:2..577+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105756.1230.1 ID=mRNA_M-pyrifera_M_contig105756.1230.1|Name=mRNA_M-pyrifera_M_contig105756.1230.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig105756:2..577+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105756:2..577+ >mRNA_M-pyrifera_M_contig105756.1230.1 ID=mRNA_M-pyrifera_M_contig105756.1230.1|Name=mRNA_M-pyrifera_M_contig105756.1230.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1152bp|location=Sequence derived from alignment at M-pyrifera_M_contig105756:2..577+ (Macrocystis pyrifera P11B4 male)back to top |