mRNA_M-pyrifera_M_contig105580.1201.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A7X5WVD7_9ACTN (MurNAc-LAA domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WVD7_9ACTN) HSP 1 Score: 159 bits (402), Expect = 2.950e-44 Identity = 102/213 (47.89%), Postives = 123/213 (57.75%), Query Frame = 1 Query: 1 IPALGDDVLGAVRSDTGVLLPITDSDGEVWFVLGPCGDVQIEPAGTAMVVGAQHVVLDPGQGDDDAG----------QVNLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPRPTVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVAAARAEL 609 +P L D GAV + G L IT +DGE W VL CG A +A VVG QHVVLDPG G +D G +VNL VA RAA +L GV V LTR G ++ + R A AVGA VF+SIQ D G S P FHR DD +SRRLAGL+ +E+ A ++A EPGV+PLLNQRGED+ VLR + GVAAA E+ Sbjct: 61 LPPLAADATGAVVTPQGAALAITGTDGESWLVLDTCGAPGSVSAPSATVVGPQHVVLDPGNGGEDRGTVGPGGVDEAEVNLDVARRAADVLRGHGVAVLLTRDGDVGMTASARAAVADAVGAQVFLSIQHRDGPGDRST-VPGTESFHRIDDPDSRRLAGLVFEEVQAGLGPRAAGWLAPAEPGVKPLLNQRGEDFHTVLRETVGVAAAFVEV 272
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A349B4H6_9ACTN (MurNAc-LAA domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B4H6_9ACTN) HSP 1 Score: 102 bits (255), Expect = 1.310e-22 Identity = 75/214 (35.05%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 4 PALGDD-VLGAVRSDTGVLLPITDSDGEVWFVLGPCGDVQIEPAGTAMVVGAQHVVLDPGQGDDDAGQV----------NLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEA-PRPTVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQR-GEDYFGVLRASEGVAAARAE 606 PA+ D + AVR+ G++LP+ + W VL PC + P V+GA HVVLDPG G D+ G V NL +A R ALL A+G V LTR ++ ATR + + F+SI N V P ++H+ D S+RLAGLL +E+ + D+PG R + R G+DY+G+LR ++GV + E Sbjct: 66 PAIADHGEVRAVRTPVGLVLPVLGGEQGAWQVLTPCATSAVVPG--EPVLGA-HVVLDPGHGGDEPGAVGPTGLREADLNLDIARRVRALLEAEGATVVLTRDADVRMTLATRASIARTMSPVAFLSIHH--NAAPVGRSGVPGSELYHQLADPESKRLAGLLWEEMQEHLAPFGTDWAIGDDPGARARRSMRTGDDYYGILRNAQGVTSVLTE 274
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A2N5JZ79_9ACTN (MurNAc-LAA domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JZ79_9ACTN) HSP 1 Score: 96.7 bits (239), Expect = 3.050e-20 Identity = 71/217 (32.72%), Postives = 104/217 (47.93%), Query Frame = 1 Query: 1 IPALGDDVLGAVRSDTGVLLPITDSDGEVWFVLGPCGDVQIEPAGTAMVVGAQHVVLDPGQGDDDAGQV----------NLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPR----PTVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVAAARAEL 609 +P+ G GAV + G++LP+ +G+ + V PC + VV VVLDPG G + G V NLAV A A L GV TRTG ++ ATR A+ FVS+ + PR +++ A+S+RL+GL+++E+ A P+VA + G + N+ G DY+G+LR S+GV A AEL Sbjct: 83 LPSAGTASSGAVVTQRGLVLPLLRREGDGFLVETPCSRTAVVQGS---VVPRATVVLDPGHGGTEPGAVGPNGLSEKGLNLAVVNHARAALERAGVTTMSTRTGDHRVTLATRAKVAKALKPRAFVSVHH-----NAEPDGPRVGPGTETYYQIASADSKRLSGLIYEEVVQALSAYTIPWVADTDAGAKYRTNRAGGDYYGILRLSQGVPAVLAEL 291
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A7V9GHW0_9ACTN (N-acetylmuramoyl-L-alanine amidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9GHW0_9ACTN) HSP 1 Score: 94.0 bits (232), Expect = 1.850e-19 Identity = 72/196 (36.73%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 76 DGEVWFVLGPCGD------VQIEPAGTAMVVGAQHVVLDPGQGDDDAG----------QVNLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPRP--TVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVAAARAEL 609 DG+ W V PC + V EP+ VV+DPG G +AG VNLA+AER A L + G LTRTG ++S A R GA VFVS+ N AP P +++A +SRRLAGLLH+E + A +VA + G +P LN G DY+G+LR + GV + E+ Sbjct: 68 DGQ-WLVRTPCDEEVVLDAVSYEPSA--------EVVVDPGHGGAEAGAVGPGGTREADVNLAIAERVVARLRSAGRTAVLTRTGDYQVSIAFRAELAVRAGATVFVSVH---NNTVPDGPAPGPGTEAYYQASSPDSRRLAGLLHEETSAALSGREVAWVADTDAGAKPRLNAAGTDYYGLLRGAAGVTSVLLEI 251
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A6J4HED9_9ACTN (N-acetylmuramoyl-L-alanine amidase n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4HED9_9ACTN) HSP 1 Score: 92.8 bits (229), Expect = 5.570e-19 Identity = 73/215 (33.95%), Postives = 109/215 (50.70%), Query Frame = 1 Query: 4 PALGDDVLGAVRSDTGVLLPITDSDGEVWFVLGPCGDVQIEPAGTAMVVGAQHVVLDPGQGDDDAGQV----------NLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPRPTVFHRADDANSRRLAGLLHDE----LATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVAAARAE 606 P L + + S+ GV+LP+ G+ + V+ PCG+ ++ +GT + + VV+DPG G ++ G V NL VA AA L A V V LTR ++ A RG A+ VFVSI + S P V+H+ A S+RL+GL++++ LA A + +VA + PGV + G DY+GVLR ++G AA E Sbjct: 52 PPLAEGGPRLIVSNKGVVLPVLGPAGDAFRVVTPCGN-EVAASGTPLT--SIDVVIDPGHGGEETGAVGPGGLREKDLNLVVAAHAARSLQAQDVSVLLTRRADYRMTLAARGLVVEAIRPKVFVSIHHNAGATQPSPVGPGTEVYHQHASAESKRLSGLVYEDVKGYLAKARNVA---WVAAERPGVVARVGASGNDYYGVLRRTQGTPAALIE 260
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A6J7AUD9_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J7AUD9_9ZZZZ) HSP 1 Score: 90.5 bits (223), Expect = 6.220e-18 Identity = 82/217 (37.79%), Postives = 112/217 (51.61%), Query Frame = 1 Query: 1 IPA-LGDDVLGAVRSDTGVLLPITDSDGEVWFVL-GPCGDVQIEPAGTAMVVGAQHVVLDPGQGDD-DAGQV----------NLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPRPTVFHRADDA-NSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVAAARAEL 609 IPA L D AV + TGV+ + + FV+ PCG T +V A +VVLDPG G D G V NLAVA+ AAA L A GV V LTRT + A+R ++ FVSI V E+ P V+++ADD +S+RLAGL+++E+ A + + GV+ LN +G DY+G+LR + GV +A AEL Sbjct: 91 IPAVLADGKPRAVVTSTGVVAAVDSVRADGAFVVTSPCGAAVAVSKATPIV--AANVVLDPGHGGALDPGTVGPTGTKEAAVNLAVAQAAAAQLEAFGVKVVLTRTADYYSTLASRARVATSLAPNAFVSIHHNGAPDHV-EDRPGTEVYYQADDERSSKRLAGLIYEEVTIALAPQKIRWGWYADAGVKARLNDQGRDYYGILRNAAGVPSALAEL 304
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A7Y3BZS7_9ACTN (N-acetylmuramoyl-L-alanine amidase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3BZS7_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 1.800e-17 Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 160 HVVLDPGQGDDDAGQV----------NLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPRPTVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVAAARAE 606 V++DPG G D+ G V NL VAER L GV LTRT ++ A RG V VF+SI + E P VFH+ ++SRRLAGL+++EL T +L + A PG +LN G DY+GVLR ++G+ + +E Sbjct: 7 QVLIDPGHGGDETGAVASSGLRESDLNLDVAERLQRFLEYRGVSTLLTRTDDYRVAIAARGELAQRVEPDVFISIHHNGGPTTPTRE-PGTLVFHQVASSDSRRLAGLVYEELVTTLSSLDVSYAAGSPPGAVAMLNDSGLDYYGVLRRTDGITSVLSE 164
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A7V8WY17_9ACTN (N-acetylmuramoyl-L-alanine amidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8WY17_9ACTN) HSP 1 Score: 85.9 bits (211), Expect = 2.530e-16 Identity = 71/213 (33.33%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 4 PALGDDVLGAVRSDTGVLLPITDSDGE-VWFVLGPCGDVQIEPAGTAMVVGAQHVVLDPGQGDDDAG----------QVNLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPRPTVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLN-QRGEDYFGVLRASEGVAAARAE 606 PAL AV + TG++LP+ G+ + V PC + T + HVVLDPG G + G VNLAVA+R A L A G VV LTR ++ +TRG G + FVSI + S P V+ + SRRLAGL+ +E+ A + + + G R + G D++G+LR + GVAA +E Sbjct: 75 PALVPGPARAVVTPTGLVLPVVADRGDGTYDVQTPCA---VAGVATGTPLSGAHVVLDPGHGGSEPGAVGPNGLREKDVNLAVAQRLATALRAQGAVVVLTRDLDVRMTLSTRGLLGTTLAPLAFVSIHHNADPDGPSG-GPGTEVYFQVASEPSRRLAGLMVEEVRAALAPFGVAWTSDAQNGARARIRADDGTDFYGILRRTAGVAAVLSE 283
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A3M2GJR8_ACTSX (MurNAc-LAA domain-containing protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GJR8_ACTSX) HSP 1 Score: 82.0 bits (201), Expect = 7.860e-15 Identity = 74/199 (37.19%), Postives = 98/199 (49.25%), Query Frame = 1 Query: 49 GVLLPITDS--DGEVWFVLGPCGD-VQIEPAGTA--MVVGAQHVVLDPGQGDDDAGQV----------NLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGR---VSEEAPRPTVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVA 591 GV +P+ + DG V V GPCG+ V+++ TA + V A H+V+DP G D G V NL +A LAA GV TRT +++ R A A+ A + V + G V P V++R DA SRRL GL+H+ELA A L GP+ DE GV LNQR ED L ++G A Sbjct: 104 GVTVPVLAALDDGSV-EVRGPCGNRVRLDATATAGAVSVDAAHLVVDPAHGGADPGVVGPDGIGEADQNLELARLLVDALAARGVEAVPTRTADVDLAVEARVAVAAALDAPLVVIGHHTADPGAPDAVRGPDPGVEVWYRTGDAASRRLGGLVHEELAAALAALGGPWWHDDEAGVVHRLNQRAEDLRRPLALADGPA 301
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Match: A0A7W0A0I8_9ACTN (N-acetylmuramoyl-L-alanine amidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0A0I8_9ACTN) HSP 1 Score: 81.3 bits (199), Expect = 1.110e-14 Identity = 68/202 (33.66%), Postives = 94/202 (46.53%), Query Frame = 1 Query: 34 VRSDTGVLLPITDSDGEVWFVLGPCGDVQIEPAGTAMVVGAQHVVLDPGQGDDDAGQ----------VNLAVAERAAALLAADGVVVALTRTGGAEISEATRGAGGPAVGAAVFVSIQRGDNTGRVSEEAPRPTVFHRADDANSRRLAGLLHDELATAFDTLAGPFVAQDEPGVRPLLNQRGEDYFGVLRASEGVAAARAEL 609 V S GV+LP+ +G + V PC + + G VVG VVLD G G D+ G VNLAVA A A L G LTRTG ++ R A+ +VSI ++ P F++ A S+RLAGL+++E+ A +VA + G + N RG DY+ +LR + V A AEL Sbjct: 82 VVSPKGVVLPVKGREGGGYRVETPCANSAVV-RGATPVVGVP-VVLDVGHGGDEEGAKGPNGLTEKVVNLAVAGYARAALQRQGTPAVLTRTGDYRMTLGARAEVALALRPRAYVSIHH-NSVPDGPRAGPGTETFYQLGSAGSKRLAGLIYEEVVNALSNYRVAWVADRDAGAKYRPNSRGGDYYAILRQAGSVTAVLAEL 280 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105580.1201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105580.1201.1 >prot_M-pyrifera_M_contig105580.1201.1 ID=prot_M-pyrifera_M_contig105580.1201.1|Name=mRNA_M-pyrifera_M_contig105580.1201.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp IPALGDDVLGAVRSDTGVLLPITDSDGEVWFVLGPCGDVQIEPAGTAMVVback to top mRNA from alignment at M-pyrifera_M_contig105580:23..634+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105580.1201.1 ID=mRNA_M-pyrifera_M_contig105580.1201.1|Name=mRNA_M-pyrifera_M_contig105580.1201.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig105580:23..634+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105580:23..634+ >mRNA_M-pyrifera_M_contig105580.1201.1 ID=mRNA_M-pyrifera_M_contig105580.1201.1|Name=mRNA_M-pyrifera_M_contig105580.1201.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig105580:23..634+ (Macrocystis pyrifera P11B4 male)back to top |