mRNA_M-pyrifera_M_contig105567.1195.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: A0A8B8C6Z4_CRAVI (Phosphodiesterase delta-like protein n=3 Tax=Crassostrea TaxID=6564 RepID=A0A8B8C6Z4_CRAVI) HSP 1 Score: 128 bits (322), Expect = 5.880e-36 Identity = 62/103 (60.19%), Postives = 81/103 (78.64%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFY 315 AR+PK+IL+C +V+REI FSSK A++KF L QRV F G C+EEW FEFGFVIPGSTN+W+ I++A E M+PA VL+G ++IET F DG +V K+ V+IFY Sbjct: 44 ARVPKKILKCRAVSREINFSSKEAMDKFRLEQRVLFKGKCLEEWFFEFGFVIPGSTNTWQSVIEAAPESQMMPANVLTGNVIIETHFFDGDLLVSKSKVKIFY 146
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: L1ITV1_GUITC (GMP_PDE_delta domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1ITV1_GUITC) HSP 1 Score: 127 bits (320), Expect = 1.590e-35 Identity = 55/102 (53.92%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKEMLPAAVLSGKLVIETLFLDGKEIVGKASVRIFYE 318 A +P++IL C SV+RE+ FSS ++ F LLQ++YF G+C EEW F+FGFV+P STNSW+ TI++A EMLPA +LSG + IE+ F DG+ ++ K+ +R+FYE Sbjct: 56 AHVPREILACKSVSREVRFSSVEKMDDFKLLQKIYFQGSCFEEWFFKFGFVMPNSTNSWQSTIEAAPEMLPAEILSGNVTIESNFFDGERLLAKSLIRVFYE 157
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: V4BQV6_LOTGI (Phosphodiesterase delta-like protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BQV6_LOTGI) HSP 1 Score: 127 bits (318), Expect = 2.380e-35 Identity = 60/103 (58.25%), Postives = 81/103 (78.64%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFY 315 AR+PK+IL+C +V+RE+ FSSK A+EKF L QRV F G C+E+W FEFGFVIPGSTN+W+ I++A E M+PA++L+G ++IET F DG +V + VRIFY Sbjct: 44 ARVPKKILKCRAVSRELNFSSKEAMEKFRLEQRVLFKGKCLEDWFFEFGFVIPGSTNTWQSVIEAAPESQMMPASILNGNVLIETRFFDGDLLVSTSKVRIFY 146
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: UPI001EB082EA (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB082EA) HSP 1 Score: 127 bits (318), Expect = 2.380e-35 Identity = 62/103 (60.19%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFY 315 AR+PK+IL+C +V+RE+ FSS+ A+EKF L QRV F G C+EEW FEFGFVIPGSTN+W+ I++A E M+PA VL+G +VIET F DG +V + VRIFY Sbjct: 44 ARVPKKILKCRAVSRELNFSSQEAMEKFRLEQRVLFKGKCLEEWYFEFGFVIPGSTNTWQSVIEAAPESQMMPANVLNGNVVIETNFFDGDMMVSTSKVRIFY 146
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: D7FJM2_ECTSI (GMP_PDE_delta domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM2_ECTSI) HSP 1 Score: 126 bits (316), Expect = 3.070e-35 Identity = 64/104 (61.54%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFYE 318 A +P++ILECS+V+REI F+S+ I +F L QRV+ G CIEEW F+FGFVIPGSTNSW+QTI+SA E ML A LSG++ IET FLDG+ ++ K VRIFYE Sbjct: 29 ATVPRRILECSAVSREINFTSQEEIRQFRLEQRVFLAGACIEEWFFDFGFVIPGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGRTMLFKTLVRIFYE 132
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: UPI001E1E07E9 (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E07E9) HSP 1 Score: 125 bits (315), Expect = 6.790e-35 Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFY 315 AR+PK+IL+C +V+REI FSSK A+EKF L Q+V F G C+EEW FEFGFVIPGSTN+W+ I++A E M+PA VL+G +VIET F D +V + VRIFY Sbjct: 44 ARVPKKILKCRAVSREINFSSKEAMEKFRLEQKVLFKGKCLEEWLFEFGFVIPGSTNTWQSVIEAAPESQMMPANVLNGNVVIETRFYDDAVLVSTSKVRIFY 146
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: UPI000D738A8E (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta-like isoform X1 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D738A8E) HSP 1 Score: 125 bits (315), Expect = 6.790e-35 Identity = 60/103 (58.25%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFY 315 AR+PK+IL+C +V+REI FSSK A++KF L Q+V F G C+EEW FEFGFVIPGSTN+W+ I++A E M+PA VL+G ++IET F DG +V + VR+FY Sbjct: 44 ARVPKKILKCRAVSREINFSSKEAMDKFRLEQKVLFKGKCLEEWYFEFGFVIPGSTNTWQSVIEAAPENQMMPANVLNGNVMIETCFYDGDLLVSTSKVRVFY 146
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: A0A7R9GG15_9CRUS (Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9GG15_9CRUS) HSP 1 Score: 125 bits (314), Expect = 9.630e-35 Identity = 62/103 (60.19%), Postives = 78/103 (75.73%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFY 315 AR+P++IL C SV+REI FSS A+EKF L QRV F G C+EEW FEFGFVIP STN+W+ I++A E M+PA VLSG +VIET F DG +V ++VR+FY Sbjct: 44 ARVPRKILSCRSVSREINFSSAQAMEKFRLEQRVLFKGTCLEEWFFEFGFVIPNSTNTWQSVIEAAPEAQMMPANVLSGNVVIETKFFDGDLLVSTSNVRLFY 146
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: A0A5E4AKI9_MARMO (Retinal rod rhodopsin-sensitive cGMP 3' 5'-cyclic phosphodiesterase subunit delta n=1 Tax=Marmota monax TaxID=9995 RepID=A0A5E4AKI9_MARMO) HSP 1 Score: 124 bits (311), Expect = 1.200e-34 Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = 1 Query: 1 FLSAARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKE--MLPAAVLSGKLVIETLFLDGKEIVGKASVRIFY 315 FL +AR+PK+IL+C +V+RE+ FSS +EKF L Q+VYF G C+EEW FEFGFVIP STN+W+ I++A E M+PA+VL+G ++IET F D +V + VR+FY Sbjct: 12 FLLSARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFY 118
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Match: A0A7S2CPL1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPL1_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.260e-34 Identity = 55/102 (53.92%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 13 ARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFEFGFVIPGSTNSWEQTIDSAKEMLPAAVLSGKLVIETLFLDGKEIVGKASVRIFYE 318 A +PK IL C +++REI F++ + F L QR++F+G C+EEW F+FGFVIPGSTNSW+Q+I++A +M+PA +LSG +VIET F DG ++V K VR+FY+ Sbjct: 105 AHVPKAILSCRAISREINFTAAKELRNFRLEQRIFFNGQCMEEWLFDFGFVIPGSTNSWQQSIEAADQMMPAELLSGNIVIETKFFDGDDLVIKFDVRVFYD 206 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105567.1195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105567.1195.1 >prot_M-pyrifera_M_contig105567.1195.1 ID=prot_M-pyrifera_M_contig105567.1195.1|Name=mRNA_M-pyrifera_M_contig105567.1195.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp FLSAARIPKQILECSSVAREIVFSSKCAIEKFHLLQRVYFDGNCIEEWPFback to top mRNA from alignment at M-pyrifera_M_contig105567:158..579- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105567.1195.1 ID=mRNA_M-pyrifera_M_contig105567.1195.1|Name=mRNA_M-pyrifera_M_contig105567.1195.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=422bp|location=Sequence derived from alignment at M-pyrifera_M_contig105567:158..579- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105567:158..579- >mRNA_M-pyrifera_M_contig105567.1195.1 ID=mRNA_M-pyrifera_M_contig105567.1195.1|Name=mRNA_M-pyrifera_M_contig105567.1195.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig105567:158..579- (Macrocystis pyrifera P11B4 male)back to top |