mRNA_M-pyrifera_M_contig105537.1188.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105537.1188.1
Unique NamemRNA_M-pyrifera_M_contig105537.1188.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A2E2TGC7_9GAMM (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TGC7_9GAMM)

HSP 1 Score: 378 bits (971), Expect = 9.400e-131
Identity = 189/211 (89.57%), Postives = 201/211 (95.26%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPAAI 633
            IYVPAPFCKDSIIEA DAGI+LI+CITEGIP  DML+VKA LE N++ARLIGPNCPGVITPG CKIGIMPGHIH PG+VGIVSRSGTLTYEAVNQTTALGFGQS+CVGIGGDPIPGTNFIDVLA+FEKDPQTEAIVMVGEIGG+AEEEAAEFIKHNV+KPV+SYIAGVTAPEGKRMGHAGAIIAGGKGTA EKFA LE+AGVHTV SPAAI
Sbjct:   71 IYVPAPFCKDSIIEAADAGIKLIICITEGIPTLDMLQVKAYLESNTDARLIGPNCPGVITPGECKIGIMPGHIHMPGRVGIVSRSGTLTYEAVNQTTALGFGQSSCVGIGGDPIPGTNFIDVLAMFEKDPQTEAIVMVGEIGGTAEEEAAEFIKHNVTKPVISYIAGVTAPEGKRMGHAGAIIAGGKGTAAEKFAVLESAGVHTVRSPAAI 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A2E3MJP7_9GAMM (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MJP7_9GAMM)

HSP 1 Score: 361 bits (927), Expect = 4.520e-124
Identity = 184/211 (87.20%), Postives = 194/211 (91.94%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPAAI 633
            IYVPAPFCKDSIIEA DAGI+LIVCITEGIP  DML+VKA L+ N+ ARLIGPNCPGVITPG CKIGIMPGHIH  GKVGIVSRSGTLTYEAV QTT LG+GQSTCVGIGGDPIPGTNFIDVLA+F+ DPQTEAIVMVGEIGGSAEEEAAEFIK NV+KPVVSYIAGVTAP GKRMGHAGAIIAGGKGTA EKFAALE+AGVHTV +PA I
Sbjct:   71 IYVPAPFCKDSIIEAADAGIKLIVCITEGIPTLDMLDVKAYLDANTEARLIGPNCPGVITPGECKIGIMPGHIHMAGKVGIVSRSGTLTYEAVAQTTELGYGQSTCVGIGGDPIPGTNFIDVLAMFQDDPQTEAIVMVGEIGGSAEEEAAEFIKSNVTKPVVSYIAGVTAPPGKRMGHAGAIIAGGKGTAAEKFAALESAGVHTVRNPAQI 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: K2BGF2_9BACT (Succinate--CoA ligase [ADP-forming] subunit alpha n=2 Tax=uncultured bacterium TaxID=77133 RepID=K2BGF2_9BACT)

HSP 1 Score: 357 bits (916), Expect = 2.130e-122
Identity = 182/211 (86.26%), Postives = 191/211 (90.52%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPAAI 633
            IYVPAPFCKDSIIEAV+AGI+LIVCITEGIP  DML+VKA +    N RLIGPNCPGVITPG CKIGIMPGHIH PGKVGIVSRSGTLTYEAV QTT LG GQSTCVGIGGDPIPGTNFIDVLALFEKDPQTE IVMVGEIGG+AE+EAAE+IK +V+KPVVSYIAGVTAP GKRMGHAGAIIAGGKGTA EKFA LEAAGVHTV SPA I
Sbjct:   71 IYVPAPFCKDSIIEAVEAGIKLIVCITEGIPTLDMLDVKAFMAQYPNVRLIGPNCPGVITPGECKIGIMPGHIHMPGKVGIVSRSGTLTYEAVQQTTELGLGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEIIVMVGEIGGTAEDEAAEYIKKHVTKPVVSYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAVLEAAGVHTVHSPAEI 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A849I4T3_9GAMM (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A849I4T3_9GAMM)

HSP 1 Score: 356 bits (914), Expect = 3.870e-122
Identity = 180/211 (85.31%), Postives = 195/211 (92.42%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPAAI 633
            IYVPAPF  DSIIEA DAGI LI+CITEG+P  DML+VKA LE N+++ LIGPNCPGVITPG CKIGIMPGHIHQPG+VGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPG+ FID+L +FE DPQTEAI+MVGEIGGSAEEEAAEFIK+NV+KPVVSYIAGVTAP GKRMGHAGAIIAGGKGTA EKFAALEAAGV+TV SPA+I
Sbjct:   71 IYVPAPFAMDSIIEAADAGILLIICITEGVPVLDMLKVKAYLEANTDSILIGPNCPGVITPGQCKIGIMPGHIHQPGRVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGSTFIDILDMFENDPQTEAIIMVGEIGGSAEEEAAEFIKYNVTKPVVSYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEAAGVNTVHSPASI 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A5E4PHE4_9COXI (Succinate--CoA ligase [ADP-forming] subunit alpha n=4 Tax=Bacteria TaxID=2 RepID=A0A5E4PHE4_9COXI)

HSP 1 Score: 355 bits (912), Expect = 8.660e-122
Identity = 178/209 (85.17%), Postives = 190/209 (90.91%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPA 627
            IYVPAP+CKDSI+EAVDAGI LIVCITEGIP  DMLEVKAC++ +   RLIGPNCPG+ITPG CKIGIMPG+IH+PGKVGIVSRSGTLTYEAV QT+ LG GQSTCVGIGGDPIPGTNFIDVL +FEKDPQTE IVMVGEIGGSAEEEAA FIK +VSKPVV+YIAGVTAP GKRMGHAGAIIAGGKGTA EKF ALEAAGVHTV SPA
Sbjct:   71 IYVPAPYCKDSILEAVDAGIRLIVCITEGIPVLDMLEVKACIDQHPEVRLIGPNCPGIITPGECKIGIMPGYIHKPGKVGIVSRSGTLTYEAVKQTSDLGLGQSTCVGIGGDPIPGTNFIDVLGMFEKDPQTEIIVMVGEIGGSAEEEAAAFIKQHVSKPVVAYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFKALEAAGVHTVHSPA 279
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A0W0VSD3_9GAMM (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Legionella londiniensis TaxID=45068 RepID=A0A0W0VSD3_9GAMM)

HSP 1 Score: 354 bits (908), Expect = 3.170e-121
Identity = 179/209 (85.65%), Postives = 192/209 (91.87%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPA 627
            IYVPAPFCKDSI+EA DAGIELIVCITEGIP  DML+VK  LE NSN+RLIGPNCPG+ITPGACKIGIMPG IH PGKVGIVSRSGTLTYEAV QTT  GFGQSTCVGIGGDPIPGTNFIDVLALFEKD QTEAI++VGEIGG+AEEEAAEFI+ NV KPVV+YIAGVTAP GKRMGHAGAII+GGKGTA++KF ALEAAGV TV+SPA
Sbjct:   71 IYVPAPFCKDSILEAADAGIELIVCITEGIPVLDMLQVKVYLENNSNSRLIGPNCPGIITPGACKIGIMPGDIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQSTCVGIGGDPIPGTNFIDVLALFEKDEQTEAIILVGEIGGTAEEEAAEFIQSNVKKPVVAYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFKALEAAGVKTVNSPA 279
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A1G0IB00_9GAMM (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_28 TaxID=1798287 RepID=A0A1G0IB00_9GAMM)

HSP 1 Score: 353 bits (907), Expect = 4.990e-121
Identity = 179/211 (84.83%), Postives = 191/211 (90.52%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPAAI 633
            IYVPAPFCKDSI+EA+++GI+LIVCITEGIP  DMLEVKACL+ +   RLIGPNCPGVITPG CKIGIMPG+IH+PGKVGIVSRSGTLTYEAV QT  L  GQSTCVGIGGDPIPGTNFIDVL +FEKDPQTE IVMVGEIGGSAEEEAAEFIK +VSKPVV+YIAGVTAP GKRMGHAGAIIAGGKGTA EKF ALEAAGVHTV SPA I
Sbjct:   71 IYVPAPFCKDSILEALESGIKLIVCITEGIPVLDMLEVKACLDQHPGTRLIGPNCPGVITPGECKIGIMPGYIHKPGKVGIVSRSGTLTYEAVKQTADLDLGQSTCVGIGGDPIPGTNFIDVLGMFEKDPQTELIVMVGEIGGSAEEEAAEFIKSHVSKPVVAYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFKALEAAGVHTVRSPADI 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A0W0VDI2_9GAMM (Succinate--CoA ligase [ADP-forming] subunit alpha n=54 Tax=Legionellales TaxID=118969 RepID=A0A0W0VDI2_9GAMM)

HSP 1 Score: 353 bits (906), Expect = 6.390e-121
Identity = 179/209 (85.65%), Postives = 190/209 (90.91%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPA 627
            IYVPAPFCKDSI+EA DAGI+LIVCITEGIP  DML+VK  LE NS+ARLIGPNCPG+ITPG CKIGIMPG IH PGKVGIVSRSGTLTYEAV QTT  GFGQSTC+GIGGDPIPGTNFID LALFE+DPQTEAI+MVGEIGGSAEEEAAEFIK NV+KPVVSYIAGVTAP G+RMGHAGAII+GGKGTA EKFAALE AGV TV SPA
Sbjct:   71 IYVPAPFCKDSILEAADAGIKLIVCITEGIPVLDMLQVKVYLENNSDARLIGPNCPGIITPGECKIGIMPGSIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQSTCIGIGGDPIPGTNFIDALALFEQDPQTEAIIMVGEIGGSAEEEAAEFIKSNVTKPVVSYIAGVTAPPGRRMGHAGAIISGGKGTAAEKFAALEEAGVKTVRSPA 279
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A0H4VDI6_9COXI (Succinate--CoA ligase [ADP-forming] subunit alpha n=3 Tax=cellular organisms TaxID=131567 RepID=A0A0H4VDI6_9COXI)

HSP 1 Score: 352 bits (904), Expect = 1.240e-120
Identity = 178/211 (84.36%), Postives = 191/211 (90.52%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPAAI 633
            I+VPAPFCKDSIIEA+DAGI L++CITEG+P  DML VKA L+ + + RLIGPNCPGVITPG CKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTT L FGQSTCVGIGGDPIPGT+FIDVL LFEKDPQTEAIVMVGEIGG+AEEEAAEFIK +V KPVVSYIAGVTAP GKRMGHAGAII GGKGTA +K+AALEAAGV TV SPA I
Sbjct:   71 IFVPAPFCKDSIIEAIDAGISLVICITEGVPVLDMLTVKAYLKQHPDVRLIGPNCPGVITPGECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTQLDFGQSTCVGIGGDPIPGTSFIDVLELFEKDPQTEAIVMVGEIGGTAEEEAAEFIKSDVKKPVVSYIAGVTAPLGKRMGHAGAIITGGKGTAADKYAALEAAGVFTVKSPAEI 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Match: A0A1G0GHD8_9GAMM (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_14 TaxID=1798279 RepID=A0A1G0GHD8_9GAMM)

HSP 1 Score: 352 bits (904), Expect = 1.290e-120
Identity = 179/211 (84.83%), Postives = 190/211 (90.05%), Query Frame = 1 
Query:    1 IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARLIGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALGFGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAAEFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAAGVHTVSSPAAI 633
            IYVPAPFCKDSI+EA+DAGI+LIVCITEGIP  DMLEVK CL+ + NARLIGPNCPGVITPGACKIGIMPG+IHQPGKVGIVSRSGTLTYE V QT+    GQSTCVGIGGDPIPGTN+IDVLALFE DPQTE IVMVGEIGGSAEEEAAEFI+ +V KPVV+YIAGVTAP GKRMGHAGAIIAGGKGTA EKF ALEAAGV TV SPA I
Sbjct:   71 IYVPAPFCKDSILEALDAGIKLIVCITEGIPVIDMLEVKVCLDQHPNARLIGPNCPGVITPGACKIGIMPGYIHQPGKVGIVSRSGTLTYETVKQTSDHNLGQSTCVGIGGDPIPGTNYIDVLALFENDPQTEVIVMVGEIGGSAEEEAAEFIQSHVKKPVVAYIAGVTAPPGKRMGHAGAIIAGGKGTAAEKFKALEAAGVRTVRSPAEI 281
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105537.1188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2TGC7_9GAMM9.400e-13189.57Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A2E3MJP7_9GAMM4.520e-12487.20Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
K2BGF2_9BACT2.130e-12286.26Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A849I4T3_9GAMM3.870e-12285.31Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A5E4PHE4_9COXI8.660e-12285.17Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A0W0VSD3_9GAMM3.170e-12185.65Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A1G0IB00_9GAMM4.990e-12184.83Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A0W0VDI2_9GAMM6.390e-12185.65Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A0H4VDI6_9COXI1.240e-12084.36Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A1G0GHD8_9GAMM1.290e-12084.83Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105537contigM-pyrifera_M_contig105537:2..634 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score360.5
Seed ortholog evalue5.2e-97
Seed eggNOG ortholog1122164.JHWF01000006_gene318
Preferred namesucD
KEGG rclassRC00004,RC00014
KEGG koko:K01902
KEGG ReactionR00405,R02404
KEGG Pathwayko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011,M00173,M00374,M00620
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009361,GO:0009987,GO:0016310,GO:0019538,GO:0032991,GO:0036211,GO:0042709,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0046777,GO:0071704,GO:1901564,GO:1902494
EggNOG free text desc.Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
EggNOG OGs1JCAJ@118969,1MUGA@1224,1RM7Y@1236,COG0074@1,COG0074@2
EC6.2.1.5
COG Functional cat.C
BiGG ReactioniE2348C_1286.E2348C_0608
Best tax levelLegionellales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size633
Cds size633
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815563.715702-CDS-M-pyrifera_M_contig105537:1..6341622815563.715702-CDS-M-pyrifera_M_contig105537:1..634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105537 2..634 -
1692277465.7562692-CDS-M-pyrifera_M_contig105537:1..6341692277465.7562692-CDS-M-pyrifera_M_contig105537:1..634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105537 2..634 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105537.1188.1prot_M-pyrifera_M_contig105537.1188.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105537 2..634 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105537.1188.1

>prot_M-pyrifera_M_contig105537.1188.1 ID=prot_M-pyrifera_M_contig105537.1188.1|Name=mRNA_M-pyrifera_M_contig105537.1188.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp
IYVPAPFCKDSIIEAVDAGIELIVCITEGIPAFDMLEVKACLEWNSNARL
IGPNCPGVITPGACKIGIMPGHIHQPGKVGIVSRSGTLTYEAVNQTTALG
FGQSTCVGIGGDPIPGTNFIDVLALFEKDPQTEAIVMVGEIGGSAEEEAA
EFIKHNVSKPVVSYIAGVTAPEGKRMGHAGAIIAGGKGTAKEKFAALEAA
GVHTVSSPAAI
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mRNA from alignment at M-pyrifera_M_contig105537:2..634-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105537.1188.1 ID=mRNA_M-pyrifera_M_contig105537.1188.1|Name=mRNA_M-pyrifera_M_contig105537.1188.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig105537:2..634- (Macrocystis pyrifera P11B4 male)
ATTTATGTACCAGCACCATTCTGCAAAGATTCAATTATCGAAGCGGTGGA
CGCCGGTATTGAACTGATTGTGTGTATTACGGAAGGGATTCCAGCGTTTG
ATATGCTTGAAGTGAAAGCATGTTTAGAGTGGAATTCTAATGCGCGTTTG
ATCGGACCAAACTGCCCAGGTGTCATTACACCTGGCGCTTGTAAAATTGG
TATTATGCCTGGCCACATTCATCAACCGGGTAAAGTTGGAATTGTTTCTC
GTTCAGGTACGTTAACCTATGAAGCAGTCAACCAAACAACTGCGCTTGGC
TTTGGTCAAAGTACGTGTGTTGGTATTGGTGGTGATCCAATTCCTGGCAC
AAATTTCATTGACGTTTTAGCGTTATTTGAAAAAGATCCACAGACTGAAG
CAATTGTGATGGTCGGTGAAATTGGTGGCTCCGCTGAAGAAGAAGCAGCA
GAATTCATCAAGCACAATGTTAGCAAACCGGTTGTTTCTTATATTGCAGG
AGTTACGGCTCCTGAAGGTAAACGCATGGGCCATGCCGGTGCGATTATTG
CTGGTGGTAAAGGAACTGCAAAAGAAAAATTTGCCGCACTTGAAGCTGCA
GGTGTTCATACTGTAAGTTCACCAGCTGCAATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105537:2..634-

>mRNA_M-pyrifera_M_contig105537.1188.1 ID=mRNA_M-pyrifera_M_contig105537.1188.1|Name=mRNA_M-pyrifera_M_contig105537.1188.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig105537:2..634- (Macrocystis pyrifera P11B4 male)
ATTTATGTACCAGCACCATTCTGCAAAGATTCAATTATCGAAGCGGTGGA
CGCCGGTATTGAACTGATTGTGTGTATTACGGAAGGGATTCCAGCGTTTG
ATATGCTTGAAGTGAAAGCATGTTTAGAGTGGAATTCTAATGCGCGTTTG
ATCGGACCAAACTGCCCAGGTGTCATTACACCTGGCGCTTGTAAAATTGG
TATTATGCCTGGCCACATTCATCAACCGGGTAAAGTTGGAATTGTTTCTC
GTTCAGGTACGTTAACCTATGAAGCAGTCAACCAAACAACTGCGCTTGGC
TTTGGTCAAAGTACGTGTGTTGGTATTGGTGGTGATCCAATTCCTGGCAC
AAATTTCATTGACGTTTTAGCGTTATTTGAAAAAGATCCACAGACTGAAG
CAATTGTGATGGTCGGTGAAATTGGTGGCTCCGCTGAAGAAGAAGCAGCA
GAATTCATCAAGCACAATGTTAGCAAACCGGTTGTTTCTTATATTGCAGG
AGTTACGGCTCCTGAAGGTAAACGCATGGGCCATGCCGGTGCGATTATTG
CTGGTGGTAAAGGAACTGCAAAAGAAAAATTTGCCGCACTTGAAGCTGCA
GGTGTTCATACTGTAAGTTCACCAGCTGCAATTATTTATGTACCAGCACC
ATTCTGCAAAGATTCAATTATCGAAGCGGTGGACGCCGGTATTGAACTGA
TTGTGTGTATTACGGAAGGGATTCCAGCGTTTGATATGCTTGAAGTGAAA
GCATGTTTAGAGTGGAATTCTAATGCGCGTTTGATCGGACCAAACTGCCC
AGGTGTCATTACACCTGGCGCTTGTAAAATTGGTATTATGCCTGGCCACA
TTCATCAACCGGGTAAAGTTGGAATTGTTTCTCGTTCAGGTACGTTAACC
TATGAAGCAGTCAACCAAACAACTGCGCTTGGCTTTGGTCAAAGTACGTG
TGTTGGTATTGGTGGTGATCCAATTCCTGGCACAAATTTCATTGACGTTT
TAGCGTTATTTGAAAAAGATCCACAGACTGAAGCAATTGTGATGGTCGGT
GAAATTGGTGGCTCCGCTGAAGAAGAAGCAGCAGAATTCATCAAGCACAA
TGTTAGCAAACCGGTTGTTTCTTATATTGCAGGAGTTACGGCTCCTGAAG
GTAAACGCATGGGCCATGCCGGTGCGATTATTGCTGGTGGTAAAGGAACT
GCAAAAGAAAAATTTGCCGCACTTGAAGCTGCAGGTGTTCATACTGTAAG
TTCACCAGCTGCAATT
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