mRNA_M-pyrifera_M_contig1054.1155.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1054.1155.1
Unique NamemRNA_M-pyrifera_M_contig1054.1155.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: D7FMX7_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX7_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 2.100e-137
Identity = 279/572 (48.78%), Postives = 359/572 (62.76%), Query Frame = 1 
Query:    1 DEESIGQLATAASRCDHIDRFLLRAARAREEAAEKQGARKRG---GSGGRWEGTTGN-GQQRTSRRSGDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIEVLPDAIGRALNDYPGLAGSHTLAFDGLVQAGKLRRSRPVLPPDSQM-RARQSSPRENGGDTLPLGCTIVNRNGILDDANTNSKSVLTTHKVIRSSDARTG-GTDTPTTDTXXXXXXXXXXXXXXXXXXXADNLNPADSAGLRPSSADALAATPSAPSQRRSFGDEQAGGDMPPAAPRPSASNPHSASAADVAVSAAPTGA----------------IDTGDIPSGMAATPAPARLKAPARREPMSGPRQKDGSTTTTTAVSARLVDAATPGELTRVLYNPGPTFRRARGRKKKTLLDASRVTADDIAGSEKVLALVADTTLQQASLKNYLRAVLAIQHGCVRGSIPVSRPTGGNPSKEALAMTRKAASIRGS-GEKGTTGRAALSMCSAHELASHIVVLLDAREK 1647
            D+ESIG+LATAASRCDHI RFLLRAARAREE A K+ ARK G   G GGRWEGTTG   +Q T+  S D+LEMMTMHQAKGREFK+VFLTGWDEGSFPLLP++ D +H +ESLER+ EERRLGYVALTRAS+N IITFSKKRRF ++W++S+GPSRFLL+MPTE++EV PDAIGR LNDYPG AG+H LAF G+++AGKLRRSRPVL   S++ +  + +PR   GD LP GCTI+NRN  L  A  +S  V   HK   +SD      +D                           + + AD +      ++     P++    R   DE      PP +   S +   + S+A+  + +  +G                 +DT  +       P  A +      EP S  R +            +  + A P + + + YNPGPTFR++RGR++K LLD S +TA+++ G++++LAL+ D++LQQASLKNYLRAVLAIQHGCVRGSIPV RP GG  + +  A T   A++RG   E   TGRAALS CSA +L ++IV LLDAR K
Sbjct:  763 DQESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIGRTLNDYPGFAGTHRLAFHGMIEAGKLRRSRPVLMSASEIAKNEEDTPR---GDDLPSGCTILNRNPAL--ALASSDFVKPHHKSAEASDLDAAKASDGKGNSLLEAARRAVGEVGGSASKGTTPSSSVADDSAGAAGQSETSTIPPTSALNGRPTRDES----PPPRSGSKSNALEMAWSSAEAFLRSIASGGGPGEKKTERSGRKESRVDTAKVAGTQPEAPGMAPVPFGRAGEPSSPGRPQH----------RQAGEGAAP-KASPLRYNPGPTFRKSRGRRRKALLDPSGITAEEVVGADELLALLGDSSLQQASLKNYLRAVLAIQHGCVRGSIPVWRPDGGKKAAKGAASTSGKAALRGGLAESEATGRAALSTCSAQDLTNYIVTLLDARNK 1314
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BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: A0A6H5JQI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI7_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.410e-35
Identity = 128/377 (33.95%), Postives = 197/377 (52.25%), Query Frame = 1 
Query:  568 LVQAGKLRRSRPVLPPDSQM-RARQSSPRENGGDTLPLGCTIVNRNGIL-----DDANTNSKSVLTTH-KVIRSSDARTGGTDTPTTDTXXXXXXXXXXXXXXXXXXXADNLNPADSAGLRPSSADALAATPSAPSQRRSFGDEQAGGDMPPAAPRPSASNPHSASAADVAVSAAPTGAIDTGDIPSGMAATP---------APARLKAPARREPMSGPRQKDGSTTTTTAVSARLVDAATPGELTRVLYNPGPTFRRARGRKKKTLLDASRVTADDIAGSEKVLALVADTTLQQASLKNYLRAVLAIQHGCVRGSIPVSRPTGGNPSKEALAMTRKAASIRGS-GEKGTTGRAALSMCSAHELASHIVVLLDAREK 1647
            +++AGKLRRSRPVL   S++ +  + +PR   GD LP GCTI+NRN  L     D    + KS   +  +V+++SD + G +                          +D+ +P  +  L  S+    +A    P++  S          PP +   S +   + S+A+  + +  +G    G+  +G +            A  + +AP +  P      + G +++      R        + + + YNPGPTFR++RGR++K LLD S +TA+ + G++++LAL+ D++LQQASLKNYLRA+LAIQ+GCVRGSIPV RP  G  + +    T   A++RG   E   TGRAALS CSA +L S+I+ L DAR K
Sbjct:    1 MIEAGKLRRSRPVLMSASEIAKNEEDTPR---GDDLPSGCTILNRNPSLTLASSDFVKPHQKSTKASDLEVVKASDGK-GNSLLEAARRGVGEVGGSAAKETTPSSSVSDD-SPGAAGQLETSTIPPTSAPNGRPTRDES---------PPPKSGSKSNALEMAWSSAEAFLRSIASGG-GPGEKKAGRSGRRESHVDTVKVAGTQTEAPGKPVPFG----RAGESSSPGRPQHRQAGGGAAPKASPLRYNPGPTFRKSRGRRRKALLDPSGITAEKVVGADELLALLRDSSLQQASLKNYLRAILAIQYGCVRGSIPVWRPVDGKKATKGADSTSDEAALRGGLAESEATGRAALSTCSAQDLTSYIITLHDARTK 358
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BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: UPI0019BCE54F (ATP-binding domain-containing protein n=1 Tax=Pelagibacterales bacterium SAG-MED37 TaxID=2760038 RepID=UPI0019BCE54F)

HSP 1 Score: 93.6 bits (231), Expect = 2.670e-18
Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = 1 
Query:  190 GDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIE 489
            G+ + MMTMH AKG EF++VFL GW+EG FP   S +++         L EERRL YV LTRA + AII+FS  R ++  W++S   SRF+ ++P +++E
Sbjct:   65 GEKINMMTMHAAKGLEFEVVFLPGWEEGLFPHQKSIEEKGQS-----GLEEERRLAYVGLTRAKKKAIISFSMNRFYQGDWIDSMA-SRFIDELPEKYLE 158
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BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: A0A1F2Z731_9PROT (DNA helicase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2Z731_9PROT)

HSP 1 Score: 95.9 bits (237), Expect = 4.530e-17
Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = 1 
Query:  175 TSRRSGDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIEVLPDAI 507
            TS  S +S+ +MTMH AKG EF +VFLTGW+EG FP       R  +  S + + EERRL YVALTRA +N  +TF+  RR    W ++  PSRF+ ++P E I  L  ++
Sbjct:  539 TSNASENSVTLMTMHAAKGLEFSVVFLTGWEEGIFP-----SQRTLLEGSDKEIEEERRLAYVALTRAKKNVYVTFASNRRVHGQWQHNL-PSRFIKELPPEHICFLDTSV 643
[Close]
BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: A0A1Z9UMJ0_9PROT (DNA helicase n=1 Tax=Pelagibacteraceae bacterium TMED287 TaxID=1986829 RepID=A0A1Z9UMJ0_9PROT)

HSP 1 Score: 95.1 bits (235), Expect = 7.610e-17
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 1 
Query:  190 GDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIEVLPDAIGRALNDY 528
            G+ + +MTMH AKG EF +VFL GW+EG FP   S +++         L EERRL YV +TRA + A I+F+ KR F   W+++  PSRF+ ++P E +E   + + R  +D+
Sbjct:  544 GEKINLMTMHAAKGLEFDVVFLPGWEEGLFPHQKSLEEKGDFA-----LEEERRLAYVGITRAKKEAFISFAIKRAFHGDWMDTL-PSRFINEIPEEILEKSENDVQRNRDDF 650
[Close]
BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: A0A077AV06_9PROT (DNA helicase n=1 Tax=Candidatus Paracaedibacter acanthamoebae TaxID=91604 RepID=A0A077AV06_9PROT)

HSP 1 Score: 95.1 bits (235), Expect = 8.130e-17
Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 1 
Query:  175 TSRRSGDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIEVLPDAIGRALNDYPGLAGSH 549
            TS  + D + +MT+H AKG EF+ VFL GW+E  FP   + D+       LE L EERRL YV +TRA Q AIIT++  R+    W  S+ PSRF+ ++P E + ++  +   AL+    L+G H
Sbjct:  541 TSTVNNDMVNLMTLHAAKGLEFETVFLPGWEESIFPNARALDEN-----GLEGLEEERRLAYVGITRARQQAIITYAHNRKTFQGWQYST-PSRFIGELPKEHVHLIQASGSEALHGTRTLSGQH 659
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BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: A0A1W6BEI1_9PROT (DNA helicase n=1 Tax=Candidatus Pelagibacter sp. RS39 TaxID=1977864 RepID=A0A1W6BEI1_9PROT)

HSP 1 Score: 94.7 bits (234), Expect = 1.000e-16
Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 1 
Query:  190 GDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIE 489
            G+ + MMTMH AKG EF +VFL GW+EG FP   S +++ H       L EERRL YV +TRA +NAII+FS  R ++  W++S   SRF+ ++P   +E
Sbjct:  544 GEKINMMTMHAAKGLEFDVVFLPGWEEGLFPHQKSIEEKGH-----NGLEEERRLAYVGITRAKRNAIISFSMNRFYQGDWIDSMA-SRFIDELPENNLE 637
[Close]
BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: UPI001995CB92 (ATP-binding domain-containing protein n=1 Tax=Pelagibacterales bacterium SAG-MED39 TaxID=2760040 RepID=UPI001995CB92)

HSP 1 Score: 88.2 bits (217), Expect = 1.170e-16
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  190 GDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIE 489
            G  + MMTMH AKG EF +VFL GW+EG FP   S +++         L EERRL YV +TRA + A I+FS  R ++  W++S   SRF+ ++P +++E
Sbjct:   42 GQKINMMTMHAAKGLEFDVVFLPGWEEGLFPHQKSIEEKGQ-----NGLEEERRLAYVGITRAKKLAAISFSMNRFYQGDWIDSMA-SRFIDELPDKYLE 135
[Close]
BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: A0A5C5S9A4_9HYPH (DNA helicase (Fragment) n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5S9A4_9HYPH)

HSP 1 Score: 94.7 bits (234), Expect = 1.180e-16
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 1 
Query:  187 SGDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIEVLPDA 504
            +GD + +MTMH AKG EF  VFL GW+EG FP   + DD+      L  L EERRL YVALTRA +N  ++F+  RR  N W  ++ PSRF+ ++P + +E   DA
Sbjct:  630 NGDMVTIMTMHAAKGLEFDTVFLPGWEEGLFPNQRALDDK-----GLSGLEEERRLAYVALTRARKNVHVSFAANRRVFNQW-QAAIPSRFIGELPQDHLEASSDA 729
[Close]
BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Match: A0A424RX02_9PROT (DNA helicase (Fragment) n=1 Tax=Candidatus Pelagibacter sp. TMED239 TaxID=1986816 RepID=A0A424RX02_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 1.630e-16
Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = 1 
Query:  190 GDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTDDRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGPSRFLLDMPTEFIE 489
            G+ + MMTMH AKG EF +VFL GW+EG FP   S +++       + L EERRL YV +TRA +NAII+FS  R ++  W++S   SRF+ ++P + +E
Sbjct:  398 GEKINMMTMHAAKGLEFDVVFLPGWEEGLFPHQKSIEEKGQ-----KGLEEERRLAYVGITRAKKNAIISFSMNRFYQGDWIDSMA-SRFIEELPEKHLE 491
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1054.1155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMX7_ECTSI2.100e-13748.78DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JQI7_9PHAE3.410e-3533.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0019BCE54F2.670e-1846.00ATP-binding domain-containing protein n=1 Tax=Pela... [more]
A0A1F2Z731_9PROT4.530e-1745.95DNA helicase n=2 Tax=Alphaproteobacteria TaxID=282... [more]
A0A1Z9UMJ0_9PROT7.610e-1741.59DNA helicase n=1 Tax=Pelagibacteraceae bacterium T... [more]
A0A077AV06_9PROT8.130e-1741.60DNA helicase n=1 Tax=Candidatus Paracaedibacter ac... [more]
A0A1W6BEI1_9PROT1.000e-1647.00DNA helicase n=1 Tax=Candidatus Pelagibacter sp. R... [more]
UPI001995CB921.170e-1644.00ATP-binding domain-containing protein n=1 Tax=Pela... [more]
A0A5C5S9A4_9HYPH1.180e-1647.17DNA helicase (Fragment) n=1 Tax=Reyranella sp. CPC... [more]
A0A424RX02_9PROT1.630e-1646.00DNA helicase (Fragment) n=1 Tax=Candidatus Pelagib... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1054contigM-pyrifera_M_contig1054:1212..7978 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.9
Seed ortholog evalue1.7e-123
Seed eggNOG ortholog2880.D7FMX7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATP-dependent DNA helicase activity
EggNOG OGsCOG0210@1,KOG2108@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1653
Cds size1653
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815561.9850981-CDS-M-pyrifera_M_contig1054:1211..12971622815561.9850981-CDS-M-pyrifera_M_contig1054:1211..1297Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 1212..1297 +
1692277464.805456-CDS-M-pyrifera_M_contig1054:1211..12971692277464.805456-CDS-M-pyrifera_M_contig1054:1211..1297Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 1212..1297 +
1622815561.9990113-CDS-M-pyrifera_M_contig1054:2352..24701622815561.9990113-CDS-M-pyrifera_M_contig1054:2352..2470Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 2353..2470 +
1692277464.8166807-CDS-M-pyrifera_M_contig1054:2352..24701692277464.8166807-CDS-M-pyrifera_M_contig1054:2352..2470Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 2353..2470 +
1622815562.0121987-CDS-M-pyrifera_M_contig1054:2845..29001622815562.0121987-CDS-M-pyrifera_M_contig1054:2845..2900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 2846..2900 +
1692277464.8307252-CDS-M-pyrifera_M_contig1054:2845..29001692277464.8307252-CDS-M-pyrifera_M_contig1054:2845..2900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 2846..2900 +
1622815562.0272734-CDS-M-pyrifera_M_contig1054:3730..37941622815562.0272734-CDS-M-pyrifera_M_contig1054:3730..3794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 3731..3794 +
1692277464.8424885-CDS-M-pyrifera_M_contig1054:3730..37941692277464.8424885-CDS-M-pyrifera_M_contig1054:3730..3794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 3731..3794 +
1622815562.0369823-CDS-M-pyrifera_M_contig1054:4377..45091622815562.0369823-CDS-M-pyrifera_M_contig1054:4377..4509Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 4378..4509 +
1692277464.8591695-CDS-M-pyrifera_M_contig1054:4377..45091692277464.8591695-CDS-M-pyrifera_M_contig1054:4377..4509Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 4378..4509 +
1622815562.0464232-CDS-M-pyrifera_M_contig1054:5674..57841622815562.0464232-CDS-M-pyrifera_M_contig1054:5674..5784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 5675..5784 +
1692277464.8727589-CDS-M-pyrifera_M_contig1054:5674..57841692277464.8727589-CDS-M-pyrifera_M_contig1054:5674..5784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 5675..5784 +
1622815562.0559595-CDS-M-pyrifera_M_contig1054:6219..70581622815562.0559595-CDS-M-pyrifera_M_contig1054:6219..7058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 6220..7058 +
1692277464.9262729-CDS-M-pyrifera_M_contig1054:6219..70581692277464.9262729-CDS-M-pyrifera_M_contig1054:6219..7058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 6220..7058 +
1622815562.067412-CDS-M-pyrifera_M_contig1054:7483..76681622815562.067412-CDS-M-pyrifera_M_contig1054:7483..7668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 7484..7668 +
1692277464.934969-CDS-M-pyrifera_M_contig1054:7483..76681692277464.934969-CDS-M-pyrifera_M_contig1054:7483..7668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 7484..7668 +
1622815562.0834274-CDS-M-pyrifera_M_contig1054:7914..79781622815562.0834274-CDS-M-pyrifera_M_contig1054:7914..7978Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 7915..7978 +
1692277464.949015-CDS-M-pyrifera_M_contig1054:7914..79781692277464.949015-CDS-M-pyrifera_M_contig1054:7914..7978Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1054 7915..7978 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1054.1155.1prot_M-pyrifera_M_contig1054.1155.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1054 1212..7978 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1054.1155.1

>prot_M-pyrifera_M_contig1054.1155.1 ID=prot_M-pyrifera_M_contig1054.1155.1|Name=mRNA_M-pyrifera_M_contig1054.1155.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=551bp
DEESIGQLATAASRCDHIDRFLLRAARAREEAAEKQGARKRGGSGGRWEG
TTGNGQQRTSRRSGDSLEMMTMHQAKGREFKIVFLTGWDEGSFPLLPSTD
DRDHVIESLERLHEERRLGYVALTRASQNAIITFSKKRRFRNSWVNSSGP
SRFLLDMPTEFIEVLPDAIGRALNDYPGLAGSHTLAFDGLVQAGKLRRSR
PVLPPDSQMRARQSSPRENGGDTLPLGCTIVNRNGILDDANTNSKSVLTT
HKVIRSSDARTGGTDTPTTDTTLAATAAAAAAVVTAAAAAADNLNPADSA
GLRPSSADALAATPSAPSQRRSFGDEQAGGDMPPAAPRPSASNPHSASAA
DVAVSAAPTGAIDTGDIPSGMAATPAPARLKAPARREPMSGPRQKDGSTT
TTTAVSARLVDAATPGELTRVLYNPGPTFRRARGRKKKTLLDASRVTADD
IAGSEKVLALVADTTLQQASLKNYLRAVLAIQHGCVRGSIPVSRPTGGNP
SKEALAMTRKAASIRGSGEKGTTGRAALSMCSAHELASHIVVLLDAREKE
*
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mRNA from alignment at M-pyrifera_M_contig1054:1212..7978+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1054.1155.1 ID=mRNA_M-pyrifera_M_contig1054.1155.1|Name=mRNA_M-pyrifera_M_contig1054.1155.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6767bp|location=Sequence derived from alignment at M-pyrifera_M_contig1054:1212..7978+ (Macrocystis pyrifera P11B4 male)
GACGAGGAGAGCATCGGTCAACTGGCAACAGCGGCGTCAAGATGCGACCA
CATAGACCGGTTTTTGCTGCGGGCCGCCCGAGCGAGGTGAGGGAGGCACT
TTTTTGCCGTGAGAACGAGGGCGTGAAACGGACCGTCTTACAACACCCGC
TGCTTACGCTCGACACGGAACGCTACCTGATTATCGTGCTCGATGTTGAG
ACGAGCTGTGGTCGGCGGTTCGCTCAGGTTTTTATTCTGGCCCTGGCCTG
AATGGTCATCATCATGTTTTATCATAGAGCGGAGTGGTTGATCGCGCCTG
TCATGGCATGAATTATGGTGTTTTCAGGGTGTTTGTGGTCGTCAGGGGAT
ATCATGGGTAATTCGAAGGGTTTTCTATTTGAATATGGATAATATGGCGG
GTAGAAACGATTGTTCTGCTTGCTGCTGTAGAACATCGTGCACAGCAGTC
ACTCTCCAACACAGCTACGATGCTTATCAACTACCGCCTGTCTCATGAGT
GCGTCACCCGGGTGATCATCCTACCGCGTGGCCACCTAGACCATATGCCT
CGCTTGTGGTGGCGCCTACCATGGAGACTGTGTGCCTGGCCTTGCATATG
CCAAGGCGATCGATCGAACGGTTCGCCCTTCCAAGCGCGTTGCTGTGCAG
TACCCCTAGCACAGCACCAGTGTGGATGGCGCTCACTGGCGCGCTTCAAA
TCGGCCTGTGCTGCAACGAACCTCTGTTTCTGCGATCCAGATTAGGAGTT
CGTACTTGATTCCTCGCGCGGCATCGATCAAAATATCTACAAGCGGGGAA
AATGTCCGAGTCTCAAAACGTGCCGCTCCGACCAACCAATGGCCGTCCCC
CGCGGTAGTGACCGCTATACCGGTCGAGGCGGCCGCAAGACCTGTAACGT
TCCTCGGAACGTCTGTACTGTTGCGCTTGCCACCATGAAAGTATCTTGGT
GACCGCTATATACCGGTCGAGGCGGCCGCATGGTCTGTAACGTTCCTCGA
AACGTCTGTACTGTTGCGCTTGCCACCATGAAAGTATGTTGTTCGCCGAC
ACGTTCACAACTATATATAGCGTATGGGGTACCAACTATGTACCGGTATT
AAGTGTTTCTTTCCTTCGTTTTGCTCGTCCCTCCTGCACAGAGAGGAGGC
CGCAGAAAAACAAGGGGCGAGGAAGCGCGGCGGATCAGGGGGAAGGTGGG
AGGGGACGACGGGGAACGGGCAACAGCGCACCTCTCGGCGCTCTGGAGAT
TCTCTCGAGGTGCGGGAATGGCATTTGGGTGTATTCTTGCCTTGCATGGT
CACGACCGAGACGGTATTGCGACGTTGCACACACTCCCATTTCATGATGA
CGCGGCGATTCCAGTGATATGTTTGTAATGGGGAACCTGAGTGCTATTAA
TAGATCAAACTAAGAGATTTTTCGTGCGCCACCTCAGACGTGGTGTTGCC
GCTGTTACTTAGTAGTGCGGTGGATGGGATGTTGTTTTATTTACTGCTTT
GCTCGAGGTCTCGTAGCCTCCGGTCTGAAATTGGTCGTTCTTTGAGGAAA
AGGGGCTGGTACAAGGCAAGTGACTAATTTCGCCTCTACTCCTGCTGGTC
TACCTGTCTTCGTGTGCCTCTTGTCCTGCACCAGATGATGACCATGCACC
AGGCGAAGGGCAGAGAATTCAAGATTGTTTTTCTTACAGGTGCCGGCGTA
AAAAAAATCAGGGTCTTGCTGCGTTGTTCTTGCAGTCCCAGGAAGTAGTA
GCGGTCAGCGCAGCTGTCAGGAGGCTGTTTACACCCTTCGAGTACGCCGA
ACGCGCCTAGCAAAGGACGCGGCAGCTTACCTGGCGTCGTATTTCTTGGG
CAGAGCTATTAACACACCTGATACAGTGACCCTTGGGCAGAGCTGCTATC
CCCTCTGGGGCGCCGACATAGCGGCCAACACAACGCTAAATTTCGTGTTA
CCAACCGTCTACGAGCAACTCGAAGGCCGAGAAGTACGGATAGGATCATG
TTGCGCCCGGGCCGTACGACTCCTTGCATTCAATCTTTATAGCTCCGACA
CCATTTCGTATCACCCCCCCATTACGCAGCTGCCGTTGCTGGAATCGTCA
CTTTTTGTCGACAACTTTCCCCTCAGGTATCCCTATTCACCTATTTATTA
TGCGCTTGTTTCGCGTCGCCTTGAGGGCGTTGCCTACACTCCTCACTCGA
TATTCATAGGAACCGTTCGGTTAGGGGTAGCTAGCAGGACTACACTGTAT
GACTCAAGATTGCTTCCGTATGGTAAGCGTTGCTGGGTCGTTGTCCTTCG
GACCGTGTTGGCACTGCAGTACATCCGTGCATTCCCAGGACTGATGTTCC
CGTTCCCGTGCGAATATCGTTCTCGTGGGCCCACCCAAACAGTCCCGGTG
GAAATCTTTATCACTTTTGGTTCCCGTGGAAACCCTGATTTCCCATTTCC
CATCCTCACGACAACCAACAACCACCACATGAGTATTGCGGTCGATTGTC
TCTTTTCGTTTGTGTCAAGGTTGGGATGAAGGGAGTTTCCCGCTTCTGCC
GAGCACCGACGACAGGGACCACGTCATCGAAAGGTGGGTTATTGTTCAAG
ACGAAAGCAAGCACTAGCGCTGTGTGTGAGTTGGCTGACTAAGAGTCGCC
GACTAGTCATTAGTTGGTAAGGTATCCCTGCCGGTTGCCTTCGGTAATTT
GCGGAGTTCTGCGTCTTTGCATCTGACCGGGTCGTTTTTTTTTCTCGTTT
GTGGCCCAACGTGTCTGTTGGTTTTGTTTGTTTTGAAGAGTAATTGAGTT
TGTTGGCTTATATCGTTGTTCAACTAATAACTACTTGGCATCCTTAAGTG
CATTAGTAAGCCGACTCACAGCCCTAGCGGACACCGTATAGCTAAAGTAC
GTACTGTAAAATGTGGCTGACTTTATCGATGGTGCAGCTCAACGCATCCG
GGCAGACCGGCCGTAGCTTGTGAAAAAAAAGCGGTTCGCTTGTCCACGCG
AGCACGCAGGAAGAGCCGCGTTTTCGGCCACCTGGCCTTGCTGCCGTAAG
CCAGAGCCGGGAAGATTGAAGTACACACAAGATGCCCGGCTAACTCCACG
CCCCGTCTCTTTTCCCGCGTATGTGTTGGGTACGTTTGTGTGTGTTTGTT
TATTCTCTTCTGTCAGCCTCGAGCGACTGCACGAGGAGCGAAGGCTAGGG
TACGTGGCTCTGACCCGCGCCAGCCAGAACGCCATCATCACGTTCTCCAA
GAAACGACGGTTCCGGAACTCGTGGGTTAATTCTTCGGGGCCATCCAGGT
ATCAAGCACTCCCATGCTAAAGGTGCTGACAATATCAAGCAACCATTTAC
AAGTAGCTTTTTTCGGGGTTGGTGTTGGTTCGAAGGAACTGCCTATAAGT
AATACTTGATTCACGCGACTGAAGAGGTAACAAGTGGTCCTCTCGAAAAA
TGTTGACGATGTCAAGCAATCGTTTTGGGGTAGTTATTTTTGGGGTGGTG
TTGACGTGTGCTGCGGTGAATGGGTAGTAGCGTCTAATTTTTCTGAGGCT
CCTGACTTGATTATAGTGTAGGAGCTCTATACCTCACCCACTAAACTCAT
TTTGAGAAAGGTCGTATTAATAGTGCATCCCGATGAATATTCCCAAAGCC
TAATACTCGTAGGTATGTCACGAGAAACACTTTTAAACGCTACTGCGCTA
TTGTTATTCCAACGATTTTGGGTTAAGAAACCTATTATGACGGGATACCA
TAGTAAATAGGACCAAATATTGTCAGTGAAAATAAGGAAATATATAGGTT
TTTGTCTGTACCGTAGGTCCTATTTACTATGGTCCCCCGTAATAGTAGCC
AGTCGAAAATATTGAGCCGAAAATGGCTACCCCTATCGTATCACGTGTTT
AGCGCTTACGGTAGAAGTAACTATCTATTGAACTATAGCTCAACATGTAG
TTCCTTCCAAAGAACAAACACTTCAAACATTGAGAAGAAATTCGTAGCGA
AAACAAGGACGGACCGGTGTTTAATTATCAGGATACTGAGTTTATGTGGC
GATAGGCCTTGTCGGTATCCCCGACTTCACAATTCTCTCAACATGTACTC
ACAACGCAAGCTTTTTGGTATTGTACGCTTTTTGTTTACGGAGAGAAATA
AGCGGCATGAAGCCGCTGTCGGAGTGGGGCCCTTTTGCCCACCCATGAAA
ACTGCAAGAGCGCGAGCTAGCAAAATTCGATGCAAATCTACGAGCCGTGG
GAATGCTGAACCTTATAAAAATGAAGGCAAGCACCGGGGGGGGGAGAAGG
GACGACACCTGTGATCGTGGCTTGTTCCGAAGGCCGCAGAGCGCAAACCT
CCTGCATATGGACGAGTTGGGCTGAATAACACGTGCACTACAAGAACAAA
ATAATGGAGATTAAAATCTGTGATTGATACTCTCATTCTACTGCGGGTGC
CACAACGCCTCAGATTTTTGCTGGACATGCCAACGGAGTTCATCGAGGTC
CTGCCAGATGCCATAGGACGCGCCCTTAATGACTACCCAGGATTGGCGGG
AAGTCACACCCTGGCGTTTGATGGTAAGGGTCATATTTATCGTGTAAGCC
CGGCAAGTACCTACGATACAAACCCACACAAGATCAACAGCCATCACATG
ATATGTTGCGATTGAGCTTAATGTTATCGATGTGGCCTTATCGCTGCGTA
GGAGGGCGCCTGAAAGACAATTTCGTTCCTCGTACTGTGATTCCATGACT
ATCATTTCCATTCAGGAGCCCTTTGGGCGTGCCTGGTCTTGAAGGCAAAG
CTCGCCCGCCACCCACCATGATGTTCAATGCATGGCGCTGCCGTAGTTGC
TACCTCTTCAATCGCTCTGCACTCCTTTCACCAAATGTCTGATACGCCTG
GTGCTTTTGTTGAGGGCTTTTGATGCATGTAGTACGTGAGCATGAGAACC
CCTAACCCCATGTTACTGCCCTCCCCCTTGCCCTCACCCACCTTCGTTCC
TCGCAAAGGCTTGGTTCAGGCCGGCAAGCTTCGCCGGAGTCGTCCTGTTC
TCCCCCCCGATTCACAAATGCGCGCGCGCCAATCGTCTCCGCGAGAAAAT
GGTGGCGACACCCTGCCCCTTGGATGCACCATCGTCAACCGCAACGGCAT
TCTCGACGATGCCAACACCAACTCAAAATCCGTGCTCACTACCCATAAAG
TCATACGTAGCTCTGATGCCAGGACCGGGGGCACTGACACACCTACCACG
GATACGACTTTAGCTGCTACTGCTGCGGCTGCTGCCGCTGTTGTTACTGC
CGCTGCGGCTGCTGCTGACAATTTGAACCCCGCAGACTCCGCGGGATTAC
GGCCATCGTCTGCTGATGCGCTTGCTGCAACCCCTTCAGCACCGTCGCAA
CGACGTTCGTTTGGCGACGAGCAAGCCGGTGGCGATATGCCACCGGCTGC
GCCGCGGCCGAGTGCGTCGAATCCACACTCGGCCTCCGCTGCAGATGTAG
CAGTCTCGGCCGCTCCCACCGGCGCCATCGACACAGGGGATATTCCCAGC
GGGATGGCAGCGACGCCAGCTCCTGCACGGTTGAAAGCGCCTGCAAGACG
CGAGCCAATGTCCGGTCCACGCCAAAAGGATGGGTCGACGACAACAACGA
CGGCGGTGTCTGCGCGATTGGTTGATGCTGCGACTCCGGGGGAACTAACC
CGGGTGCTGTATAACCCCGGCCCTACGTTCCGTCGCGCTCGAGGACGCAA
GAAAAAAACACTGTTGGACGCGTCCAGGGTCACCGCAGATGACATTGCTG
GGTCGGAGAAGGTCCTTGCGCTTGTGGCGGACACTACTCTCCAGCAGGTG
AGTTTGGTGGTGGGGTAACGCACGGTAGACGCTGGCGGGGCACGCCACAA
GCGTCGTCGGTCGCTTGTAGTCGGGGCACCGCGCATGCGTCGTGGGCCGC
TGCTGCAGCGGCAGAACTGCACCACCTTTTTTATATAGTATCCGGCAAAA
GACCGATTAGACTCGAAGACTGCAGGGATGGACCGGAGAGCGTATGTGCG
AACGCTATCGTAGATACTGGATGGTCACTCGGCGGGTGGAGTTTTTGTAG
CGGTGTCGTTCGCCTCTCTATACTGTTGGCAGGTTTGCCAAATTACACGT
CCCATCGAAGAAATGGCTTCCTCCGTTGTATCTTTAAGCTCGTTTAAGCT
CGTCATGTGCGTTGATGGTCTTCCGTTTATTGCTGTTTACCTCCGCAACG
GTTGGTGTGCTGCTGTTCACAGGCATCCCTAAAGAACTACCTGAGAGCGG
TTCTCGCTATTCAGCACGGGTGCGTTCGGGGCTCTATTCCAGTCTCGCGA
CCAACTGGTGGCAACCCGAGCAAGGAAGCACTAGCGATGACAAGAAAGGC
GGCTTCAATAAGGGGATCAGGAGAAAAGGGGACGACAGGGCGTGCGGCAT
TATCAATGTGAGTGTTATTCGATGTGGCCTTGAGAGAGCTGTCAATTGTT
CTACCGGCAGTAGCTCCCGCACCACTTGTAGAGCTAGCCGAGGTGCTGCC
TACATCAAATCCTGACACTTTCCTAGATTGATATCTTTTCGAAGAAAAAA
TTGAGCGTAAGCGTCTATAGTGATCACTAGAGTGACGTCAGCCGGGCCGT
GTGAACCTAAAAGTATTTCGCTGTGCACATTTTTATGATGTTACCATTTG
CAGGTGTTCTGCGCATGAGTTGGCGAGCCACATCGTCGTACTTCTGGACG
CGAGAGAGAAGGAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1054:1212..7978+

>mRNA_M-pyrifera_M_contig1054.1155.1 ID=mRNA_M-pyrifera_M_contig1054.1155.1|Name=mRNA_M-pyrifera_M_contig1054.1155.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3306bp|location=Sequence derived from alignment at M-pyrifera_M_contig1054:1212..7978+ (Macrocystis pyrifera P11B4 male)
GACGAGGAGAGCATCGGTCAACTGGCAACAGCGGCGTCAAGATGCGACCA
CATAGACCGGTTTTTGCTGCGGGCCGCCCGAGCGAGGACGAGGAGAGCAT
CGGTCAACTGGCAACAGCGGCGTCAAGATGCGACCACATAGACCGGTTTT
TGCTGCGGGCCGCCCGAGCGAGAGAGGAGGCCGCAGAAAAACAAGGGGCG
AGGAAGCGCGGCGGATCAGGGGGAAGGTGGGAGGGGACGACGGGGAACGG
GCAACAGCGCACCTCTCGGCGCTCTGGAGATTCTCTCGAGAGAGGAGGCC
GCAGAAAAACAAGGGGCGAGGAAGCGCGGCGGATCAGGGGGAAGGTGGGA
GGGGACGACGGGGAACGGGCAACAGCGCACCTCTCGGCGCTCTGGAGATT
CTCTCGAGATGATGACCATGCACCAGGCGAAGGGCAGAGAATTCAAGATT
GTTTTTCTTACAGATGATGACCATGCACCAGGCGAAGGGCAGAGAATTCA
AGATTGTTTTTCTTACAGGTTGGGATGAAGGGAGTTTCCCGCTTCTGCCG
AGCACCGACGACAGGGACCACGTCATCGAAAGGTTGGGATGAAGGGAGTT
TCCCGCTTCTGCCGAGCACCGACGACAGGGACCACGTCATCGAAAGCCTC
GAGCGACTGCACGAGGAGCGAAGGCTAGGGTACGTGGCTCTGACCCGCGC
CAGCCAGAACGCCATCATCACGTTCTCCAAGAAACGACGGTTCCGGAACT
CGTGGGTTAATTCTTCGGGGCCATCCAGCCTCGAGCGACTGCACGAGGAG
CGAAGGCTAGGGTACGTGGCTCTGACCCGCGCCAGCCAGAACGCCATCAT
CACGTTCTCCAAGAAACGACGGTTCCGGAACTCGTGGGTTAATTCTTCGG
GGCCATCCAGATTTTTGCTGGACATGCCAACGGAGTTCATCGAGGTCCTG
CCAGATGCCATAGGACGCGCCCTTAATGACTACCCAGGATTGGCGGGAAG
TCACACCCTGGCGTTTGATGATTTTTGCTGGACATGCCAACGGAGTTCAT
CGAGGTCCTGCCAGATGCCATAGGACGCGCCCTTAATGACTACCCAGGAT
TGGCGGGAAGTCACACCCTGGCGTTTGATGGCTTGGTTCAGGCCGGCAAG
CTTCGCCGGAGTCGTCCTGTTCTCCCCCCCGATTCACAAATGCGCGCGCG
CCAATCGTCTCCGCGAGAAAATGGTGGCGACACCCTGCCCCTTGGATGCA
CCATCGTCAACCGCAACGGCATTCTCGACGATGCCAACACCAACTCAAAA
TCCGTGCTCACTACCCATAAAGTCATACGTAGCTCTGATGCCAGGACCGG
GGGCACTGACACACCTACCACGGATACGACTTTAGCTGCTACTGCTGCGG
CTGCTGCCGCTGTTGTTACTGCCGCTGCGGCTGCTGCTGACAATTTGAAC
CCCGCAGACTCCGCGGGATTACGGCCATCGTCTGCTGATGCGCTTGCTGC
AACCCCTTCAGCACCGTCGCAACGACGTTCGTTTGGCGACGAGCAAGCCG
GTGGCGATATGCCACCGGCTGCGCCGCGGCCGAGTGCGTCGAATCCACAC
TCGGCCTCCGCTGCAGATGTAGCAGTCTCGGCCGCTCCCACCGGCGCCAT
CGACACAGGGGATATTCCCAGCGGGATGGCAGCGACGCCAGCTCCTGCAC
GGTTGAAAGCGCCTGCAAGACGCGAGCCAATGTCCGGTCCACGCCAAAAG
GATGGGTCGACGACAACAACGACGGCGGTGTCTGCGCGATTGGTTGATGC
TGCGACTCCGGGGGAACTAACCCGGGTGCTGTATAACCCCGGCCCTACGT
TCCGTCGCGCTCGAGGACGCAAGAAAAAAACACTGTTGGACGCGTCCAGG
GTCACCGCAGATGACATTGCTGGGTCGGAGAAGGTCCTTGCGCTTGTGGC
GGACACTACTCTCCAGCAGGCTTGGTTCAGGCCGGCAAGCTTCGCCGGAG
TCGTCCTGTTCTCCCCCCCGATTCACAAATGCGCGCGCGCCAATCGTCTC
CGCGAGAAAATGGTGGCGACACCCTGCCCCTTGGATGCACCATCGTCAAC
CGCAACGGCATTCTCGACGATGCCAACACCAACTCAAAATCCGTGCTCAC
TACCCATAAAGTCATACGTAGCTCTGATGCCAGGACCGGGGGCACTGACA
CACCTACCACGGATACGACTTTAGCTGCTACTGCTGCGGCTGCTGCCGCT
GTTGTTACTGCCGCTGCGGCTGCTGCTGACAATTTGAACCCCGCAGACTC
CGCGGGATTACGGCCATCGTCTGCTGATGCGCTTGCTGCAACCCCTTCAG
CACCGTCGCAACGACGTTCGTTTGGCGACGAGCAAGCCGGTGGCGATATG
CCACCGGCTGCGCCGCGGCCGAGTGCGTCGAATCCACACTCGGCCTCCGC
TGCAGATGTAGCAGTCTCGGCCGCTCCCACCGGCGCCATCGACACAGGGG
ATATTCCCAGCGGGATGGCAGCGACGCCAGCTCCTGCACGGTTGAAAGCG
CCTGCAAGACGCGAGCCAATGTCCGGTCCACGCCAAAAGGATGGGTCGAC
GACAACAACGACGGCGGTGTCTGCGCGATTGGTTGATGCTGCGACTCCGG
GGGAACTAACCCGGGTGCTGTATAACCCCGGCCCTACGTTCCGTCGCGCT
CGAGGACGCAAGAAAAAAACACTGTTGGACGCGTCCAGGGTCACCGCAGA
TGACATTGCTGGGTCGGAGAAGGTCCTTGCGCTTGTGGCGGACACTACTC
TCCAGCAGGCATCCCTAAAGAACTACCTGAGAGCGGTTCTCGCTATTCAG
CACGGGTGCGTTCGGGGCTCTATTCCAGTCTCGCGACCAACTGGTGGCAA
CCCGAGCAAGGAAGCACTAGCGATGACAAGAAAGGCGGCTTCAATAAGGG
GATCAGGAGAAAAGGGGACGACAGGGCGTGCGGCATTATCAATGCATCCC
TAAAGAACTACCTGAGAGCGGTTCTCGCTATTCAGCACGGGTGCGTTCGG
GGCTCTATTCCAGTCTCGCGACCAACTGGTGGCAACCCGAGCAAGGAAGC
ACTAGCGATGACAAGAAAGGCGGCTTCAATAAGGGGATCAGGAGAAAAGG
GGACGACAGGGCGTGCGGCATTATCAATGTGTTCTGCGCATGAGTTGGCG
AGCCACATCGTCGTACTTCTGGACGCGAGAGAGAAGGAGTGAGTGTTCTG
CGCATGAGTTGGCGAGCCACATCGTCGTACTTCTGGACGCGAGAGAGAAG
GAGTGA
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