mRNA_M-pyrifera_M_contig105367.1152.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105367.1152.1
Unique NamemRNA_M-pyrifera_M_contig105367.1152.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A518AFQ0_9PLAN (Methyltransf_11 domain-containing protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFQ0_9PLAN)

HSP 1 Score: 132 bits (333), Expect = 8.120e-37
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 1 
Query:    1 DRVCSSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAKTTAS 291
            DR+C +TGVDV +    F  +I+PGGLFVLQIC+DFSG+ P    +NNRLS Y +LF PHG+I+STTNWAGV+LV+D QA VVKGGIVIAT K   S
Sbjct:  121 DRICPATGVDVREATGDFFRYIKPGGLFVLQICTDFSGNHPDEDAYNNRLSSYLELFEPHGEIVSTTNWAGVDLVNDEQAEVVKGGIVIATRKVICS 217
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A517VMU2_9PLAN (Demethylrebeccamycin-D-glucose O-methyltransferase n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VMU2_9PLAN)

HSP 1 Score: 124 bits (310), Expect = 1.840e-33
Identity = 61/92 (66.30%), Postives = 69/92 (75.00%), Query Frame = 1 
Query:    4 RVCSSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAK 279
             VC STGV+VS+ +P  MEFIRPGGLFVLQIC+DF+G      V  NRLSDY  LF PHG+I+  TNWAGV L+ D QAA VKGGIVIAT K
Sbjct:  123 EVCPSTGVNVSEHVPKIMEFIRPGGLFVLQICTDFTGRCADDGVIYNRLSDYIDLFSPHGEIVHLTNWAGVGLLDDEQAAEVKGGIVIATQK 214
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A2E7KNQ6_9PLAN (Methyltransf_11 domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KNQ6_9PLAN)

HSP 1 Score: 129 bits (324), Expect = 5.180e-33
Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 1 
Query:    1 DRVCSSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAKTTA 288
            D+VC STGV+VS++I  F  FI+PGGLFVLQI +DFSGSRP   +HNNRL+DY K+F PHG+II  +NW GV LVSD QA   KGGIVIAT K  A
Sbjct:  473 DQVCPSTGVNVSEKIEGFFRFIKPGGLFVLQIWTDFSGSRPANDIHNNRLADYIKIFAPHGEIIHVSNWDGVALVSDEQAEQEKGGIVIATRKPMA 568
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A3D3R1H2_9PLAN (Methyltransf_11 domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A3D3R1H2_9PLAN)

HSP 1 Score: 117 bits (293), Expect = 6.050e-31
Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 1 
Query:    4 RVCSSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAK 279
             VC  TGV+VS+++P F  FI+PGGLFVLQI ++FSG  P   VHNNRLS++  LF PHG+I+  +NW+GV +  D QAAVVKG +VIAT K
Sbjct:  119 EVCPVTGVNVSEKVPEFFRFIKPGGLFVLQISTNFSGIHPENDVHNNRLSEFVCLFEPHGEIVHKSNWSGVEVTDDVQAAVVKGNLVIATKK 210
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A6C3X3_9PLAN (Methyltransferase type 11 n=2 Tax=Gimesia maris TaxID=122 RepID=A6C3X3_9PLAN)

HSP 1 Score: 115 bits (288), Expect = 3.420e-30
Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:    4 RVCSSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAK 279
             VC  TGV+VS+++P F  FI+PGGLFVLQI +DFSG  P   VHNNRLS++ +LF PHG+I+  +NW+GV +  D QA  VKG +VI T K
Sbjct:  119 EVCEVTGVNVSEKVPGFFRFIKPGGLFVLQISTDFSGRCPENDVHNNRLSEFVRLFDPHGEIVHKSNWSGVEVTDDEQATAVKGNLVITTKK 210
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A517QFS3_9PLAN (Methyltransf_11 domain-containing protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QFS3_9PLAN)

HSP 1 Score: 115 bits (289), Expect = 3.440e-30
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 1 
Query:    1 DRVCSSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAKTTAS 291
            D++C  TG+DV +    F ++I+PGGL VLQIC+DFSG  P    +NNRLS Y  LF+ HG+I+  TNWAG  L SD QAA VKGGIVIAT K   S
Sbjct:  121 DQLCPDTGIDVREATGDFFKYIKPGGLLVLQICTDFSGYNPNKDAYNNRLSSYLDLFQLHGEIVHVTNWAGTPLTSDEQAAKVKGGIVIATRKVNCS 217
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A518IGG8_9PLAN (Methyltransf_11 domain-containing protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IGG8_9PLAN)

HSP 1 Score: 112 bits (280), Expect = 5.900e-29
Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 1 
Query:   22 GVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIAT 273
            GVD  ++   F  F++PGGLF+LQI SDFSG+RP+  VH+NRLSDY+KLF P G II  +NW GV+L+SD QAA +KGG++IAT
Sbjct:  128 GVDPREETAKFFRFLKPGGLFILQIKSDFSGNRPSSEVHHNRLSDYKKLFEPLGDIIHISNWQGVDLISDEQAAGIKGGVLIAT 211
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BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A2E2BY82_9PLAN (Methyltransf_11 domain-containing protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BY82_9PLAN)

HSP 1 Score: 110 bits (276), Expect = 2.360e-28
Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 1 
Query:   22 GVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAK 279
            GVD   +   F  F++PGGLFVLQI +DFSGSRP G VH+NRLSDYR LF P G I+  +N AGV L+ D QAA VKGG+VIAT K
Sbjct:  128 GVDPRIETAKFFRFLKPGGLFVLQIKTDFSGSRPAGDVHHNRLSDYRGLFEPLGDIVHVSNMAGVELIDDNQAAEVKGGVVIATRK 213
[Close]
BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A2E7KBS2_9PLAN (Methyltransf_11 domain-containing protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KBS2_9PLAN)

HSP 1 Score: 92.4 bits (228), Expect = 4.890e-21
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 1 
Query:   13 SSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAK 279
            S  G+D+ ++     EF++PGG FVLQI +DFSG++PT +V + RLS+++ LF   G+II T+N AG  L+ D QAA +KGGIV+A  K
Sbjct:  133 SRIGIDIDEETGKLFEFLKPGGTFVLQIKTDFSGNKPTENVFDCRLSEFKGLFSQFGEIIHTSNTAGAELIDDEQAAKIKGGIVMAIRK 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Match: A0A517WM94_9PLAN (Methyltransf_11 domain-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WM94_9PLAN)

HSP 1 Score: 88.6 bits (218), Expect = 1.470e-19
Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 1 
Query:   13 SSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRLSDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAK 279
            S  G+++ ++     EF++PGG FVLQI +DFSG++P  +V + RLS+++ LF   G+II  +N AGV L+ D QA +VKGGIV+A  K
Sbjct:  132 SRMGINIDEETGKLFEFLKPGGTFVLQIRTDFSGNKPADNVFDCRLSEFKGLFSQFGRIIHVSNVAGVELIDDEQAVMVKGGIVLAVRK 220
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105367.1152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A518AFQ0_9PLAN8.120e-3763.92Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A517VMU2_9PLAN1.840e-3366.30Demethylrebeccamycin-D-glucose O-methyltransferase... [more]
A0A2E7KNQ6_9PLAN5.180e-3365.63Methyltransf_11 domain-containing protein n=3 Tax=... [more]
A0A3D3R1H2_9PLAN6.050e-3158.70Methyltransf_11 domain-containing protein n=3 Tax=... [more]
A6C3X3_9PLAN3.420e-3056.52Methyltransferase type 11 n=2 Tax=Gimesia maris Ta... [more]
A0A517QFS3_9PLAN3.440e-3056.70Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A518IGG8_9PLAN5.900e-2960.71Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A2E2BY82_9PLAN2.360e-2862.79Methyltransf_11 domain-containing protein n=3 Tax=... [more]
A0A2E7KBS2_9PLAN4.890e-2149.44Methyltransf_11 domain-containing protein n=5 Tax=... [more]
A0A517WM94_9PLAN1.470e-1947.19Methyltransf_11 domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105367contigM-pyrifera_M_contig105367:341..637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score115.9
Seed ortholog evalue1.1e-23
Seed eggNOG ortholog344747.PM8797T_10944
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methyltransferase
EggNOG OGsCOG0500@1,COG2226@2
COG Functional cat.Q
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size297
Cds size297
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815561.7752783-CDS-M-pyrifera_M_contig105367:340..6371622815561.7752783-CDS-M-pyrifera_M_contig105367:340..637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105367 341..637 -
1692277464.6833131-CDS-M-pyrifera_M_contig105367:340..6371692277464.6833131-CDS-M-pyrifera_M_contig105367:340..637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105367 341..637 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105367.1152.1prot_M-pyrifera_M_contig105367.1152.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105367 341..637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105367.1152.1

>prot_M-pyrifera_M_contig105367.1152.1 ID=prot_M-pyrifera_M_contig105367.1152.1|Name=mRNA_M-pyrifera_M_contig105367.1152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
DRVCSSTGVDVSKQIPYFMEFIRPGGLFVLQICSDFSGSRPTGSVHNNRL
SDYRKLFRPHGQIISTTNWAGVNLVSDGQAAVVKGGIVIATAKTTASD*
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mRNA from alignment at M-pyrifera_M_contig105367:341..637-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105367.1152.1 ID=mRNA_M-pyrifera_M_contig105367.1152.1|Name=mRNA_M-pyrifera_M_contig105367.1152.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig105367:341..637- (Macrocystis pyrifera P11B4 male)
GACCGAGTCTGCTCCTCAACCGGTGTCGATGTTTCCAAGCAGATCCCGTA
CTTCATGGAATTCATCAGGCCGGGCGGTCTGTTCGTGTTGCAGATCTGTT
CTGACTTCTCAGGCAGTCGACCAACTGGATCCGTACACAACAACCGGCTA
TCAGATTACCGGAAGTTATTCAGACCTCACGGACAAATCATCAGCACGAC
AAACTGGGCTGGGGTGAACCTGGTAAGCGATGGGCAGGCCGCGGTGGTTA
AAGGCGGGATTGTCATCGCGACGGCTAAAACCACTGCTTCAGACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105367:341..637-

>mRNA_M-pyrifera_M_contig105367.1152.1 ID=mRNA_M-pyrifera_M_contig105367.1152.1|Name=mRNA_M-pyrifera_M_contig105367.1152.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig105367:341..637- (Macrocystis pyrifera P11B4 male)
GACCGAGTCTGCTCCTCAACCGGTGTCGATGTTTCCAAGCAGATCCCGTA
CTTCATGGAATTCATCAGGCCGGGCGGTCTGTTCGTGTTGCAGATCTGTT
CTGACTTCTCAGGCAGTCGACCAACTGGATCCGTACACAACAACCGGCTA
TCAGATTACCGGAAGTTATTCAGACCTCACGGACAAATCATCAGCACGAC
AAACTGGGCTGGGGTGAACCTGGTAAGCGATGGGCAGGCCGCGGTGGTTA
AAGGCGGGATTGTCATCGCGACGGCTAAAACCACTGCTTCAGACTGAGAC
CGAGTCTGCTCCTCAACCGGTGTCGATGTTTCCAAGCAGATCCCGTACTT
CATGGAATTCATCAGGCCGGGCGGTCTGTTCGTGTTGCAGATCTGTTCTG
ACTTCTCAGGCAGTCGACCAACTGGATCCGTACACAACAACCGGCTATCA
GATTACCGGAAGTTATTCAGACCTCACGGACAAATCATCAGCACGACAAA
CTGGGCTGGGGTGAACCTGGTAAGCGATGGGCAGGCCGCGGTGGTTAAAG
GCGGGATTGTCATCGCGACGGCTAAAACCACTGCTTCAGACTGA
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