mRNA_M-pyrifera_M_contig105343.1146.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A7X5WNG7_9ACTN (TIGR03617 family F420-dependent LLM class oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WNG7_9ACTN) HSP 1 Score: 371 bits (952), Expect = 3.850e-127 Identity = 180/212 (84.91%), Postives = 196/212 (92.45%), Query Frame = 1 Query: 1 AAASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AAA+GLVT L +GTA+AVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAH+ERRYSADY+PPGPRMKEYVQ+IQAIFRAFRGEEKLSF G+ Y FSLLPAQWSPGPIDA DPPIFVSAVLPWMSRMAGEVCDGIH+HPF+SP YV + QRPHVE G +RAGRDL++VTFEIPVMTPVGDT+EE+ +RE AR MIAFYGSTRTYSPVF Sbjct: 38 AAAAGLVTERLGLGTAIAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHIERRYSADYAPPGPRMKEYVQAIQAIFRAFRGEEKLSFDGEHYSFSLLPAQWSPGPIDAPDPPIFVSAVLPWMSRMAGEVCDGIHVHPFHSPEYVRDHQRPHVEAGAARAGRDLADVTFEIPVMTPVGDTEEEMVRSREDARGMIAFYGSTRTYSPVF 249
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A7K1ZD35_9ACTN (TIGR03617 family F420-dependent LLM class oxidoreductase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZD35_9ACTN) HSP 1 Score: 365 bits (937), Expect = 1.650e-124 Identity = 175/212 (82.55%), Postives = 196/212 (92.45%), Query Frame = 1 Query: 1 AAASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AAA+GL T LR+GTAVAVAFPRSPM+TAS AWELA+AT+GRFTLGLGTQVKAH+ERRYS+ Y+PPGPRMKEYVQ++QAIFRAFRGEEKLSF GD+Y FSLLP QWSPGPI +DPPI+VSAVL WMSRMAGEVCDGIHIHPFNS YV +VQRP V+EGV RAGR+L++VTFEIPVMTPVGDT+EE+AE+REHARQMIAFYGSTRTYSPVF Sbjct: 63 AAAAGLATEKLRLGTAVAVAFPRSPMVTASVAWELAEATEGRFTLGLGTQVKAHIERRYSSSYAPPGPRMKEYVQALQAIFRAFRGEEKLSFDGDYYSFSLLPPQWSPGPIAVADPPIYVSAVLGWMSRMAGEVCDGIHIHPFNSAAYVRDVQRPRVQEGVDRAGRELADVTFEIPVMTPVGDTEEEMAESREHARQMIAFYGSTRTYSPVF 274
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A3M2HF43_ACTSX (TIGR03617 family F420-dependent LLM class oxidoreductase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HF43_ACTSX) HSP 1 Score: 335 bits (860), Expect = 4.210e-113 Identity = 158/211 (74.88%), Postives = 182/211 (86.26%), Query Frame = 1 Query: 4 AASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AA+ L T + IGTA+AVAFPRSPM+TA+ AWELADAT GRFTLGLGTQVKAH+ERRYS +Y+PPGPR++EYVQ+++AIF AFRG+E+L F GDFY FSLLP WSPGPI DPP+FVSAVLPWMSRMAGE+CDG+HIHPF+SPTY+ EVQ P + EG RAGRDLS VT EIPVMT VGDT+ E+AETREHAR MIAFYGSTRTY+P F Sbjct: 44 AAAALATERIGIGTAIAVAFPRSPMVTAAVAWELADATGGRFTLGLGTQVKAHIERRYSTEYAPPGPRLREYVQALRAIFAAFRGDERLDFDGDFYHFSLLPPTWSPGPIAVPDPPVFVSAVLPWMSRMAGELCDGVHIHPFHSPTYLREVQIPAIAEGARRAGRDLSAVTLEIPVMTAVGDTEAEIAETREHARTMIAFYGSTRTYAPTF 254
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A432JS96_9ACTN (LLM class F420-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A432JS96_9ACTN) HSP 1 Score: 323 bits (827), Expect = 3.780e-108 Identity = 154/211 (72.99%), Postives = 181/211 (85.78%), Query Frame = 1 Query: 4 AASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AA+GL T+ + IGTA+AVAFPRSPMITA AWELA++T GRFTLGLGTQVKAHVERRYS+ Y+PPGPR+KEYV +++AIFRAFRGEE+LSF GD Y FSLLPAQWSPGPID DPPI++SAVLPWM+RMAG VCDGIHIHPF+SP YVA+VQ P++ +G + GR + +VT PVMT VGDTDEE+A R+HAR MI FYGSTRTY+PVF Sbjct: 40 AAAGLATTRVGIGTAIAVAFPRSPMITAKVAWELAESTGGRFTLGLGTQVKAHVERRYSSAYAPPGPRLKEYVLALKAIFRAFRGEERLSFDGDHYSFSLLPAQWSPGPIDVEDPPIYISAVLPWMTRMAGAVCDGIHIHPFHSPQYVADVQVPNLVKGAAGEGRTIDDVTLVCPVMTAVGDTDEEIAAGRDHARLMIGFYGSTRTYAPVF 250
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A424K054_9PROT (TIGR03617 family F420-dependent LLM class oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A424K054_9PROT) HSP 1 Score: 318 bits (814), Expect = 3.930e-106 Identity = 147/210 (70.00%), Postives = 180/210 (85.71%), Query Frame = 1 Query: 7 ASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AS + T+ L+IGT +AVAF RSPM+TA AWELA AT GRF LGLG+QVKAH+ERRYS+++SPPGPRMKEYV+S++AIFRAFRGEEKLS+SG +Y FSLLP WSPGPID DPP+++SAVLP+MSR+ GEV DGIH+HPF+SP+YV EVQR +EEG++R+GR L E+TF P+MT VGD DE+L TREHAR M++FYGSTRTYSP+F Sbjct: 45 ASAIGTTRLQIGTGIAVAFARSPMVTAGIAWELAAATGGRFVLGLGSQVKAHIERRYSSEFSPPGPRMKEYVESVKAIFRAFRGEEKLSYSGQYYNFSLLPGAWSPGPIDVPDPPVYISAVLPYMSRLVGEVADGIHVHPFHSPSYVREVQRTAIEEGLARSGRSLEEITFSCPIMTSVGDRDEDLEATREHARLMVSFYGSTRTYSPMF 254
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A7C7Y8R7_9DELT (TIGR03617 family F420-dependent LLM class oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7Y8R7_9DELT) HSP 1 Score: 313 bits (803), Expect = 1.960e-104 Identity = 142/210 (67.62%), Postives = 179/210 (85.24%), Query Frame = 1 Query: 7 ASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AS L T ++IGT +AVAF RSPM+TA AWELA AT GRF LGLG+QVK+H+ERRYSAD++PPGPRMKEYV+S++AIFRA+RGEEKL++ G +Y FSLLPA WSPGPI+ DPP+++SAVLP+MSR+ GE+ DGIH+HPF+SP YV +VQR +E G++R+GR L ++TF P+MT VGDTDE+LA+TREHAR MI FYGSTRTY+P+F Sbjct: 45 ASALATDRIQIGTGIAVAFARSPMVTAGIAWELAAATGGRFVLGLGSQVKSHIERRYSADFAPPGPRMKEYVESVKAIFRAYRGEEKLNYEGQYYNFSLLPAAWSPGPIEVPDPPVYISAVLPYMSRLVGEIADGIHVHPFHSPEYVRDVQRTAIEVGLARSGRSLEDITFSCPIMTSVGDTDEDLAKTREHARLMIGFYGSTRTYAPIF 254
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A2E5YMD7_9DELT (LLM class F420-dependent oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YMD7_9DELT) HSP 1 Score: 309 bits (791), Expect = 1.210e-102 Identity = 143/212 (67.45%), Postives = 178/212 (83.96%), Query Frame = 1 Query: 1 AAASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 A AS L T L+IGT +AVAFPRSPM+TA AWELA +T GRF LGLG+QVKAH+ERRYS++++PPGPRMKEYV+S++AIFRAF G EKLS+ G+FY FSLLP+ WSPGPI+ PP+++SAVLP+MSR+ GEV DGIH+HPF+SP YV +VQ + +G++R+GR L ++TF P+MT VGDTDEEL+ TREH+R MIAFYGSTRTYSPVF Sbjct: 43 ATASALATDRLQIGTGIAVAFPRSPMVTAGIAWELAASTGGRFVLGLGSQVKAHIERRYSSEFAPPGPRMKEYVESVKAIFRAFSGVEKLSYEGEFYHFSLLPSTWSPGPIEVEAPPVYISAVLPYMSRLVGEVADGIHVHPFHSPEYVKDVQGKAIAKGLARSGRTLDDITFSCPIMTAVGDTDEELSRTREHSRMMIAFYGSTRTYSPVF 254
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A7C8DKK9_9DELT (TIGR03617 family F420-dependent LLM class oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8DKK9_9DELT) HSP 1 Score: 307 bits (787), Expect = 4.750e-102 Identity = 141/210 (67.14%), Postives = 176/210 (83.81%), Query Frame = 1 Query: 7 ASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AS L T L+IGT +AVAF RSPM+TA AWELA AT GRF LGLG+QVK H+ERRYSA+Y+PPGPRMKEYV+S++AIFRAFRGEEKL + G +Y FSLLPA WSPGPID +DPP+++SAVLP+MSR+ GE+ DGIH+HPF+S +V +VQ+ +EEG+ R+GR L ++TF P+MT VGDTD+EL +TREH+R MIAFYGSTR Y+P+F Sbjct: 45 ASALATDQLQIGTGIAVAFGRSPMVTAGIAWELAAATGGRFVLGLGSQVKGHIERRYSAEYTPPGPRMKEYVESVKAIFRAFRGEEKLHYEGKYYNFSLLPAAWSPGPIDVADPPVYISAVLPYMSRLVGEIADGIHVHPFHSVEFVRDVQKVSIEEGLVRSGRTLDDITFSCPIMTAVGDTDQELEKTREHSRMMIAFYGSTRAYAPMF 254
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A2D6MPF7_9DELT (LLM class F420-dependent oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6MPF7_9DELT) HSP 1 Score: 308 bits (789), Expect = 6.480e-101 Identity = 142/210 (67.62%), Postives = 175/210 (83.33%), Query Frame = 1 Query: 7 ASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPVF 636 AS L T L+IGT +AVAFPRSPM+TA AWELA AT+GRF LGLG+QVK H+ERRYS ++SPPGPRMKEYV+S++AIFRAF GEEKLS+ G++Y FSLLP WSPGPID PP+++SAVLP+MSR+ G+V DGIH+HPF+SP YV +VQ +EEG++R+GR + +TF IP+MT VGD+DEEL +TR H+R MIAFYGSTR YSPVF Sbjct: 152 ASALTTERLQIGTGIAVAFPRSPMVTAGIAWELAAATNGRFVLGLGSQVKGHIERRYSTEFSPPGPRMKEYVESVKAIFRAFAGEEKLSYEGEYYNFSLLPDTWSPGPIDVPAPPVYISAVLPYMSRLVGQVADGIHVHPFHSPGYVRDVQCKQIEEGLARSGRTMEAITFSIPIMTAVGDSDEELEKTRSHSRMMIAFYGSTRAYSPVF 361
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Match: A0A2E5ZFJ1_9ACTN (LLM class F420-dependent oxidoreductase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZFJ1_9ACTN) HSP 1 Score: 295 bits (756), Expect = 2.550e-97 Identity = 140/210 (66.67%), Postives = 168/210 (80.00%), Query Frame = 1 Query: 4 AASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQVKAHVERRYSADYSPPGPRMKEYVQSIQAIFRAFRGEEKLSFSGDFYEFSLLPAQWSPGPIDASDPPIFVSAVLPWMSRMAGEVCDGIHIHPFNSPTYVAEVQRPHVEEGVSRAGRDLSEVTFEIPVMTPVGDTDEELAETREHARQMIAFYGSTRTYSPV 633 AA+ L T L +GTA+ VAFPRSPM+TA AWELA+AT GR+ +GLGTQVKAHVERRYS+DY+PPGPRM+EYV++++AIFRAFRGEEKL+F GD Y F+LLP WSPGPIDA DPP+++SAVLPWMSRMAG CDG+HIHP +SP ++ +VQ P V EG + AGR L +VT PV+ VGDTDEEL RE R IAFYGST Y+PV Sbjct: 44 AAAALTTERLGLGTAITVAFPRSPMLTAQMAWELAEATGGRYVVGLGTQVKAHVERRYSSDYAPPGPRMREYVRAVKAIFRAFRGEEKLAFEGDHYSFTLLPRMWSPGPIDAPDPPVYISAVLPWMSRMAGAECDGVHIHPMHSPGWLTDVQLPLVAEGATSAGRSLDDVTVVCPVIAAVGDTDEELTAAREANRATIAFYGSTPNYAPV 253 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105343.1146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105343.1146.1 >prot_M-pyrifera_M_contig105343.1146.1 ID=prot_M-pyrifera_M_contig105343.1146.1|Name=mRNA_M-pyrifera_M_contig105343.1146.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp AAASGLVTSALRIGTAVAVAFPRSPMITASTAWELADATDGRFTLGLGTQback to top mRNA from alignment at M-pyrifera_M_contig105343:2..637+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105343.1146.1 ID=mRNA_M-pyrifera_M_contig105343.1146.1|Name=mRNA_M-pyrifera_M_contig105343.1146.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig105343:2..637+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105343:2..637+ >mRNA_M-pyrifera_M_contig105343.1146.1 ID=mRNA_M-pyrifera_M_contig105343.1146.1|Name=mRNA_M-pyrifera_M_contig105343.1146.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig105343:2..637+ (Macrocystis pyrifera P11B4 male)back to top |