mRNA_M-pyrifera_M_contig1053.1133.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Match: D7FU20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU20_ECTSI) HSP 1 Score: 589 bits (1518), Expect = 1.640e-207 Identity = 312/434 (71.89%), Postives = 344/434 (79.26%), Query Frame = 1
Query: 64 FRHTLLGIPLPPPATVDYEQALKDAQRESIQVNGQLFKGDVDELLKTLRGLIGPLVVGDEILMRTVCQDIVRASSRTSSGGDTYAVMAALLSRPAEGDLLTPSGAESAAIGISVDAADGEVVITVENSFLLRRNAIDGAGNITXXXXXXXPPPTGVCAGNSGGGEKGGLKERMVRARGQLDDLVEQTAEQFRKMTAKREVWSGPGWSVD---------GAIP-----KDSRCSPGGVAAA-----------EAAGISLLGTVEVYLCLLDGSSKRRLRVTCPDVERCPPECMLLGAGANEANGTYELVGFRHGAPVYTKGKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVDTALPPELHWALMNGGAGQDPPPTLMMHSQRR--ERIIDIREMPTPRQRWAIGPNVTFPDNTDHNLVGSAIVVRPPTPSTPP 1284
F TLLGI LPPP VDY+QA KDAQRESI++NG+LF+G+VDELL+TLRGLI PLVVGDE L R VC DI+RASSRTSSGGD YAVMAALLSRPAEGDLLTPSG+ S+ IGISV +ADGEVVITVEN F+LRRNA+ G G P + +SG EKG LKERMVRAR QL + VEQTAEQFRKMTA++EVW GPGWSVD G + K R SP AA EA GISL+G VEVYLCLLDGSSKRRLRVTCPD+ERCPPEC+LLGAGANEANGTYEL GFR+GAP YT GKDDVTIAKECLGGREGWIIGRPPNYVLYGQPV+T LPPELHWALMNGG G +PPPTLMMHS RR ER++DIR+MPTPR RWAI +VTFPD+TDHNLVGSA++VRPPTPSTPP
Sbjct: 41 FGSTLLGIMLPPPGPVDYDQAWKDAQRESIKMNGRLFEGNVDELLETLRGLIDPLVVGDETLTRAVCHDIMRASSRTSSGGDAYAVMAALLSRPAEGDLLTPSGSGSSPIGISVASADGEVVITVENRFVLRRNAMQGLG---------MGEPHQQSSASSG--EKGTLKERMVRAREQLVEHVEQTAEQFRKMTARKEVWGGPGWSVDDVGGGDGGDGGVSCSGGTKTPRNSPNNGGAAXXADAPAPADDEAGGISLVGRVEVYLCLLDGSSKRRLRVTCPDIERCPPECILLGAGANEANGTYELAGFRNGAPFYTNGKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVNTDLPPELHWALMNGGTGLNPPPTLMMHSHRRAKERLVDIRQMPTPRARWAIPADVTFPDDTDHNLVGSAMIVRPPTPSTPP 463
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Match: A0A6H5KR82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR82_9PHAE) HSP 1 Score: 620 bits (1599), Expect = 1.460e-205 Identity = 327/454 (72.03%), Postives = 357/454 (78.63%), Query Frame = 1
Query: 7 KPQVEVSSSDDELLTVLTKFRHTLLGIPLPPPATVDYEQALKDAQRESIQVNGQLFKGDVDELLKTLRGLIGPLVVGDEILMRTVCQDIVRASSRTSSGGDTYAVMAALLSRPAEGDLLTPSGAESAAIGISVDAADGEVVITVENSFLLRRNAIDGAGNITXXXXXXXPPPTGVCAGNSGGGEKGGLKERMVRARGQLDDLVEQTAEQFRKMTAKREVWSGPGWSVDGA------------------------IPKDSRCSPGGVAAA--EAAGISLLGTVEVYLCLLDGSSKRRLRVTCPDVERCPPECMLLGAGANEANGTYELVGFRHGAPVYTKGKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVDTALPPELHWALMNGGAGQDPPPTLMMHSQRR--ERIIDIREMPTPRQRWAIGPNVTFPDNTDHNLVGSAIVVRPPTPSTPP 1284
K QVEVS SDDELLTVL KFRHTLLGIPLPPPA VDY+QALKDAQRESI++NG+LF+G+VDELLKTLRGLI PLVVGDE L R VC DI+RASSRTSSGGD YAVMAALLSRPA+GDLLTPSG+ S+ IGIS+ ADGEVVITVENSF+LRRNA+ G G P +S GEKG LKERMVRAR QL + VEQTAEQFRKMTA++EVW GPGWSVD AAA EA GISL+G VEVYLCLLDGSSKRRLRV CPD+ERCPPEC+LLGAGANEANGTYEL GFR+GAP YT KDDVTIAKECLGGREGWIIGRPPNYVLYGQPV+T LPPELHWALMNGG G +PPPTLMMHS RR ER++DIR+MPTPR RWAI +VTFPD+TDHNLVGSA++VRPPTPSTPP
Sbjct: 1166 KTQVEVSGSDDELLTVLAKFRHTLLGIPLPPPAPVDYDQALKDAQRESIEMNGRLFEGNVDELLKTLRGLIDPLVVGDETLTRAVCHDIIRASSRTSSGGDAYAVMAALLSRPAKGDLLTPSGSGSSPIGISIAGADGEVVITVENSFVLRRNAMQGLG-------MGEPQQQS----SSSSGEKGTLKERMVRAREQLVEHVEQTAEQFRKMTARKEVWGGPGWSVDDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADAPAAADDEADGISLVGRVEVYLCLLDGSSKRRLRVNCPDIERCPPECILLGAGANEANGTYELAGFRNGAPFYTNDKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVNTDLPPELHWALMNGGTGLNPPPTLMMHSHRRAKERLMDIRQMPTPRARWAIPADVTFPDDTDHNLVGSAMIVRPPTPSTPP 1608
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Match: A0A835YWH6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH6_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.800e-40 Identity = 107/276 (38.77%), Postives = 139/276 (50.36%), Query Frame = 1
Query: 427 VITVENSFLLRRNAIDGAGNITXXXXXXXPPPTGVCAGNSGGGEKGG----------LKERMVRARGQLDDLVEQTAEQFRKM----------TAKREV---WSGPGWSVDGAIPKDSRCSPGGVAAAEAAGISLLGTVEVYLCLLDGSSKRRLRVTCPDVERCPPECMLLGAGANEANGTYELVGFRHGAPVYTKGKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVDTALPPELHWALMNGGAGQDPPPTLMMHSQRR--ERIIDIREMPTPR 1179
VITV+NSFLLR+ DG G AG G KG K++ VR G L + + + + A+ +V W G G G P SP L G +EVYL L DG+ KRRL +T P VE PP+C+ LGAG+ ANGT++L G+RHGAP YT VTI + L GR GW++ + P+ V Y +A PP+LHW L++ G G +PPPTLM Q+R ER +DIRE+PTPR
Sbjct: 90 VITVQNSFLLRKGDPDGMGG---------------GAGGEGALSKGFRARIKENLRVTKDKKVRYTGHLAPELGYLLDGYCSVKPHSHCCSAAAAEPKVMARWPGEG----GEEPPPPDASPTYEVDEMGESCVLNGRMEVYLSLPDGACKRRLAITSPLVETAPPQCIALGAGSAAANGTFDLTGWRHGAPFYTNTASGVTIGRVELEGRAGWVMRKEPHKVYYCCTEASAHPPDLHWTLVSMGDGNEPPPTLMTSYQKRVKERPVDIRELPTPR 346
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Match: A0A7S1UIL6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIL6_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.350e-31 Identity = 125/390 (32.05%), Postives = 185/390 (47.44%), Query Frame = 1
Query: 7 KPQVEVSSSDDELLTVLTKFRHTLLGIPLPPPATVDYEQALKDAQRESIQVNGQLFKGDVDELLKTLRGLIGPLVV-GDEILMRTVCQDIVRASSRTSSGGDTYAVMAALLSRPAEG----DLLTPSGAESAAIGISVDAADGEVVITVENSFLLRRNAIDGAGNITXXXXXXXPPPTGVCAGNSGGGEKGGLKERMVRARGQLDDLVEQTAEQFRKMTAKREVWSGPGWSVDGAIPKDSRCSPGGVAAAEAAGISLLGTVEVYLCLLDGSS-KRRLRVTCPDVERCPPECMLLGAGANEANGTYELVGFRHGAPVYTKG---------KDDVTIAKECLGGREGWIIGRPPNY-VLYGQPVDTALPPELHWALMNGGAGQ--DPPPTLM 1122
K QV++ LLTV+ FR L +PLP P V EQALKDA RE ++VNG +G+ D L +T+R + LV +++L+ +V D++RASSRT+ GGD Y ++ +L R A+ DLLTPS + I ++V+ +G + I + FLLR G + GV + E+ ++ + R + ++V T + + + V+ P +C I L VEV L LLDG S +R +R+ CP VE P +C+ LGA ANG+Y+L GF HG P Y + V++ K E +IG + +YG D+ PP L++G Q P PTLM
Sbjct: 836 KTQVQLCKERRALLTVMHLFRDFLHRVPLPRPLAVQAEQALKDAGRERVRVNGVPVEGNADVLRETVREALLSLVDDSNDVLVNSVVTDVMRASSRTAHGGDAYLILQSLFVRQADDGMPVDLLTPSPEQPPPIEVTVNP-NGFISIQSTDRFLLRDAQAIMMGELED----------GVDDDDEADSEEKHNRKFLSR----IKNVV--TGRRQHHVHKYQYVFDNP-----------EKC------------IHLDTQVEVMLGLLDGGSWERTIRIACPQVENIPAQCIFLGAAHAPANGSYDLQGFAHGKPWYLNRHGYTLRYAESEKVSLGKLPCPRWE--VIGSAHHQRPIYGAAPDSLPPPHPWVVLLDGVLAQVLSPAPTLM 1183
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Match: A0A4D9DEA1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEA1_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.490e-30 Identity = 120/393 (30.53%), Postives = 172/393 (43.77%), Query Frame = 1
Query: 13 QVEVSSSDDELLTVLTKFRHTLLGIPLPPPATVDYEQALKDAQRESIQVNGQLFKGDVDELLKTLRGLIGPLVVGDEILMRTVCQDIVRASSRTSSGGDTYAVMAALLSRPAEGDLLTPS-GAESAAIGISVDAADGEVVITVENSFLLRRNAI-DGAGNITXXXXXXXPPPT------------GVCAGNSGGGEKGGLKERMVRARGQLDDLVEQTAEQFRKMTAKREVWSGPGWSVDGAIPKDSRCS--------------------------------------------PGGVAAAEAAGISLLGTVEVYLCLLDGSSKRRLRVTCPDVERCPPECMLLGAGANEANGTYELVGFRHGAPVYTKGKDDVTI-----AKECLGGREGWI 1002
+V +++ D LT+L + + L + LPPPA VD QA KDAQRE++ +NG+ F GD L + L+ PLVV E +CQDI+RASSRT+SGGD+Y + +LL RP G+LLTP+ A S I I + A +G V I NS++L + + DG G P G G S + GG +M++A G F++ R + G + C+ A E I L +EV L +L +S R++RV C + ER P ++LGAG + NGTY L GF+ AP Y K +++ A+ L EGW+
Sbjct: 640 RVHKAATPDMFLTLLHRSQSFLNCLHLPPPAAVDVPQAWKDAQRETVVLNGRSFSGDPSGLQSEMHRLVAPLVVDSETAT-LLCQDILRASSRTASGGDSYVITTSLLVRP--GNLLTPATAASSIPISIHIGAEEGVVDIAAYNSYVLHWDMLEDGGGEAGKEERKEARNPNEWGLPMWQSYIDGGREGTSTRKKMGGFLTQMLQASG---------GNGFQRHVHPRRYFQDGGKGPGEGVGTREECTGTEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGER--IVLQTLLEVRLDVLTRNSSRKMRVWCQETERVPGSFLVLGAGEGKVNGTYFLHGFQGRAPWYMKEEEEGEEEEGERARVVLVRDEGWV 1018
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Match: K8YUK8_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUK8_NANGC) HSP 1 Score: 124 bits (310), Expect = 3.600e-28 Identity = 114/365 (31.23%), Postives = 158/365 (43.29%), Query Frame = 1
Query: 97 PPATVDYEQALKDAQRESIQVNGQLFKGDVDELLKTLRGLIGPLVVGDEILMRTVCQDIVRASSRTSSGGDTYAVMAALLSRPAEGDLLTPS-GAESAAIGISVDAADGEVVITVENSFLLRRNAI-DGAGNITXXXXXXXPPPT------------GVCAGNSGGGEKGGLKERMVRARGQLDDLVEQTAEQFRKMTAKREVWS----GPGWSVD------GAIPKDSRCSPGGVAAAEAAGISLLGT----------------------------------VEVYLCLLDGSSKRRLRVTCPDVERCPPECMLLGAGANEANGTYELVGFRHGAPVYTKGKDDVTI-----AKECLGGREGWI 1002
PPA VD QA KDAQRE++ +NG+ F GD L + L+ PLVV E +CQDI+RASSRT+SGGD+Y + +LL RP G+LLTP+ A S I I + A +G V I NS++L + + DG G P+ G G S + GG +M++A G F++ R + GPG V G GV + + LG +EV L +L +S R++RV C + E+ P ++LGAG + NGTY L GF+ AP Y K + A+ L EGW+
Sbjct: 1 PPAAVDVLQAWKDAQRETVVLNGRSFSGDPSGLQSEMHRLVAPLVVDSETAT-LLCQDILRASSRTASGGDSYVITTSLLVRP--GNLLTPAMAASSIPISIHIGAEEGVVDIAAYNSYVLHWDMLEDGGGGAGKEGRKEARNPSEWDLPMWQSYIDGGREGTSTRKKMGGFLTQMLQASG---------GNGFQRHVHPRRYFQDRGKGPGEGVGTREECTGTEDAGKEKEQTGVGSKKEGDQDRLGEKGXXXXXXXXXXXXXXXXXXXXXXAGERIVLQTLLEVRLDVLTRNSSRKMRVWCQETEKVPGSFLVLGAGEGKVNGTYFLHGFQGRAPWYMKEEXXXXXXXGERARVVLVRDEGWV 353
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Match: W7TIK0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIK0_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.460e-9 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 214 LIGPLVVGDEILMRTVCQDIVRASSRTSSGGDTYAVMAALLSRPAEGDLLTPS-GAESAAIGISVDAADGEVVITVENSFLLRRNAIDGAG 483
L+ PLVV E +CQDI+RASSRT+SGGD+Y + +LL RP G+LLTP+ A S I I + A +G V I NS++L + ++ G
Sbjct: 4 LVAPLVVDSETAT-LLCQDILRASSRTASGGDSYVITTSLLVRP--GNLLTPAMAASSIPISIHIGAEEGVVDIAAYNSYVLHWDMLEDGG 91 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1053.1133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1053.1133.1 >prot_M-pyrifera_M_contig1053.1133.1 ID=prot_M-pyrifera_M_contig1053.1133.1|Name=mRNA_M-pyrifera_M_contig1053.1133.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=428bp MRKPQVEVSSSDDELLTVLTKFRHTLLGIPLPPPATVDYEQALKDAQRESback to top mRNA from alignment at M-pyrifera_M_contig1053:16606..26679+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1053.1133.1 ID=mRNA_M-pyrifera_M_contig1053.1133.1|Name=mRNA_M-pyrifera_M_contig1053.1133.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10074bp|location=Sequence derived from alignment at M-pyrifera_M_contig1053:16606..26679+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1053:16606..26679+ >mRNA_M-pyrifera_M_contig1053.1133.1 ID=mRNA_M-pyrifera_M_contig1053.1133.1|Name=mRNA_M-pyrifera_M_contig1053.1133.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2568bp|location=Sequence derived from alignment at M-pyrifera_M_contig1053:16606..26679+ (Macrocystis pyrifera P11B4 male)back to top |