mRNA_M-pyrifera_M_contig105245.1128.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A2E3GWT2_9PLAN (Type I restriction enzyme endonuclease subunit (Fragment) n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E3GWT2_9PLAN) HSP 1 Score: 421 bits (1082), Expect = 1.950e-140 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK Sbjct: 193 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 404
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: F0SJ50_RUBBR (Type I restriction enzyme endonuclease subunit n=1 Tax=Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / IAM 15109 / NBRC 103401 / IFAM 1448) TaxID=756272 RepID=F0SJ50_RUBBR) HSP 1 Score: 418 bits (1075), Expect = 5.390e-137 Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGA+TPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIG EYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK Sbjct: 425 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAITPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGAEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A2E2C8P1_9PLAN (Type I restriction enzyme endonuclease subunit (Fragment) n=2 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E2C8P1_9PLAN) HSP 1 Score: 389 bits (999), Expect = 1.800e-129 Identity = 191/212 (90.09%), Postives = 205/212 (96.70%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYG AHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVED AVTPILYEGRMSEL GDQ+ IDKWFDRITKDLSDEQKADLKKKFRREEELTKTSER+YE+AFD+ THFCENFK +KFKGQFAVSSKAMALKYH+LFEEIG+EYPERK+++RV+ISPPDTREDNETIEE+DIPEIQ+FW+ MMDEFGSEK Sbjct: 438 FVLVDESHRSQYGLAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDKAVTPILYEGRMSELHGDQKAIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERLYEIAFDLVTHFCENFKGTKFKGQFAVSSKAMALKYHQLFEEIGKEYPERKISSRVIISPPDTREDNETIEEEDIPEIQQFWKAMMDEFGSEK 649
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A517VFF6_9PLAN (Type I restriction enzyme endonuclease subunit n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517VFF6_9PLAN) HSP 1 Score: 387 bits (994), Expect = 6.320e-125 Identity = 189/212 (89.15%), Postives = 204/212 (96.23%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYG AHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVED AVTPILYEGRMSEL GDQ+ IDKWFDRITKDLSDEQK DLKKKFRREEELTKTSER+YE+AFD+ THFCENFK + FKGQFAVSSKAMALKYH+LFEEIG+EYPERK+++RV+ISPPDTREDNETIEE+D+PEIQ+FW+EMMDEFGSEK Sbjct: 438 FVLVDESHRSQYGLAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDKAVTPILYEGRMSELHGDQKAIDKWFDRITKDLSDEQKVDLKKKFRREEELTKTSERLYEIAFDLVTHFCENFKGTPFKGQFAVSSKAMALKYHQLFEEIGKEYPERKISSRVIISPPDTREDNETIEEEDVPEIQQFWKEMMDEFGSEK 649
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A518CU89_9PLAN (Type I restriction enzyme endonuclease subunit n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CU89_9PLAN) HSP 1 Score: 381 bits (979), Expect = 1.420e-122 Identity = 186/212 (87.74%), Postives = 204/212 (96.23%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYG AHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMR+AVED AVTPILYEGRMSE+ GDQ+ IDKWFDRITKDLSDEQKADLKKKFRREEELTKTSER+YE+AFD+ THFC+NFK +KFKGQFAVSSKAMALKYH+LFE+IG+EYPER+V++RV+ISPPDTREDNETIEE+D+PEIQKFW + MDEFGSEK Sbjct: 438 FVLVDESHRSQYGLAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRKAVEDKAVTPILYEGRMSEIQGDQKAIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERLYEIAFDLVTHFCDNFKGTKFKGQFAVSSKAMALKYHQLFEDIGKEYPERRVSSRVIISPPDTREDNETIEEEDMPEIQKFWIKTMDEFGSEK 649
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A518C3F3_9BACT (Type I restriction enzyme endonuclease subunit n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C3F3_9BACT) HSP 1 Score: 379 bits (974), Expect = 5.510e-122 Identity = 187/212 (88.21%), Postives = 203/212 (95.75%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYG AHAKMKQVFPNACYIGFTGTPLLK+EKSTATKFGGFIH+YPMR+AVED AVTPILYEGRMSE+ GDQ+ IDKWFDRITKDLSDEQKADLKKKFRREEELTKTSER+YE+AFDIATHFCE FK +KFKGQFAVSSKAMALKYH LFEEIG+E+P R V+TRV+ISPPDTREDNETIEE+DIPEIQ+FW++MMDEFGSEK Sbjct: 438 FVLVDESHRSQYGLAHAKMKQVFPNACYIGFTGTPLLKQEKSTATKFGGFIHTYPMRKAVEDKAVTPILYEGRMSEMHGDQKAIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERLYEIAFDIATHFCETFKGTKFKGQFAVSSKAMALKYHLLFEEIGKEHPNRAVSTRVIISPPDTREDNETIEEEDIPEIQQFWKKMMDEFGSEK 649
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A5C6BA90_9PLAN (Type I restriction enzyme endonuclease subunit n=1 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6BA90_9PLAN) HSP 1 Score: 377 bits (968), Expect = 5.840e-121 Identity = 184/212 (86.79%), Postives = 202/212 (95.28%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYG AHAKMKQVFP AC+IGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVED AVTPILYEGRMSEL GDQ+ IDKWFDRITKDLS EQKADLKKKFRREEELTKTSER+YE+AFD+ THFCENFK +KFKGQFAVSSKAMALKYH+LFE+IG+ YPER++++RV+ISPPDTREDNETIEE D+PEIQKFW++MMD+FGSEK Sbjct: 438 FVLVDESHRSQYGLAHAKMKQVFPKACFIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDKAVTPILYEGRMSELHGDQKAIDKWFDRITKDLSAEQKADLKKKFRREEELTKTSERLYEIAFDLVTHFCENFKGTKFKGQFAVSSKAMALKYHQLFEQIGKAYPERRLSSRVIISPPDTREDNETIEEDDVPEIQKFWKQMMDQFGSEK 649
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: UPI0013DCE302 (type I restriction endonuclease subunit R n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI0013DCE302) HSP 1 Score: 369 bits (947), Expect = 7.080e-118 Identity = 177/212 (83.49%), Postives = 201/212 (94.81%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSEK 636 FVLVDESHRSQYG AHAKMKQVFPNACYIGFTGTPL+ KEKSTA KFGGFIHSYPMR+AVED AVTPILYEGRMSEL GDQ+ IDKWFDRITKDLS++QKADLKK+FRREEELTKTSER+YE+AFD+ATHFCENFK ++FKGQFAVSSKAMAL+YH+L EEIG EYP+R ++TRV+IS PDTREDNETIEE+D+PEIQ+FW++MMD+FGSE+ Sbjct: 438 FVLVDESHRSQYGLAHAKMKQVFPNACYIGFTGTPLMNKEKSTAEKFGGFIHSYPMRKAVEDKAVTPILYEGRMSELHGDQKAIDKWFDRITKDLSNQQKADLKKRFRREEELTKTSERLYEIAFDVATHFCENFKGTRFKGQFAVSSKAMALQYHQLLEEIGREYPDRSISTRVIISAPDTREDNETIEEEDVPEIQRFWKQMMDQFGSER 649
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A2V3W559_9PROT (Type I restriction enzyme endonuclease subunit n=1 Tax=Nitrosomonas sp. Nm84 TaxID=200124 RepID=A0A2V3W559_9PROT) HSP 1 Score: 294 bits (752), Expect = 8.850e-90 Identity = 147/211 (69.67%), Postives = 172/211 (81.52%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSE 633 FVLVDESHRSQYG +HAKM+ VFPNACYIGFTGTPLLKKEK+TATKFGGFIH Y M QAV DGAVTP+LYEGRMSEL GDQ QIDKWF+RITKDL+ EQKADLK KFRREEEL+K +R+ E+A+DI HF NF+N KGQFAVSSKAMAL+Y + F+E G+ VT VVISPPDTRE N+T++E + E+Q FW+ MM +G++ Sbjct: 438 FVLVDESHRSQYGVSHAKMQNVFPNACYIGFTGTPLLKKEKATATKFGGFIHKYTMNQAVADGAVTPLLYEGRMSELHGDQAQIDKWFERITKDLTTEQKADLKNKFRREEELSKAEQRLGEIAYDIGQHFKNNFRNIGKKGQFAVSSKAMALRYKKYFDEFGD------VTAEVVISPPDTREGNKTVDEDTLEEVQVFWKSMMARYGND 642
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Match: A0A291IHN4_9GAMM (Type I restriction enzyme endonuclease subunit n=7 Tax=Methylococcaceae TaxID=403 RepID=A0A291IHN4_9GAMM) HSP 1 Score: 288 bits (738), Expect = 8.930e-88 Identity = 142/211 (67.30%), Postives = 176/211 (83.41%), Query Frame = 1 Query: 1 FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFIHSYPMRQAVEDGAVTPILYEGRMSELSGDQRQIDKWFDRITKDLSDEQKADLKKKFRREEELTKTSERVYEVAFDIATHFCENFKNSKFKGQFAVSSKAMALKYHRLFEEIGEEYPERKVTTRVVISPPDTREDNETIEEKDIPEIQKFWQEMMDEFGSE 633 FVLVDESHRSQYG +HAKM+ VFPNACYIGFTGTPLLKKEK+TA KFGGFIH Y M QAV DGAVTP+LYEGRMSEL GD+ QIDKWF+RITKDL+ EQKADLKKKFRREEEL+K+ +R+ E+A+DI HF +N++ + KGQFAVSSKAMAL+Y + F+E G+ V+T VVISPPDTRE N++++E + ++Q FW+ MM ++G++ Sbjct: 438 FVLVDESHRSQYGVSHAKMQNVFPNACYIGFTGTPLLKKEKTTAAKFGGFIHKYTMNQAVADGAVTPLLYEGRMSELHGDKAQIDKWFERITKDLTAEQKADLKKKFRREEELSKSDQRLAEIAYDIGQHFKDNYRGTGKKGQFAVSSKAMALRYKKYFDEFGD------VSTEVVISPPDTREGNKSVDEDALEDVQVFWKAMMAKYGND 642 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105245.1128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105245.1128.1 >prot_M-pyrifera_M_contig105245.1128.1 ID=prot_M-pyrifera_M_contig105245.1128.1|Name=mRNA_M-pyrifera_M_contig105245.1128.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp FVLVDESHRSQYGTAHAKMKQVFPNACYIGFTGTPLLKKEKSTATKFGGFback to top mRNA from alignment at M-pyrifera_M_contig105245:1..636- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105245.1128.1 ID=mRNA_M-pyrifera_M_contig105245.1128.1|Name=mRNA_M-pyrifera_M_contig105245.1128.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig105245:1..636- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105245:1..636- >mRNA_M-pyrifera_M_contig105245.1128.1 ID=mRNA_M-pyrifera_M_contig105245.1128.1|Name=mRNA_M-pyrifera_M_contig105245.1128.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig105245:1..636- (Macrocystis pyrifera P11B4 male)back to top |