mRNA_M-pyrifera_M_contig105241.1125.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A6N7FPY7_9ACTN (Flagellar M-ring protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FPY7_9ACTN) HSP 1 Score: 212 bits (540), Expect = 1.300e-62 Identity = 114/211 (54.03%), Postives = 153/211 (72.51%), Query Frame = 1 Query: 4 AVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIES--GATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAGTSGSSNQTREFE 630 AV+ G+ + ++ ++APL+ DLE +DAAAV + L S GVPYEL D GRTVLVPRDQ+Y+LR+ L+ +GLP GG+ G+S+LD+QGIT+++F QR+ +QRALEGEL+ + +DAV+ A+V LV+P+DD FA D ++ASVLI + G TL P+QVQAIVNLVS SV+GL +A++VAD SG VL APG E S QT FE Sbjct: 32 AVILGVLVAGRFSGKPDLAPLFTDLEASDAAAVTERLTSDGVPYELGDGGRTVLVPRDQLYELRINLAASGLPSGGTSGWSVLDDQGITASEFSQRVGYQRALEGELSKMVSSLDAVETATVRLVLPRDDAFALSDSKSSASVLIRTRPGRTLEPQQVQAIVNLVSSSVQGLDPEAVSVADTSGSVLVAPGSGMAEGVAGSSQQQQTDAFE 242
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A372J6T4_9ACTN (Flagellar M-ring protein n=1 Tax=Geodermatophilus sp. LHW52908 TaxID=2303986 RepID=A0A372J6T4_9ACTN) HSP 1 Score: 205 bits (521), Expect = 6.230e-60 Identity = 108/198 (54.55%), Postives = 146/198 (73.74%), Query Frame = 1 Query: 7 VLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIE--SGATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAG 594 VLGGL +F W +T APL+++L + DA+A+VDELN+ GV YELAD G T++VP DQVYDLRL +S GLP G GY+LLD QGITS++FQQ++ +QRA+EGELA T+ +D V +A VH+ +P+D++F +D TASVL++ +G TL+ EQVQA+ NLVS SV+ + D +TVAD +G VL+APGQ AG Sbjct: 35 VLGGL-VFYRWITTPTYAPLFSNLASTDASAIVDELNASGVGYELADGGSTIMVPNDQVYDLRLSMSGKGLPAGSETGYALLDEQGITSSEFQQQVQYQRAIEGELAMTLESLDGVRSAVVHVALPEDEVFVSDQGEPTASVLLDLAAGTTLSGEQVQAVTNLVSSSVQDMEPDQVTVADSTGRVLSAPGQGVTAAAG 231
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A238W861_9ACTN (Flagellar basal-body M-ring protein/flagellar hook-basal body protein (FliF) n=1 Tax=Blastococcus sp. DSM 44272 TaxID=1938746 RepID=A0A238W861_9ACTN) HSP 1 Score: 192 bits (489), Expect = 1.820e-58 Identity = 97/190 (51.05%), Postives = 140/190 (73.68%), Query Frame = 1 Query: 7 VLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIE--SGATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPG 570 +LGG + F W + APL+++L + DA+A+VDELN+ GV YEL D G+T++V +DQVYDLRL +S GLP G GY+LLD QGIT+++FQQ++ +QRALEGEL+ T+ +D V++A VH+ +P+D++F D TASVL++ +G TL+ EQ+QA+ NLVS S++G+ +TV D +G VLAAPG Sbjct: 35 LLGGFFFFR-WITAPTQAPLFSNLASTDASAIVDELNAAGVAYELTDGGQTIMVAKDQVYDLRLTMSGQGLPAGQDTGYALLDEQGITTSEFQQQVTYQRALEGELSKTLEALDGVNSAVVHVALPEDEVFVTDQADPTASVLLDLAAGTTLSGEQIQAVTNLVSSSIQGMEPGQVTVTDAAGQVLAAPG 223
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A1Q8CYD2_9PSEU (Flagellar M-ring protein n=1 Tax=Actinophytocola xanthii TaxID=1912961 RepID=A0A1Q8CYD2_9PSEU) HSP 1 Score: 201 bits (512), Expect = 2.090e-58 Identity = 107/211 (50.71%), Postives = 151/211 (71.56%), Query Frame = 1 Query: 4 AVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIES--GATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAGTSGSSNQTREFE 630 A++ G+W+F+SW S +PL+++L DA+A+VD+L++ GVPYEL D G+TV VP+DQ+Y LRL +S AGLP GYSLLD QG+T+++F Q++ +QRALEGEL+ TI ID V+AA+VHLVIP+ D+F+ D TA+++I G ++ + VQA+V+L + SVEGL D ITVAD +G VLAAPGQ +G GS T ++E Sbjct: 34 AIVIGVWVFASWLSKPTYSPLFSNLAAKDASAIVDQLDASGVPYELTDGGQTVQVPKDQIYSLRLKMSAAGLPAQEDTGYSLLDQQGVTTSEFMQQVGYQRALEGELSKTIESIDGVNAATVHLVIPEKDVFSDDASKPTAAIMIAESPGKPVSADTVQAVVHLTASSVEGLATDDITVADSNGKVLAAPGQA-VTGSGGGGSDQATTDYE 243
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: UPI0011DFCE17 (flagellar M-ring protein FliF n=1 Tax=Nocardioides rubriscoriae TaxID=642762 RepID=UPI0011DFCE17) HSP 1 Score: 201 bits (510), Expect = 2.950e-58 Identity = 114/213 (53.52%), Postives = 148/213 (69.48%), Query Frame = 1 Query: 1 AAVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIES--GATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAGTSGSSNQTREFEQ 633 A +LGG +F WAS MAPLY+DL +DA+AVVDEL++QGV YELAD G ++VPRD VY R+ LS G+P+G GYSLLDNQG+ ++ FQ++ F+RA+EGELA TI ID VD A VHL +P+ ++F+ ATASVL+++ G TL +QVQA+VNLV+ SVEGL +TVAD SG VL+APG G SG S+ R+ Q Sbjct: 37 ALLLGGFMVFR-WASAPSMAPLYSDLSASDASAVVDELDAQGVKYELADGGTMIMVPRDVVYQTRIDLSAQGIPEGSDGGYSLLDNQGLATSDFQEQTDFKRAMEGELANTIEAIDGVDTAVVHLALPKKEVFSDSQQPATASVLVDTKPGVTLEQQQVQAVVNLVAASVEGLDPGKVTVADSSGAVLSAPG-------GESGVSSMARDQRQ 241
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A010Z0J8_9ACTN (Flagellar M-ring protein n=1 Tax=Cryptosporangium arvum DSM 44712 TaxID=927661 RepID=A0A010Z0J8_9ACTN) HSP 1 Score: 201 bits (510), Expect = 3.190e-58 Identity = 114/212 (53.77%), Postives = 149/212 (70.28%), Query Frame = 1 Query: 1 AAVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIES--GATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAGTSGSSNQTREFE 630 A V+GG + F+SWAS MA L+++L DA+A+V++L + V YELAD G T++VPRDQVYDLRL ++ GLP G GYSLLD QG+T+++F Q +++QRALEGELA+TI ID V+AA+VHL +PQ D+FA D TASVL+++ G L QVQAI+NLVS SVEG+ + +T+A G VLA GQT G S SS QT FE Sbjct: 33 ALVVGG-YFFASWASKPTMASLFSNLSATDASAIVEKLGAANVEYELADGGATIMVPRDQVYDLRLQMAGQGLPAGEDTGYSLLDKQGVTTSEFMQHVSYQRALEGELASTISSIDGVEAATVHLALPQKDVFADDQQRPTASVLVKTAAGKDLTDSQVQAIINLVSSSVEGMDSSDVTLAGADGSVLAKGGQTTTAAGGDS-SSKQTEAFE 242
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A7W7WYE6_9PSEU (Flagellar M-ring protein n=2 Tax=Saccharothrix violaceirubra TaxID=413306 RepID=A0A7W7WYE6_9PSEU) HSP 1 Score: 201 bits (510), Expect = 3.660e-58 Identity = 113/215 (52.56%), Postives = 156/215 (72.56%), Query Frame = 1 Query: 4 AVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIE--SGATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAGTSGSSNQTRE---FEQ 633 AVL G+ LF+ WAST +PL+ +L + DAAA+V++L++ G YELAD G+TV+VP++QVY LR+ LS GLP GY+LLD QG+T+++F Q++ +QRA+EGELA TI+ I+ V+ A+VHLVIP+ D+F+ D TA+V+++ SG L+ +QVQAIV+LV+ SVEGL D ITVAD +G VLAAPG A T GS NQ ++ FEQ Sbjct: 34 AVLVGVVLFTGWASTPNYSPLFTNLASKDAAAIVEQLDAAGTSYELADGGQTVMVPKEQVYQLRIQLSADGLPAQDDTGYALLDQQGVTTSEFMQQVGYQRAMEGELANTIKSINGVETATVHLVIPKKDVFSDDSSKPTAAVMVDTASGKDLSADQVQAIVHLVASSVEGLDPDDITVADSTGTVLAAPGG-----ASTGGSGNQNQQTVAFEQ 243
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A5Q2RG13_9ACTN (Flagellar M-ring protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RG13_9ACTN) HSP 1 Score: 200 bits (508), Expect = 9.590e-58 Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 1 Query: 4 AVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIES--GATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAGTSGSSNQTREFEQ 633 AV+ GL +F+ A + A LYA+LE DAAAV + L++ GV YELAD G T+ VPRD +Y+ R+ LS G+ GG +G+S+LD QGIT+++F QR+ +QRALEGELA TIR I+ V++A+VHL +P+D FA DD A+ASVLI + G TL QVQAIVNLV+ SV+ L +TVAD SG+VLAAPGQ + AG + Q FE+ Sbjct: 34 AVVVGLVVFTKLAGGTDYATLYANLEPGDAAAVTERLDADGVSYELADGGGTIRVPRDVLYETRMQLSADGVASGGQEGWSILDGQGITASEFSQRVGYQRALEGELARTIRSIEGVESATVHLALPRDTAFALDDTEASASVLISTRGGTTLDSMQVQAIVNLVASSVDKLEPSDVTVADSSGMVLAAPGQRSVDYAGNDLNMRQAAAFEE 245
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A366ZSK5_9ACTN (Flagellar M-ring protein n=1 Tax=Geodermatophilus sp. TF02-6 TaxID=2250575 RepID=A0A366ZSK5_9ACTN) HSP 1 Score: 199 bits (506), Expect = 1.060e-57 Identity = 104/198 (52.53%), Postives = 144/198 (72.73%), Query Frame = 1 Query: 7 VLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLPDGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIE--SGATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQTPFERAG 594 +LGG + F W + APL+++L +DA+A+VDELN+ GV Y+LAD G T++VP DQVYDLRL +S GLP G GY+LLD QGIT+++FQQ++++QRALEGELA T+ +D V +A VH+ +P+D++FA D ATASVL++ G L+ EQVQA+ NLVS S++ + D +TVAD +G VL+APGQ AG Sbjct: 35 LLGGFF-FYRWITAPTYAPLFSNLAASDASAIVDELNAAGVAYQLADGGATIMVPNDQVYDLRLSMSGKGLPAGSDTGYALLDEQGITTSEFQQQVSYQRALEGELATTLEALDGVRSAVVHVALPEDEVFATDQEQATASVLLDLAPGTELSGEQVQAVTNLVSSSIQDMDPDQVTVADSAGAVLSAPGQGVTAAAG 231
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Match: A0A6G6WBD4_9ACTN (Flagellar M-ring protein n=1 Tax=Nocardioides anomalus TaxID=2712223 RepID=A0A6G6WBD4_9ACTN) HSP 1 Score: 199 bits (506), Expect = 1.080e-57 Identity = 110/195 (56.41%), Postives = 145/195 (74.36%), Query Frame = 1 Query: 1 AAVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQGRTVLVPRDQVYDLRLGLSTAGLP-DGGSDGYSLLDNQGITSTQFQQRIAFQRALEGELAATIRHIDAVDAASVHLVIPQDDLFAADDIHATASVLIES--GATLAPEQVQAIVNLVSGSVEGLRADAITVADQSGLVLAAPGQT 576 A +LGG +F WAST PLY++L +DA+AVVD+L++QG PYEL D G TV+VPRDQVY R+ LS GLP D + GYS+LD+QG++ +Q QQ + F+RA+EGEL+ TI ID V+ A VHL IPQ ++FA + TASVL+++ G+TL PEQVQA+VNLV+ SV+GL D +TVAD +G VL+APGQT Sbjct: 33 ALLLGGFLVFR-WASTPSYGPLYSNLSASDASAVVDQLDTQGTPYELTDGGSTVMVPRDQVYATRIALSGEGLPADSDNQGYSILDDQGMSLSQDQQDVNFKRAMEGELSKTIEAIDGVETAVVHLAIPQKEVFAEEQDPVTASVLVKTRPGSTLDPEQVQAVVNLVASSVDGLDPDQVTVADATGAVLSAPGQT 226 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105241.1125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105241.1125.1 >prot_M-pyrifera_M_contig105241.1125.1 ID=prot_M-pyrifera_M_contig105241.1125.1|Name=mRNA_M-pyrifera_M_contig105241.1125.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp AAVLGGLWLFSSWASTVEMAPLYADLETADAAAVVDELNSQGVPYELADQback to top mRNA from alignment at M-pyrifera_M_contig105241:5..637+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105241.1125.1 ID=mRNA_M-pyrifera_M_contig105241.1125.1|Name=mRNA_M-pyrifera_M_contig105241.1125.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig105241:5..637+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105241:5..637+ >mRNA_M-pyrifera_M_contig105241.1125.1 ID=mRNA_M-pyrifera_M_contig105241.1125.1|Name=mRNA_M-pyrifera_M_contig105241.1125.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig105241:5..637+ (Macrocystis pyrifera P11B4 male)back to top |