mRNA_M-pyrifera_M_contig105128.1106.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105128.1106.1
Unique NamemRNA_M-pyrifera_M_contig105128.1106.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A6I6AFV5_9PLAN (SGNH/GDSL hydrolase family protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AFV5_9PLAN)

HSP 1 Score: 211 bits (538), Expect = 1.090e-67
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKAAKP 333
            AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAAC QAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIA+AIVKAAKP
Sbjct:  112 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACTQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIADAIVKAAKP 222
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A5A8BKY9_9PLAN (SGNH/GDSL hydrolase family protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BKY9_9PLAN)

HSP 1 Score: 210 bits (535), Expect = 5.690e-67
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKAAKP 333
            AIGENVPQLKSDAEQ RFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALK+ACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIA+AIVKAAKP
Sbjct:  131 AIGENVPQLKSDAEQTRFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKSACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIADAIVKAAKP 241
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A813AUI9_SYMMI (BlaR1 protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A813AUI9_SYMMI)

HSP 1 Score: 208 bits (530), Expect = 3.110e-60
Identity = 107/111 (96.40%), Postives = 110/111 (99.10%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKAAKP 333
            AIGENVPQLKSDAEQARFK+SVDELLK VQSESQPTIIVRSSFWSNPAKDTALK+ACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIA+AIVKAAKP
Sbjct: 1513 AIGENVPQLKSDAEQARFKNSVDELLKQVQSESQPTIIVRSSFWSNPAKDTALKSACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIADAIVKAAKP 1623
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A518ADX5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ADX5_9PLAN)

HSP 1 Score: 186 bits (473), Expect = 1.330e-57
Identity = 95/107 (88.79%), Postives = 101/107 (94.39%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVK 321
            AIGENVPQLKSD E+A FK+SVDELLKLVQSESQPTIIVRSSFW NPAKD+ALKAAC QAGGTFVDIS L KNEANYAR+ERKFEHAGVAAHPGD+GMQAIA+AIVK
Sbjct:  128 AIGENVPQLKSDEEKASFKASVDELLKLVQSESQPTIIVRSSFWPNPAKDSALKAACQQAGGTFVDISALSKNEANYARSERKFEHAGVAAHPGDRGMQAIADAIVK 234
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A518IES0_9PLAN (Uncharacterized protein n=2 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IES0_9PLAN)

HSP 1 Score: 160 bits (404), Expect = 4.480e-47
Identity = 77/111 (69.37%), Postives = 97/111 (87.39%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKAAKP 333
            AIGENVP+L+++  +A+FK+SVD+LLK +Q+++QPTIIVRS FW NPAKD AL+ AC QAGG FVDIS LGK E+NYAR+ER F+HAGVAAHPGD+GMQAIA+AI+K  +P
Sbjct:  134 AIGENVPKLETEEAKAQFKASVDQLLKELQTDNQPTIIVRSCFWPNPAKDAALRQACQQAGGMFVDISSLGKEESNYARSERDFQHAGVAAHPGDKGMQAIADAILKVVQP 244
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A517V8E3_9PLAN (Uncharacterized protein n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V8E3_9PLAN)

HSP 1 Score: 155 bits (393), Expect = 2.060e-45
Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 1 
Query:    4 IGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKAAKP 333
            IGENVPQLK+  EQA+F+SSV++LLK +Q +  PTIIVRSSFW N  KD AL+ AC +AGGTFVDI  L K E NYAR+ER+F+HAGVAAHPGDQGMQAIA+AI+KA +P
Sbjct:  135 IGENVPQLKTAEEQAKFQSSVEQLLKQLQKDHHPTIIVRSSFWPNKLKDEALRQACQKAGGTFVDIRSLSKEEKNYARSEREFQHAGVAAHPGDQGMQAIADAILKAVQP 244
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A7Y5SPT9_9BACT (SGNH/GDSL hydrolase family protein n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SPT9_9BACT)

HSP 1 Score: 154 bits (390), Expect = 6.180e-45
Identity = 77/111 (69.37%), Postives = 95/111 (85.59%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKAAKP 333
            AIGENVP LKSD E+++F +SV++LL+ V+ E +PTIIVRSSFW N AKD AL+ AC Q GGTFVDIS L K+E+NYAR+ER F+HAGVAAHPGD+GMQAIA+AI+KA +P
Sbjct:  136 AIGENVPGLKSDEEKSQFAASVEKLLQQVRGERRPTIIVRSSFWPNQAKDEALRQACRQVGGTFVDISGLSKDESNYARSERDFQHAGVAAHPGDRGMQAIADAILKALEP 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A517RHP5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RHP5_9PLAN)

HSP 1 Score: 152 bits (385), Expect = 1.340e-44
Identity = 74/108 (68.52%), Postives = 95/108 (87.96%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKA 324
            AIGENVP+L+++  + +FK+SVD+LLK +++++QPTIIVRS FW N AKD AL+ AC QAGG FVDIS LGK+E+NYAR+ER F+HAGVAAHPGD+GMQAIA+AI+KA
Sbjct:  102 AIGENVPKLETEETKMQFKASVDQLLKELRTDNQPTIIVRSCFWPNTAKDAALRQACQQAGGIFVDISSLGKDESNYARSERDFQHAGVAAHPGDKGMQAIADAILKA 209
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A6CFV6_9PLAN (SGNH_hydro domain-containing protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6CFV6_9PLAN)

HSP 1 Score: 153 bits (387), Expect = 1.570e-44
Identity = 76/108 (70.37%), Postives = 94/108 (87.04%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKA 324
            AIGENVPQLK+  EQA+F++SV++LLK +Q+E+ PTIIVRS FW    KD AL+ AC +AGGT+VDISKL K+E NYAR+ER+F+HAGVAAHPGDQGMQAIA+AI+KA
Sbjct:  131 AIGENVPQLKTTEEQAKFQASVEKLLKQLQTENHPTIIVRSCFWPIKLKDDALRQACQKAGGTYVDISKLSKDEKNYARSEREFQHAGVAAHPGDQGMQAIADAILKA 238
[Close]
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Match: A0A2E2C0S0_9PLAN (SGNH_hydro domain-containing protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C0S0_9PLAN)

HSP 1 Score: 151 bits (381), Expect = 1.260e-43
Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 1 
Query:    1 AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKDTALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQAIANAIVKA 324
            AIGENVPQLK+   QA F++SV++LLK +QS++QPTIIVRSSFW +  KD AL+ AC  AGG FVDIS LGK E NYAR+ER F+HAGVAAHPGDQGMQAIA AI+KA
Sbjct:  131 AIGENVPQLKTAEAQATFQASVEKLLKQLQSDNQPTIIVRSSFWPDQKKDDALRQACQTAGGIFVDISNLGKEEKNYARSERDFQHAGVAAHPGDQGMQAIAAAILKA 238
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105128.1106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AFV5_9PLAN1.090e-6798.20SGNH/GDSL hydrolase family protein n=7 Tax=Gimesia... [more]
A0A5A8BKY9_9PLAN5.690e-6797.30SGNH/GDSL hydrolase family protein n=1 Tax=Gimesia... [more]
A0A813AUI9_SYMMI3.110e-6096.40BlaR1 protein n=2 Tax=cellular organisms TaxID=131... [more]
A0A518ADX5_9PLAN1.330e-5788.79Uncharacterized protein n=2 Tax=Gimesia panareensi... [more]
A0A518IES0_9PLAN4.480e-4769.37Uncharacterized protein n=2 Tax=Gimesia fumaroli T... [more]
A0A517V8E3_9PLAN2.060e-4570.00Uncharacterized protein n=2 Tax=Gimesia algae TaxI... [more]
A0A7Y5SPT9_9BACT6.180e-4569.37SGNH/GDSL hydrolase family protein n=1 Tax=Pirellu... [more]
A0A517RHP5_9PLAN1.340e-4468.52Uncharacterized protein n=2 Tax=Gimesia alba TaxID... [more]
A6CFV6_9PLAN1.570e-4470.37SGNH_hydro domain-containing protein n=6 Tax=Planc... [more]
A0A2E2C0S0_9PLAN1.260e-4371.30SGNH_hydro domain-containing protein n=4 Tax=Planc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105128contigM-pyrifera_M_contig105128:3..338 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score154.8
Seed ortholog evalue2.3e-35
Seed eggNOG ortholog344747.PM8797T_30978
KEGG koko:K00612
Hectar predicted targeting categoryother localisation
EggNOG free text desc.lipolytic protein G-D-S-L family
EggNOG OGs2IZB1@203682,COG2755@1,COG2755@2
COG Functional cat.E
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size336
Cds size336
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815559.443875-CDS-M-pyrifera_M_contig105128:2..3381622815559.443875-CDS-M-pyrifera_M_contig105128:2..338Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105128 3..338 +
1692277463.7054706-CDS-M-pyrifera_M_contig105128:2..3381692277463.7054706-CDS-M-pyrifera_M_contig105128:2..338Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105128 3..338 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105128.1106.1prot_M-pyrifera_M_contig105128.1106.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105128 3..338 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105128.1106.1

>prot_M-pyrifera_M_contig105128.1106.1 ID=prot_M-pyrifera_M_contig105128.1106.1|Name=mRNA_M-pyrifera_M_contig105128.1106.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
AIGENVPQLKSDAEQARFKSSVDELLKLVQSESQPTIIVRSSFWSNPAKD
TALKAACAQAGGTFVDISKLGKNEANYARAERKFEHAGVAAHPGDQGMQA
IANAIVKAAKP*
back to top

mRNA from alignment at M-pyrifera_M_contig105128:3..338+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105128.1106.1 ID=mRNA_M-pyrifera_M_contig105128.1106.1|Name=mRNA_M-pyrifera_M_contig105128.1106.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig105128:3..338+ (Macrocystis pyrifera P11B4 male)
GCGATTGGTGAAAATGTTCCGCAGTTGAAATCCGATGCGGAACAGGCCCG
CTTCAAAAGCAGTGTAGATGAACTGCTGAAACTGGTGCAGTCAGAGAGCC
AGCCTACGATCATTGTCCGCAGCAGTTTCTGGTCAAATCCCGCCAAAGAC
ACGGCGCTGAAAGCAGCCTGTGCGCAGGCCGGTGGCACCTTTGTTGATAT
CAGCAAACTGGGTAAGAATGAAGCGAATTACGCCCGCGCGGAGCGAAAAT
TTGAACACGCCGGCGTAGCGGCTCATCCGGGCGACCAGGGAATGCAGGCG
ATCGCGAATGCCATCGTGAAAGCAGCGAAACCGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig105128:3..338+

>mRNA_M-pyrifera_M_contig105128.1106.1 ID=mRNA_M-pyrifera_M_contig105128.1106.1|Name=mRNA_M-pyrifera_M_contig105128.1106.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig105128:3..338+ (Macrocystis pyrifera P11B4 male)
GCGATTGGTGAAAATGTTCCGCAGTTGAAATCCGATGCGGAACAGGCCCG
CTTCAAAAGCAGTGTAGATGAACTGCTGAAACTGGTGCAGTCAGAGAGCC
AGCCTACGATCATTGTCCGCAGCAGTTTCTGGTCAAATCCCGCCAAAGAC
ACGGCGCTGAAAGCAGCCTGTGCGCAGGCCGGTGGCACCTTTGTTGATAT
CAGCAAACTGGGTAAGAATGAAGCGAATTACGCCCGCGCGGAGCGAAAAT
TTGAACACGCCGGCGTAGCGGCTCATCCGGGCGACCAGGGAATGCAGGCG
ATCGCGAATGCCATCGTGAAAGCAGCGAAACCGTAGGCGATTGGTGAAAA
TGTTCCGCAGTTGAAATCCGATGCGGAACAGGCCCGCTTCAAAAGCAGTG
TAGATGAACTGCTGAAACTGGTGCAGTCAGAGAGCCAGCCTACGATCATT
GTCCGCAGCAGTTTCTGGTCAAATCCCGCCAAAGACACGGCGCTGAAAGC
AGCCTGTGCGCAGGCCGGTGGCACCTTTGTTGATATCAGCAAACTGGGTA
AGAATGAAGCGAATTACGCCCGCGCGGAGCGAAAATTTGAACACGCCGGC
GTAGCGGCTCATCCGGGCGACCAGGGAATGCAGGCGATCGCGAATGCCAT
CGTGAAAGCAGCGAAACCGTAG
back to top