mRNA_M-pyrifera_M_contig104688.1007.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: A0A7S4IGE8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IGE8_9EUKA) HSP 1 Score: 151 bits (382), Expect = 1.170e-42 Identity = 64/84 (76.19%), Postives = 77/84 (91.67%), Query Frame = 1 Query: 22 VKREKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKR 273 +K EKC+VC KTVYAM++M ADG+VFHK CMKC HC+K+L LGN+AAL+GKYYCKPHFKQLFQSKGNYS+GFGE+KPTAKW+ + Sbjct: 238 IKSEKCSVCGKTVYAMDKMVADGVVFHKTCMKCTHCSKTLGLGNFAALNGKYYCKPHFKQLFQSKGNYSDGFGEEKPTAKWEAK 321
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: L8HBY3_ACACA (LIM domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HBY3_ACACA) HSP 1 Score: 127 bits (319), Expect = 1.330e-34 Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 34 KCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDK 270 KCA+C KTVYAMERM ADG+ FHK CMKC CN +L LGNYA+L+GKYYCK HFKQLF+ KGNY +GFG ++P KW K Sbjct: 6 KCAICAKTVYAMERMDADGMSFHKTCMKCEECNCTLKLGNYASLAGKYYCKTHFKQLFKLKGNYDQGFGREQPKMKWQK 84
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: A0A7S4I5N3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I5N3_9EUKA) HSP 1 Score: 125 bits (314), Expect = 1.800e-34 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 31 EKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKRASSPTFPSL 300 +KC VC VY E+++A+G VFHK C +C HC K LSLGNYA+LSG YYCKPHFK LF+ KGNYSEGFG DKPTAKW + +S S+ Sbjct: 9 DKCLVCGGRVYFNEKVSAEGKVFHKTCFRCTHCKKVLSLGNYASLSGSYYCKPHFKSLFKLKGNYSEGFGLDKPTAKWQEGSSDSVDASV 98
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: L8HG53_ACACA (SAM domain (Sterile alpha motif) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HG53_ACACA) HSP 1 Score: 133 bits (335), Expect = 3.770e-34 Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 1 Query: 22 VKREKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKRASS 282 + EKCA C KTVY ER++A+G++FH C +C HCN L LG+YA+L GKY+CKPHFKQLF++KGNYSEGFG++KPTAKW R++S Sbjct: 1055 INNEKCAACSKTVYFSERLSAEGVIFHVACFRCNHCNGKLKLGSYASLEGKYFCKPHFKQLFKAKGNYSEGFGKEKPTAKWLSRSTS 1141
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: A7RF11_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RF11_NEMVE) HSP 1 Score: 121 bits (304), Expect = 8.190e-34 Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 28 REKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKRASSPTFPS 297 +EKC VC KTVY MER+AAD V+HK C KC CN +L LGNYAAL GK YCKPHFKQLF+ KGNY EGFG ++ +W +++ T S Sbjct: 19 QEKCEVCNKTVYPMERLAADKKVYHKFCFKCNECNNTLRLGNYAALQGKVYCKPHFKQLFKVKGNYDEGFGREQHKTQWSAKSNGETSES 108
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: V9LDL7_CALMI (LIM domain-containing protein 2-like protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9LDL7_CALMI) HSP 1 Score: 119 bits (298), Expect = 4.710e-33 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 1 MSFSPGNVKREKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKR 273 MSF P +K E CA C KTVY MER+ AD L+FH C C HCN LSLG+YAAL G++YCKPHF+QLF+SKGNY EGFG + W ++ Sbjct: 1 MSFLPPQMK-ESCASCNKTVYPMERLVADKLIFHTSCFCCKHCNAKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWQQK 90
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: A9UWT8_MONBE (Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UWT8_MONBE) HSP 1 Score: 118 bits (295), Expect = 8.240e-33 Identity = 49/79 (62.03%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 37 CAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKR 273 CAVC+K VYAME++ ADG ++HK C +C CNK++SLG +AAL+G YCKPHFKQLF+SKGNY EGFG ++ KW +R Sbjct: 1 CAVCDKAVYAMEKLEADGKIYHKNCFRCSVCNKAVSLGGFAALAGALYCKPHFKQLFKSKGNYDEGFGREQHKTKWIQR 79
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: A0A401RLB5_CHIPU (LIM zinc-binding domain-containing protein n=6 Tax=Galeoidea TaxID=119195 RepID=A0A401RLB5_CHIPU) HSP 1 Score: 118 bits (295), Expect = 1.310e-32 Identity = 51/86 (59.30%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 22 VKREKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKRAS 279 V +E CA C KTVY MER+ AD LVFH C C HCN L LG+YAAL G++YCKPHF+QLF+SKGNY EGFG + +W ++A+ Sbjct: 6 VSKELCASCNKTVYPMERLVADKLVFHTSCFCCKHCNAKLRLGSYAALQGEFYCKPHFQQLFKSKGNYDEGFGRKQHKERWQQKAA 91
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: A0A7J6BEL9_AMEME (LIM zinc-binding domain-containing protein n=7 Tax=Siluroidei TaxID=1489793 RepID=A0A7J6BEL9_AMEME) HSP 1 Score: 117 bits (294), Expect = 3.160e-32 Identity = 57/97 (58.76%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 1 MSFSPGNVKREKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKW-DKRASSPT 288 +SF P +RE CA CEKTVY MER+ A+ L+FH C C HCN LSLG YAAL G++YCKPHF+QLF+SKGNY EGFG + W K A S T Sbjct: 18 LSFKP---QRETCASCEKTVYPMERLVANNLIFHTTCFCCKHCNTKLSLGTYAALQGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWASKDAESIT 111
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Match: G1PIM5_MYOLU (LIM domain containing 2 n=3 Tax=Myotis TaxID=9434 RepID=G1PIM5_MYOLU) HSP 1 Score: 118 bits (295), Expect = 3.360e-32 Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 4 SFSPGNVKREKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGNYAALSGKYYCKPHFKQLFQSKGNYSEGFGEDKPTAKWDKRASSPT 288 SFS +E CA C+KTVY MER+ AD L+FH C C HC+ LSLGNYAAL G++YCKPHF+QLF+SKGNY EGFG + W + P+ Sbjct: 30 SFSLRAQVKETCASCQKTVYPMERLVADKLIFHNSCFCCKHCHSKLSLGNYAALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWAHKEVDPS 124 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104688.1007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104688.1007.1 >prot_M-pyrifera_M_contig104688.1007.1 ID=prot_M-pyrifera_M_contig104688.1007.1|Name=mRNA_M-pyrifera_M_contig104688.1007.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp MSFSPGNVKREKCAVCEKTVYAMERMAADGLVFHKGCMKCCHCNKSLSLGback to top mRNA from alignment at M-pyrifera_M_contig104688:196..498+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104688.1007.1 ID=mRNA_M-pyrifera_M_contig104688.1007.1|Name=mRNA_M-pyrifera_M_contig104688.1007.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=303bp|location=Sequence derived from alignment at M-pyrifera_M_contig104688:196..498+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104688:196..498+ >mRNA_M-pyrifera_M_contig104688.1007.1 ID=mRNA_M-pyrifera_M_contig104688.1007.1|Name=mRNA_M-pyrifera_M_contig104688.1007.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig104688:196..498+ (Macrocystis pyrifera P11B4 male)back to top |