mRNA_M-pyrifera_M_contig104603.995.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104603.995.1
Unique NamemRNA_M-pyrifera_M_contig104603.995.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A8H7VKI4_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VKI4_9FUNG)

HSP 1 Score: 116 bits (291), Expect = 1.080e-29
Identity = 58/136 (42.65%), Postives = 86/136 (63.24%), Query Frame = 1
Query:   82 LFLAAYVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLSRSFGRPTSWRT--LALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPAI 483
            L+ A Y LLRP+SM GGKW+  W PY LYGK+D  YG+EA    +G+   QA++NLVE  LNF+ L  +     S R   +     ++T+ KT++Y+L+EF   MRH    HN + ++ I L+++PNG WI++P +
Sbjct:   21 LWDAGYCLLRPYSMEGGKWNLLWRPYNLYGKIDKFYGIEALNEHDGFTAAQASMNLVETVLNFLYLWMASDSQKSGRASLVGFSAAILTVAKTVLYWLVEFFSGMRHTG--HN-ELIDYILLWVIPNGAWIVVPGL 153          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A316YKP5_9BASI (Uncharacterized protein n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YKP5_9BASI)

HSP 1 Score: 111 bits (277), Expect = 2.350e-27
Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 1
Query:   97 YVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNF--VVLSRSFGRPTSWRT----LALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPAICTTYLYQTISRSTQ 525
            Y+LLRPHS  GGK+H  W PY LYGKVD +Y    YE   G+   Q  +N++E  LNF  V ++   GRP +WR     L L V LMT +KT++Y+L ++    +      +    +   L+ LPNG W+L+P I T Y    I+ + Q
Sbjct:   29 YILLRPHSFKGGKYHFLWQPYDLYGKVDLIYSRRFYEAFNGFTAAQGYMNIIETILNFAYVYMAAIDGRP-AWRAASPVLGLSVALMTFWKTVLYWLQDYLSGPKGWGYTGHNSAYDFFVLFALPNGFWLLVPLILTAYFAIEIAGNLQ 176          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A165NK53_EXIGL (Uncharacterized protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165NK53_EXIGL)

HSP 1 Score: 109 bits (273), Expect = 5.130e-27
Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 1
Query:   91 AAYVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLSRSFGRPTSWRTLALVVN-LMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPAICTTYLYQTISRS 519
            A Y L+RP SM GG  H  W PY+LY  VD VYGV+A E   G+   Q+ +NL+E FLN   +  +   P+ +  +  + + +MTL KT++Y+L+E+  N   V   HN + V+LITL+I+PNG+W+++P +    L + I+RS
Sbjct:   29 AGYCLMRPRSMRGGDLHWIWKPYSLYQDVDLVYGVKALEENNGFTSAQSAMNLIETFLNLYYVYLTHVSPSPYAPVVGISSAVMTLSKTVLYWLVEYYCNYCAVG--HN-NVVDLITLWIIPNGIWLIVPTLVIIRLGKDIARS 169          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A1E3Q2V4_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3Q2V4_LIPST)

HSP 1 Score: 108 bits (271), Expect = 1.170e-26
Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   91 AAYVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLSRS-FGRPTSWRTLALVVNLMT----LYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILM 474
            A+YVL RPHS PGGKWH  W PYALYG++D VYG+ A+E  +G+   QA + LVE   N+V L  S F     WR    ++ +M+      KT++Y L E     ++V   HN  F   + LYI+P+G WI +
Sbjct:   26 ASYVLSRPHSFPGGKWHFLWKPYALYGEIDYVYGLPAFEVSDGFPSAQAFMTLVEAVFNYVYLFTSYFCTSPCWRLTGAIIGMMSATSCFSKTVLYMLCEIFSGYKYVG--HNTWF-RFVFLYIMPSGPWIFV 155          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A2C5X4Z3_9PEZI (Uncharacterized protein n=2 Tax=Ceratocystis TaxID=5157 RepID=A0A2C5X4Z3_9PEZI)

HSP 1 Score: 106 bits (265), Expect = 1.940e-25
Identity = 57/135 (42.22%), Postives = 83/135 (61.48%), Query Frame = 1
Query:   97 YVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLS---RSFGRPTSWR-----TLALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMP 477
            YV LRPHSMPGG  H+FW+PYALYG++D VYG  A++  EG+   Q+ +N+VE  +  V L+   R  G+ +         +A    +MTL KT++Y+  EF     ++   HN    +LI L+I+PNG+WI+MP
Sbjct:   60 YVFLRPHSMPGGALHAFWAPYALYGEIDYVYGRPAFDAGEGFGPAQSAMNVVETLMYLVYLAAVHRGSGKLSGQHGKVVLLVAFSAAVMTLSKTVLYWANEFFSGFSNIG--HN-KISDLIVLWIIPNGLWIVMP 191          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A1X2ICQ8_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2ICQ8_9FUNG)

HSP 1 Score: 105 bits (261), Expect = 2.890e-25
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 1
Query:   91 AAYVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLSRSFGRPTSWRT-----LALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPAICTTYLYQTISRSTQ 525
            A + LLRPHSM GG  +  W PY LY K+D  YG++A E  +G+   QA LN+VE  +N V L  +   PT +       L     L+TL KT++Y+L E    M H    HN  F + I L+++PNG+WI++P      L Q+ISR  +
Sbjct:   24 AGFCLLRPHSMEGGSLNFLWRPYNLYSKIDHFYGIQALEANDGFTGAQAFLNVVESTMNLVYLYLAM-HPTKYNIHKVNLLGFAAALLTLNKTVLYWLNEIFSGMGHTG--HNSLF-DFIFLWVIPNGLWIIVPGWIAVTLGQSISRQLE 169          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A261Y5H7_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y5H7_9FUNG)

HSP 1 Score: 103 bits (256), Expect = 1.570e-24
Identity = 64/155 (41.29%), Postives = 89/155 (57.42%), Query Frame = 1
Query:   97 YVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVL------SRSFGRPTSWRTLALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPAICTTY----LYQTISRSTQNI 531
            Y LLRP SM GG  H  W+PY LYGKVD  YG  A+   +G+   QA +NLVE  +N   L      S S G+      LA    +MTL KT++YFL ++    R+  S HN D    +TLY++PNG+WIL+P+I   Y    L + +SR+++ +
Sbjct:   25 YCLLRPRSMLGGDLHWIWAPYNLYGKVDHGYGWPAFNRGDGFTSAQAWMNLVESIMNVGYLYLLEKPSVSIGQAN---LLAFAAVVMTLAKTVLYFLNDYCAGWRN--SGHN-DLYTWVTLYLVPNGMWILVPSILVIYFANDLVRRLSRTSKKV 173          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: N1QGQ0_SPHMS (Uncharacterized protein n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QGQ0_SPHMS)

HSP 1 Score: 104 bits (260), Expect = 2.310e-24
Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 1
Query:   73 STALFL--AAYVLLRPHSMPGGKWHS-FWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLSRSFG-----------------RPTSWRTLA-LVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPA 480
            ST L L  A YVLLRPHSM GGK+HS  W+PYALY ++D VYG +A +    W QTQ   NL EV    V L   +G                 R  +W  L       +T YKT++Y+LLE+     ++   HN D+  LIT++I+PNG W++ P+
Sbjct:   65 STPLVLWDAGYVLLRPHSMVGGKYHSPLWTPYALYAEIDYVYGWKALQENNSWTQTQTWFNLGEVLAYAVYLGWVWGGGYAKGKGIFEGRTLEGRRAAWAVLVGFSAASLTFYKTVMYWLLEYLSGFENIG--HN-DWTTLITMWIIPNGAWLIGPS 218          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: UPI000444A10D (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A10D)

HSP 1 Score: 102 bits (255), Expect = 2.460e-24
Identity = 56/132 (42.42%), Postives = 82/132 (62.12%), Query Frame = 1
Query:   91 AAYVLLRPHSMPGGKWHSFWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLN--FVVLSRSFGRPTSWRTLALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPA 480
            A Y  +RP SM GG  H  WSPYALY +VD VYGV+A E  +G+   Q+ LNLVE F+N  +V L+     P +   +     +MTL KT++Y+L E+        S  + + V+LITL+I+PNG+W+++P+
Sbjct:   24 AGYCFMRPRSMKGGDLHWIWSPYALYQEVDYVYGVQALEKGDGFTNAQSFLNLVETFMNLYYVYLAHVAQWPAA-PVVGFAAVVMTLSKTVLYWLQEY---FCGGCSVGHNNMVDLITLWIIPNGIWLIVPS 151          
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Match: A0A517LDE4_9PEZI (Uncharacterized protein n=1 Tax=Venturia effusa TaxID=50376 RepID=A0A517LDE4_9PEZI)

HSP 1 Score: 104 bits (260), Expect = 2.520e-24
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 1
Query:   97 YVLLRPHSMPGGKWHS-FWSPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLSRSF------------------------GRPTSWRTL-ALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYILPNGVWILMPA 480
            YVLLRPHSMPGGKWHS  W+PYALYG +D VYG  ++E  +G+   Q TLN VE  +  V L  ++                        GR      L    V +MTL KT++Y+L E+     H+   HN DF +L+ ++I+PNG W++ P+
Sbjct:   76 YVLLRPHSMPGGKWHSPIWTPYALYGTIDHVYGFPSWETHDGFPGAQGTLNAVETAMYGVYLYIAYSYGVAEVNKMGRGSPGILGRRKIVGREAGVAVLIGFAVAVMTLSKTVLYWLNEYYSGFSHIG--HN-DFQQLLFMWIIPNGAWLIAPS 226          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104603.995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H7VKI4_9FUNG1.080e-2942.65Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A316YKP5_9BASI2.350e-2739.60Uncharacterized protein n=1 Tax=Acaromyces ingoldi... [more]
A0A165NK53_EXIGL5.130e-2740.97Uncharacterized protein n=1 Tax=Exidia glandulosa ... [more]
A0A1E3Q2V4_LIPST1.170e-2642.86Uncharacterized protein n=1 Tax=Lipomyces starkeyi... [more]
A0A2C5X4Z3_9PEZI1.940e-2542.22Uncharacterized protein n=2 Tax=Ceratocystis TaxID... [more]
A0A1X2ICQ8_9FUNG2.890e-2540.00Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]
A0A261Y5H7_9FUNG1.570e-2441.29Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
N1QGQ0_SPHMS2.310e-2440.76Uncharacterized protein n=1 Tax=Sphaerulina musiva... [more]
UPI000444A10D2.460e-2442.42hypothetical protein n=1 Tax=Stereum hirsutum (str... [more]
A0A517LDE4_9PEZI2.520e-2439.61Uncharacterized protein n=1 Tax=Venturia effusa Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104603contigM-pyrifera_M_contig104603:5..636 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score104.4
Seed ortholog evalue5.8e-20
Seed eggNOG ortholog63418.F2PKH9
Hectar predicted targeting categoryother localisation
EggNOG OGs20GWN@147545,2E1YD@1,2S97T@2759,3A018@33154,3AZIN@33183,3FU2M@34384,3P26I@4751,3QUCW@4890
Best tax levelArthrodermataceae
Best eggNOG OGNA|NA|NA
Exons2
Model size543
Cds size543
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815554.0841324-CDS-M-pyrifera_M_contig104603:4..1751622815554.0841324-CDS-M-pyrifera_M_contig104603:4..175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104603 5..175 +
1692277461.3543718-CDS-M-pyrifera_M_contig104603:4..1751692277461.3543718-CDS-M-pyrifera_M_contig104603:4..175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104603 5..175 +
1622815554.0947382-CDS-M-pyrifera_M_contig104603:264..6361622815554.0947382-CDS-M-pyrifera_M_contig104603:264..636Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104603 265..636 +
1692277461.3687758-CDS-M-pyrifera_M_contig104603:264..6361692277461.3687758-CDS-M-pyrifera_M_contig104603:264..636Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104603 265..636 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104603.995.1prot_M-pyrifera_M_contig104603.995.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104603 5..636 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104603.995.1

>prot_M-pyrifera_M_contig104603.995.1 ID=prot_M-pyrifera_M_contig104603.995.1|Name=mRNA_M-pyrifera_M_contig104603.995.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
MYVGLSWVGVGGGGRGVGIEGTIPSTALFLAAYVLLRPHSMPGGKWHSFW
SPYALYGKVDTVYGVEAYEGKEGWNQTQATLNLVEVFLNFVVLSRSFGRP
TSWRTLALVVNLMTLYKTIIYFLLEFNENMRHVRSFHNGDFVELITLYIL
PNGVWILMPAICTTYLYQTISRSTQNIKQS*
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mRNA from alignment at M-pyrifera_M_contig104603:5..636+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104603.995.1 ID=mRNA_M-pyrifera_M_contig104603.995.1|Name=mRNA_M-pyrifera_M_contig104603.995.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=632bp|location=Sequence derived from alignment at M-pyrifera_M_contig104603:5..636+ (Macrocystis pyrifera P11B4 male)
ATGTACGTGGGATTGAGTTGGGTTGGAGTAGGGGGAGGTGGAAGAGGGGT AGGGATTGAGGGCACAATACCCTCCACTGCCCTTTTTCTTGCAGCATATG TACTCCTGCGGCCTCATAGTATGCCTGGTGGGAAGTGGCACTCATTTTGG TCCCCGTATGCTTTGTATGGAGTATGTGAAGTGGGGTGGTTGGTGCACTT TCATTCGATTTCTTCTCGATTTCTCATTTTCCCATTTTTCTCCCTTTTTA TTGCAACCAGAAAGTGGACACAGTGTATGGTGTGGAAGCATATGAAGGAA AAGAAGGTTGGAATCAGACTCAAGCGACGCTGAACTTGGTAGAAGTGTTT CTGAACTTTGTTGTACTTTCTCGTAGCTTTGGTCGTCCTACTTCATGGCG AACGTTGGCCTTGGTAGTGAATTTGATGACATTGTACAAAACTATCATCT ATTTCTTGCTTGAGTTCAACGAAAACATGCGACATGTGAGATCGTTCCAC AATGGTGATTTCGTTGAACTTATCACCCTCTACATCCTTCCAAACGGAGT GTGGATTCTCATGCCTGCTATCTGCACCACCTATCTTTACCAAACAATCT CACGTTCTACCCAAAACATCAAGCAATCCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104603:5..636+

>mRNA_M-pyrifera_M_contig104603.995.1 ID=mRNA_M-pyrifera_M_contig104603.995.1|Name=mRNA_M-pyrifera_M_contig104603.995.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig104603:5..636+ (Macrocystis pyrifera P11B4 male)
ATGTACGTGGGATTGAGTTGGGTTGGAGTAGGGGGAGGTGGAAGAGGGGT
AGGGATTGAGGGCACAATACCCTCCACTGCCCTTTTTCTTGCAGCATATG
TACTCCTGCGGCCTCATAGTATGCCTGGTGGGAAGTGGCACTCATTTTGG
TCCCCGTATGCTTTGTATGGAATGTACGTGGGATTGAGTTGGGTTGGAGT
AGGGGGAGGTGGAAGAGGGGTAGGGATTGAGGGCACAATACCCTCCACTG
CCCTTTTTCTTGCAGCATATGTACTCCTGCGGCCTCATAGTATGCCTGGT
GGGAAGTGGCACTCATTTTGGTCCCCGTATGCTTTGTATGGAAAAGTGGA
CACAGTGTATGGTGTGGAAGCATATGAAGGAAAAGAAGGTTGGAATCAGA
CTCAAGCGACGCTGAACTTGGTAGAAGTGTTTCTGAACTTTGTTGTACTT
TCTCGTAGCTTTGGTCGTCCTACTTCATGGCGAACGTTGGCCTTGGTAGT
GAATTTGATGACATTGTACAAAACTATCATCTATTTCTTGCTTGAGTTCA
ACGAAAACATGCGACATGTGAGATCGTTCCACAATGGTGATTTCGTTGAA
CTTATCACCCTCTACATCCTTCCAAACGGAGTGTGGATTCTCATGCCTGC
TATCTGCACCACCTATCTTTACCAAACAATCTCACGTTCTACCCAAAACA
TCAAGCAATCCTAAAAAGTGGACACAGTGTATGGTGTGGAAGCATATGAA
GGAAAAGAAGGTTGGAATCAGACTCAAGCGACGCTGAACTTGGTAGAAGT
GTTTCTGAACTTTGTTGTACTTTCTCGTAGCTTTGGTCGTCCTACTTCAT
GGCGAACGTTGGCCTTGGTAGTGAATTTGATGACATTGTACAAAACTATC
ATCTATTTCTTGCTTGAGTTCAACGAAAACATGCGACATGTGAGATCGTT
CCACAATGGTGATTTCGTTGAACTTATCACCCTCTACATCCTTCCAAACG
GAGTGTGGATTCTCATGCCTGCTATCTGCACCACCTATCTTTACCAAACA
ATCTCACGTTCTACCCAAAACATCAAGCAATCCTAA
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