mRNA_M-pyrifera_M_contig104583.990.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A0H2RSF0_9AGAM (Ribosomal RNA-processing protein 43 n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2RSF0_9AGAM) HSP 1 Score: 73.2 bits (178), Expect = 2.900e-13 Identity = 34/81 (41.98%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 52 AMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 +++A VFQ+LHP T+L RFV G RPDGR LG R ++N +S+A GSA+ ++G+T ++ +K +++P AP G++ Sbjct: 12 SLQATVFQRLHPRTYLSRFVEEGFRPDGRELGDWRDISVNVGSISTANGSALVRMGDTTIVCGVKAEIAEPDLDAPEEGFI 92
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A8H6T7D5_9AGAR (Semialdhyde-dh domain-containing protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6T7D5_9AGAR) HSP 1 Score: 70.5 bits (171), Expect = 5.660e-12 Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 49 SAMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 SA++A VFQ+LHP+T+L RFVA RPDGR R ++N +S+A GSA+ +LG T ++ +K +++P +P +G++ Sbjct: 355 SALKAAVFQRLHPHTYLERFVAEKYRPDGRQFDAWRDVSVNVGSISTADGSALVRLGETTIVCGVKAEIAEPELDSPEAGFI 436
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A8H5BTL6_9AGAR (Ribosomal RNA-processing protein 43 n=2 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5BTL6_9AGAR) HSP 1 Score: 69.3 bits (168), Expect = 8.020e-12 Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 52 AMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 A++A +FQ+LHP +L RF+A G RPDGR L R ++N +S+A GSA+ +LGNT V+ +K +++P A G++ Sbjct: 21 ALQASIFQRLHPRAYLERFLAEGFRPDGRALDAWREVSVNTGSISTADGSALVRLGNTTVVCGVKAEIAEPELDAGVRGFL 101
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A4S8MLB8_DENBC (Ribosomal RNA-processing protein 43 n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MLB8_DENBC) HSP 1 Score: 69.3 bits (168), Expect = 1.000e-11 Identity = 33/81 (40.74%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 52 AMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 A++A +FQ+LHP T+L RF+A G RPDGR L R LN +S+A GSA+ +LG T ++ +K +++P G++ Sbjct: 16 ALKAAIFQRLHPRTYLERFLAEGVRPDGRDLDEWRSIELNVGSISTANGSALVKLGQTTIVCGVKAEIAEPELDCEEEGFL 96
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A5M3MMN8_CONPW (Ribosomal RNA-processing protein 43 n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MMN8_CONPW) HSP 1 Score: 68.6 bits (166), Expect = 1.530e-11 Identity = 29/81 (35.80%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 52 AMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 A++A +FQ+LHP ++L R+++ RPDGRG R ++N +S+A GSA+ ++G+TR++ +K +++P P G++ Sbjct: 18 AIKAQIFQRLHPRSYLERYISEDVRPDGRGFEDWREVSVNVGSISTAHGSALVRMGDTRIVCGVKAEIAEPELDKPHEGFL 98
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A4Y7TEB4_9AGAR (Ribosomal RNA-processing protein 43 n=2 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TEB4_9AGAR) HSP 1 Score: 68.6 bits (166), Expect = 1.580e-11 Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 52 AMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 A++A +FQ+LHP +L RF+A G RPDGR L R ++N +S+A GSA+ +LGNT V+ +K +++P A G++ Sbjct: 22 ALQASIFQRLHPRAYLERFLAEGFRPDGRTLEGWRDVSVNTGSISTADGSALVRLGNTTVVCGVKAEIAEPELDAGNRGFL 102
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: UPI0020097556 (exosome complex component RRP43-like n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020097556) HSP 1 Score: 63.9 bits (154), Expect = 3.960e-11 Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 49 SAMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWVG 297 S ME F++L P F R + RPDGR LG R +L+ V+SA GSA+A++G T +LAAIK V PT +AP G +G Sbjct: 12 SEMELDAFRRLFPLRFHERHLLESIRPDGRPLGRARDTSLSLGAVASANGSALAKIGCTTMLAAIKLEVMTPTVEAPDEGCIG 94
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A8H6WS40_9AGAR (Ribosomal RNA-processing protein 43 n=1 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6WS40_9AGAR) HSP 1 Score: 67.0 bits (162), Expect = 4.850e-11 Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 49 SAMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 +A++A VFQ+LHP T+L RF+A RPDGR R ++N +S+A GSA+ +LG T ++ IK +++P A +G++ Sbjct: 4 AALKAAVFQRLHPRTYLERFIAESYRPDGRQFDGWRDVSVNVGSISTADGSALVRLGETAIVCGIKAEIAEPELDASEAGFL 85
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: R7T1S1_DICSQ (Ribosomal RNA-processing protein 43 n=4 Tax=Dichomitus squalens TaxID=114155 RepID=R7T1S1_DICSQ) HSP 1 Score: 67.0 bits (162), Expect = 5.690e-11 Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 52 AMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 A++A FQ+LHP T+L RF+A RPDGR R ++N +S+A GSA+ +LG+T V+ +K +++P P+ G++ Sbjct: 19 ALKALTFQRLHPKTYLERFLAENVRPDGRDFDEWRDISVNVGSISTADGSALVRLGSTTVVCGVKAEIAEPELDKPKDGFL 99
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Match: A0A2G8SV33_9APHY (Ribosomal RNA-processing protein 43 n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SV33_9APHY) HSP 1 Score: 66.6 bits (161), Expect = 8.260e-11 Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 52 AMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHTRRATLNASIVSSAAGSAVAQLGNTRVLAAIKPLVSQPTPQAPRSGWV 294 A++A FQ+LHP T+L RF+A RPDGR R ++N +S+A GSA+ +LG+T V+ +K +++P P+ G++ Sbjct: 19 ALKALTFQRLHPKTYLERFLAENVRPDGREFDEWRDISVNVGSISTADGSALVKLGSTTVVCGVKAEIAEPELDKPKEGFL 99 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104583.990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104583.990.1 >prot_M-pyrifera_M_contig104583.990.1 ID=prot_M-pyrifera_M_contig104583.990.1|Name=mRNA_M-pyrifera_M_contig104583.990.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp PPISSPPTRNLLLRPPSAMEAPVFQKLHPNTFLRRFVAAGARPDGRGLGHback to top mRNA from alignment at M-pyrifera_M_contig104583:44..355- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104583.990.1 ID=mRNA_M-pyrifera_M_contig104583.990.1|Name=mRNA_M-pyrifera_M_contig104583.990.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig104583:44..355- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104583:44..355- >mRNA_M-pyrifera_M_contig104583.990.1 ID=mRNA_M-pyrifera_M_contig104583.990.1|Name=mRNA_M-pyrifera_M_contig104583.990.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig104583:44..355- (Macrocystis pyrifera P11B4 male)back to top |