mRNA_M-pyrifera_M_contig10458.987.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10458.987.1 vs. uniprot
Match: D7FQQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ7_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 3.830e-133 Identity = 231/344 (67.15%), Postives = 258/344 (75.00%), Query Frame = 1 Query: 1 LAALGQRFASAVEVLIQEMVRERDGRTSAPSSVSIASVRDSKGRRRPTAD-HNATTRSSATAFGASGLVSMGSEVSTVTA-----SKGS------QESLLTGRGVGGXXXXSSAGVLPGGRGVCSTTDETVGEAKERCKTSPLQGKMGASRGNLGCRIEG-RETTRKHHTVSAKRGHGISSPPKGGRTSRDTAGMLNKFQFSKDALRRHQMSHESWIPEELRMKMMRRSMAVIKENVHESVAQRSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDMEVSRMRKKREQLALEKEREYWDPLRNSS 993 +A GQR + +EVL++E+ +ER R+ APSSVSIAS+RDSKGRRR + H +T+ + GA+ S+G +T T S GS +S L G G PGGRG ST E G++KERCK SPLQGKMGASR NLG R EG RE RKHHT SAKRGHG SSP KG R S G+LNKFQFSKDA+RR QMSHESWIP++LRMKM+RR MAVIKENV ESVA S+VRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDMEVSRMRKKREQLA EKEREYWDPLR ++ Sbjct: 1 MAPAGQRLTAVMEVLVRELAQERIVRSRAPSSVSIASLRDSKGRRRQVGNRHMSTSLELPRSLGANLSKSVGDVAATDTGTFSDISAGSIPKTSGHQSALKAEGGSGSDSP------PGGRGGGSTMTEAAGDSKERCKMSPLQGKMGASRKNLGARTEGGREVPRKHHTSSAKRGHGHSSPLKGNRAS-SAGGVLNKFQFSKDAIRRQQMSHESWIPDDLRMKMVRRGMAVIKENVFESVAHGSVVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDMEVSRMRKKREQLAREKEREYWDPLRKAT 337
BLAST of mRNA_M-pyrifera_M_contig10458.987.1 vs. uniprot
Match: A0A836CGB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB7_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.400e-27 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 577 LRRHQMSHESWIPEELRMKMMRRSMAVIKENVHESVAQRSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK-------------------------------------VCAFCSQLFHDPLGYRPTWDMEVSRMRKKREQLALEKEREYWDPLRNSS 993 +R+ Q+S ESWIP +LRMKM+RRS++ + ++V E+ A + K+ +++R+ LEI K QE+FG + RPCALCEQ FS VNLVLAVP+K VCAFCSQ F +P YRPT +M+ + ++ + ++E+ YWDPLR+ + Sbjct: 237 VRKPQLSQESWIPIDLRMKMLRRSISAVADSVSETAAWEKVRTKQAAKNARTSLEIAKEQERFGRECPRPCALCEQVFSSVNLVLAVPYKAIMDVREHWHEKAPHRLGPPKASHNMKRPPQCYNEVRVCAFCSQQFSEPATYRPTQEMKAAALKDAEAKEEADREKAYWDPLRHGN 412
BLAST of mRNA_M-pyrifera_M_contig10458.987.1 vs. uniprot
Match: A0A7S2LA26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA26_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.120e-7 Identity = 55/187 (29.41%), Postives = 83/187 (44.39%), Query Frame = 1 Query: 475 SAKRGHGISSPPKGGRTSRDTAGMLNKFQFSKDALRRHQMSHESWIPEELRMKMMRRSMAVIKENVHESVAQRSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK--------------------------------------VCAFCSQLFHDPLG-YRPTWDMEVS 918 S R G SP GR R + +N + ++ +R + S ESWIPE+LR +M++R +V K N +S +E +R LE +++EK+G + +R C LC++ NLVLAV K VC FC+QLF + YRP+W +V+ Sbjct: 217 SRPRTAGFFSPT--GRKGRRQSAPINVHLINSNSDQRAK-SRESWIPEDLRRRMLKREFSVAKMNYETREKCQSSNLRELQRCKSDALEKSRSKEKYGIEIKRNCGLCDRPHLSENLVLAVTLKACLDIRDSWGCKYDPEGSSRVRVNPNLRKAPACYNETRVCVFCAQLFDNQQEKYRPSWQAKVA 400 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10458.987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10458.987.1 >prot_M-pyrifera_M_contig10458.987.1 ID=prot_M-pyrifera_M_contig10458.987.1|Name=mRNA_M-pyrifera_M_contig10458.987.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=331bp LAALGQRFASAVEVLIQEMVRERDGRTSAPSSVSIASVRDSKGRRRPTADback to top mRNA from alignment at M-pyrifera_M_contig10458:5705..9662- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10458.987.1 ID=mRNA_M-pyrifera_M_contig10458.987.1|Name=mRNA_M-pyrifera_M_contig10458.987.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3958bp|location=Sequence derived from alignment at M-pyrifera_M_contig10458:5705..9662- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10458:5705..9662- >mRNA_M-pyrifera_M_contig10458.987.1 ID=mRNA_M-pyrifera_M_contig10458.987.1|Name=mRNA_M-pyrifera_M_contig10458.987.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1986bp|location=Sequence derived from alignment at M-pyrifera_M_contig10458:5705..9662- (Macrocystis pyrifera P11B4 male)back to top |