mRNA_M-pyrifera_M_contig104503.973.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104503.973.1
Unique NamemRNA_M-pyrifera_M_contig104503.973.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: A0A220W8E0_9SPHN (Acyl-CoA dehydrogenase n=13 Tax=Sphingomonadales TaxID=204457 RepID=A0A220W8E0_9SPHN)

HSP 1 Score: 412 bits (1059), Expect = 1.010e-142
Identity = 202/214 (94.39%), Postives = 211/214 (98.60%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            KDMGDHW+LNGSKTYISNGINADVVIVAAKI+GV+DKHAMVLLILERGM+GFERG+NLEKIGLHAQDTAELFFN+VK+PKENTLGTPGKGFIHLMEGLAEERLI MVGYAA+ARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVD CV IHN+GGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD
Sbjct:  141 KDMGDHWLLNGSKTYISNGINADVVIVAAKIDGVDDKHAMVLLILERGMEGFERGQNLEKIGLHAQDTAELFFNNVKIPKENTLGTPGKGFIHLMEGLAEERLIAMVGYAATARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDQCVDIHNQGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 354
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: UPI001E30FA6F (acyl-CoA dehydrogenase family protein n=1 Tax=Rhizobium sp. DKSPLA3 TaxID=2901226 RepID=UPI001E30FA6F)

HSP 1 Score: 343 bits (881), Expect = 1.180e-115
Identity = 164/213 (77.00%), Postives = 188/213 (88.26%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFT 639
            KDMGDH++LNGSKTYISNGINADVVI AAK+ G E +HAMVLLI+ER M+GF RG+NL+KIGLHAQDTAE FF++VKVPKEN LGTPGKGF HLMEGLAEERLI   GY A  RRAFD+TR++VM+R+VFGK LS  QNTQF+MAEMDA++D+ QVYVDHCVA HN G LTAN+AAK KM+GSE+EW MADLGLQ+HGGAGYM+EYEIS IFT
Sbjct:  143 KDMGDHFLLNGSKTYISNGINADVVITAAKLHGAEGRHAMVLLIVERDMEGFTRGRNLDKIGLHAQDTAEFFFDNVKVPKENVLGTPGKGFYHLMEGLAEERLIASCGYLAVGRRAFDITRDYVMQREVFGKPLSQQQNTQFRMAEMDAELDIYQVYVDHCVAEHNAGRLTANLAAKAKMVGSELEWRMADLGLQMHGGAGYMEEYEISSIFT 355
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: UPI0013E008A8 (acyl-CoA dehydrogenase family protein n=1 Tax=Tropicibacter sp. Alg240-R139 TaxID=2305991 RepID=UPI0013E008A8)

HSP 1 Score: 332 bits (852), Expect = 2.770e-111
Identity = 160/214 (74.77%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            KDMGDH+VLNGSKT+ISNGINAD+ + AAK+EG + KHAMVLL+LER M+G  RG+NL+K+GL AQDTAELFF++VKVPKEN LG PGKGF  LMEGLAEERLIG  G+ A  R AFD+TR++VMER VFGK LS+ QNTQFKMAEMDAK+DMLQVYVDH V+ HN+G LT NM+AK KMLGSEIEWEM+DLG+QLHGG GYM+EYEIS IFT+
Sbjct:  141 KDMGDHFVLNGSKTFISNGINADLFVTAAKLEGADSKHAMVLLVLERDMEGVSRGRNLKKMGLRAQDTAELFFDNVKVPKENVLGEPGKGFFMLMEGLAEERLIGACGHLAVGRHAFDITRDYVMERQVFGKALSEQQNTQFKMAEMDAKLDMLQVYVDHLVSEHNQGRLTTNMSAKAKMLGSEIEWEMSDLGVQLHGGHGYMEEYEISTIFTN 354
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: A0A395JHJ0_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Arenicella TaxID=904708 RepID=A0A395JHJ0_9GAMM)

HSP 1 Score: 330 bits (845), Expect = 3.190e-110
Identity = 156/214 (72.90%), Postives = 187/214 (87.38%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            KD GDH+VLNGSKTYISNGI AD V+VAAK+EG E  HAMVL+++ERGM+GFERG+NL+K+GL AQDTAELFFN+VKVPK+N LG PGKGF +LMEGLAEERL+  VG  +SAR+AFDVTR FVMER  FGKK+SD QNTQF MAEMDA+I++ QVY+DHCV +HN+G LTANM AK K++G+E EW+M DLG+QLHGGAGYM+EY+I R+FTD
Sbjct:  141 KDAGDHFVLNGSKTYISNGILADYVVVAAKLEGAESSHAMVLMVVERGMEGFERGRNLDKMGLKAQDTAELFFNNVKVPKDNVLGEPGKGFFYLMEGLAEERLLNAVGTISSARKAFDVTRAFVMERKAFGKKVSDFQNTQFTMAEMDAEIEVAQVYLDHCVEMHNQGKLTANMGAKLKLIGAETEWKMMDLGVQLHGGAGYMQEYDICRMFTD 354
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: A0A7Y3CXH2_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Pseudomonadales bacterium TaxID=1891229 RepID=A0A7Y3CXH2_9GAMM)

HSP 1 Score: 329 bits (843), Expect = 6.840e-110
Identity = 153/213 (71.83%), Postives = 190/213 (89.20%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFT 639
            KDMGDH++LNGSKTYISNGIN+D+V+VAAK++G +  +A+VLL++ERGM GFERG+NL+K+G  AQDTAELFF +VK+PK N LG PGKGFI+LMEGLAEERLI  VG  A+ARRAFD+TR+F M+R +FGK L+D QNTQFKMAEMDA+ID++QVY+DHCVA+HNEG LTANM AK K++GSEIEW+M DLG+QLHGGAG+M+EYEI ++FT
Sbjct:  143 KDMGDHFLLNGSKTYISNGINSDLVVVAAKLDGADSPYAVVLLLVERGMQGFERGRNLDKMGQKAQDTAELFFTNVKIPKSNVLGEPGKGFIYLMEGLAEERLISAVGTTANARRAFDITRDFCMQRKLFGKTLADQQNTQFKMAEMDAEIDVMQVYIDHCVALHNEGKLTANMGAKLKLMGSEIEWKMLDLGVQLHGGAGFMQEYEICQMFT 355
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: UPI0004E17C3C (acyl-CoA dehydrogenase family protein n=1 Tax=Parvularcula oceani TaxID=1247963 RepID=UPI0004E17C3C)

HSP 1 Score: 327 bits (838), Expect = 3.670e-109
Identity = 159/213 (74.65%), Postives = 184/213 (86.38%), Query Frame = 1 
Query:    4 DMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            D GDH+ LNG+KTYISNGINAD+VIVAAK E  +  H+MVLL++ERGM+GFERG+NLEKIGLHAQDTAELFF+DV+VPKEN LG PG+GF +LM+GLAEERLI   GY AS RRAFDVTR+FV+ER  FG ++SD QNTQFKMAEMD ++++LQV+VDHCV  HNEG L+ NMAAK K+  SE EW MADLGLQLHGGAGYMKEYEISRIFTD
Sbjct:  142 DEGDHFRLNGAKTYISNGINADLVIVAAKCEPFDKPHSMVLLVVERGMEGFERGRNLEKIGLHAQDTAELFFHDVRVPKENVLGEPGQGFRYLMQGLAEERLIAACGYLASGRRAFDVTRDFVLERPSFGGRVSDHQNTQFKMAEMDTELEILQVFVDHCVTEHNEGRLSPNMAAKAKLQTSEAEWRMADLGLQLHGGAGYMKEYEISRIFTD 354
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: UPI0019C7A1E5 (acyl-CoA dehydrogenase family protein n=2 Tax=Novosphingobium TaxID=165696 RepID=UPI0019C7A1E5)

HSP 1 Score: 327 bits (838), Expect = 4.040e-109
Identity = 154/214 (71.96%), Postives = 187/214 (87.38%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            +D GDH++LNGSKTYISNGINADVVIVAAK+ G + KHAMVLLI+ERGM+GFERG+NL+K+G+ AQDTAELFF DVKVPK N LG PGKGF +LMEGLAEERLI  VG AA+AR+AFD+TRE+VM+R +FG+ LSD QNTQF+MAEMD +I++ QVY+DHCV  HN+G LT+NM AK KM+ SE+EW+M DLG+QLHGGAG+M EY ISR+F+D
Sbjct:  144 EDKGDHFLLNGSKTYISNGINADVVIVAAKLAGADKKHAMVLLIVERGMEGFERGRNLKKMGMPAQDTAELFFKDVKVPKANVLGEPGKGFYYLMEGLAEERLISAVGCAANARKAFDITREYVMQRQLFGQPLSDQQNTQFRMAEMDTEIELAQVYIDHCVTEHNQGRLTSNMGAKAKMVASEVEWKMLDLGVQLHGGAGFMDEYPISRMFSD 357
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: A0A0R3BQ71_9BRAD (Acyl-CoA dehydrogenase n=5 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3BQ71_9BRAD)

HSP 1 Score: 324 bits (831), Expect = 4.230e-108
Identity = 154/214 (71.96%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            +D GDH++LNGSKTYISNGIN+DVVIVAAK+ G E KHAMVLLI+ERGM+GFERG+NL+K+G+ AQDTAELFFN+VKVPK N LG PGKGF +LMEGLAEERLI  VG  A+ R+AFD+TR +VM+R +FG+ L++ QNT F+MAEMDA+ID++QVYVDHCVA HN G LT+NM AK KM+ SE+EW+M DLG+QLHGGAGYM EY ISR+FTD
Sbjct:  141 EDKGDHFLLNGSKTYISNGINSDVVIVAAKLTGAEKKHAMVLLIVERGMEGFERGRNLKKMGMPAQDTAELFFNNVKVPKANVLGEPGKGFYYLMEGLAEERLISAVGSIANGRKAFDITRTYVMDRKLFGRPLAEQQNTLFRMAEMDAEIDLVQVYVDHCVAEHNAGRLTSNMGAKAKMMSSEVEWKMLDLGVQLHGGAGYMDEYPISRMFTD 354
[Close]
BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: A0A349X912_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349X912_9GAMM)

HSP 1 Score: 324 bits (830), Expect = 6.000e-108
Identity = 149/214 (69.63%), Postives = 187/214 (87.38%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            +D GDH+VLNGSKTYISNGINAD+VIVAAK+EG +  HAMVL+++ERGM+GFERG+NLEK+GL AQDTAE+FF DVK+PK+N LG PGKGF +LM+GLAEERL+  VG  + AR+AFDVTREFVM+R  FG+ ++D QNTQF+MA+MDA+I++ QVY+DHCV +HN G LTANM AK K++G+E+EW M DLG+QLHGGAGYM+EY+I R+FTD
Sbjct:  141 RDAGDHFVLNGSKTYISNGINADLVIVAAKLEGADSSHAMVLMVVERGMEGFERGRNLEKMGLKAQDTAEIFFKDVKIPKDNVLGEPGKGFFYLMDGLAEERLLNAVGTLSGARKAFDVTREFVMQRKAFGQTIADFQNTQFQMAQMDAEIEVAQVYLDHCVEMHNLGKLTANMGAKLKLIGAELEWRMMDLGVQLHGGAGYMQEYDICRMFTD 354
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BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Match: A0A1E3EY48_BRAEL (Acyl-CoA dehydrogenase n=54 Tax=Bradyrhizobium TaxID=374 RepID=A0A1E3EY48_BRAEL)

HSP 1 Score: 323 bits (829), Expect = 8.500e-108
Identity = 153/214 (71.50%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:    1 KDMGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGFERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEERLIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKIDMLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGYMKEYEISRIFTD 642
            +D GDH++LNGSKTYISNGIN+DVVIVAAK+ G E KHAMVLLI+ERGM+GF RG+NL+K+G+ AQDTAELFFN+VKVPK N LG PG+GF +LMEGLAEERLI  VG  A+ R+AFD+TR +VM+R +FG+ L++ QNTQF+MAEMDA+ID++QVYVDHCVA HN G LT+NM AK KM+ SE+EW+M DLG+QLHGGAGYM EY ISR+FTD
Sbjct:  141 EDKGDHFLLNGSKTYISNGINSDVVIVAAKLAGAEKKHAMVLLIVERGMEGFARGRNLKKMGMPAQDTAELFFNNVKVPKANVLGEPGRGFYYLMEGLAEERLISAVGSIANGRKAFDITRAYVMDRKLFGRPLAEQQNTQFRMAEMDAEIDLVQVYVDHCVAEHNAGRLTSNMGAKAKMMSSEVEWKMLDLGVQLHGGAGYMDEYPISRMFTD 354
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104503.973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A220W8E0_9SPHN1.010e-14294.39Acyl-CoA dehydrogenase n=13 Tax=Sphingomonadales T... [more]
UPI001E30FA6F1.180e-11577.00acyl-CoA dehydrogenase family protein n=1 Tax=Rhiz... [more]
UPI0013E008A82.770e-11174.77acyl-CoA dehydrogenase family protein n=1 Tax=Trop... [more]
A0A395JHJ0_9GAMM3.190e-11072.90Acyl-CoA dehydrogenase n=2 Tax=Arenicella TaxID=90... [more]
A0A7Y3CXH2_9GAMM6.840e-11071.83Acyl-CoA dehydrogenase n=1 Tax=Pseudomonadales bac... [more]
UPI0004E17C3C3.670e-10974.65acyl-CoA dehydrogenase family protein n=1 Tax=Parv... [more]
UPI0019C7A1E54.040e-10971.96acyl-CoA dehydrogenase family protein n=2 Tax=Novo... [more]
A0A0R3BQ71_9BRAD4.230e-10871.96Acyl-CoA dehydrogenase n=5 Tax=Bradyrhizobium TaxI... [more]
A0A349X912_9GAMM6.000e-10869.63Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria... [more]
A0A1E3EY48_BRAEL8.500e-10871.50Acyl-CoA dehydrogenase n=54 Tax=Bradyrhizobium Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104503contigM-pyrifera_M_contig104503:2..643 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score324.3
Seed ortholog evalue4.2e-86
Seed eggNOG ortholog1247963.JPHU01000008_gene2889
KEGG rclassRC00052,RC00068,RC00076,RC00095,RC00148,RC00246
KEGG koko:K00249
KEGG ReactionR00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754
KEGG Pathwayko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320
KEGG ModuleM00013,M00036,M00087
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acyl-CoA dehydrogenase
EggNOG OGs1MUDR@1224,2TR15@28211,COG1960@1,COG1960@2
EC1.3.8.7
COG Functional cat.I
Best tax levelAlphaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size642
Cds size636
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815552.5703142-UTR-M-pyrifera_M_contig104503:1..71622815552.5703142-UTR-M-pyrifera_M_contig104503:1..7Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104503 2..7 +
1692277460.5110383-UTR-M-pyrifera_M_contig104503:1..71692277460.5110383-UTR-M-pyrifera_M_contig104503:1..7Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104503 2..7 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815552.581204-CDS-M-pyrifera_M_contig104503:7..6431622815552.581204-CDS-M-pyrifera_M_contig104503:7..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104503 8..643 +
1692277460.5304036-CDS-M-pyrifera_M_contig104503:7..6431692277460.5304036-CDS-M-pyrifera_M_contig104503:7..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104503 8..643 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104503.973.1prot_M-pyrifera_M_contig104503.973.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104503 8..643 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104503.973.1

>prot_M-pyrifera_M_contig104503.973.1 ID=prot_M-pyrifera_M_contig104503.973.1|Name=mRNA_M-pyrifera_M_contig104503.973.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp
MGDHWVLNGSKTYISNGINADVVIVAAKIEGVEDKHAMVLLILERGMDGF
ERGKNLEKIGLHAQDTAELFFNDVKVPKENTLGTPGKGFIHLMEGLAEER
LIGMVGYAASARRAFDVTREFVMERDVFGKKLSDMQNTQFKMAEMDAKID
MLQVYVDHCVAIHNEGGLTANMAAKGKMLGSEIEWEMADLGLQLHGGAGY
MKEYEISRIFTD
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mRNA from alignment at M-pyrifera_M_contig104503:2..643+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104503.973.1 ID=mRNA_M-pyrifera_M_contig104503.973.1|Name=mRNA_M-pyrifera_M_contig104503.973.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig104503:2..643+ (Macrocystis pyrifera P11B4 male)
AAGGACATGGGAGACCATTGGGTCCTCAACGGATCGAAAACCTATATCTC
CAACGGCATCAATGCTGACGTTGTCATCGTCGCTGCCAAGATCGAAGGTG
TCGAGGACAAGCACGCAATGGTCCTGCTCATCCTCGAACGCGGCATGGAC
GGCTTCGAACGCGGCAAGAATCTGGAGAAAATCGGCCTGCACGCGCAGGA
TACAGCCGAGCTGTTCTTCAATGACGTCAAGGTACCAAAGGAAAATACGC
TGGGCACACCCGGCAAGGGCTTCATCCATCTGATGGAAGGGCTGGCAGAG
GAACGGCTGATCGGCATGGTCGGCTATGCCGCATCGGCGCGCCGCGCCTT
TGACGTCACGCGCGAATTTGTCATGGAACGGGACGTTTTTGGCAAGAAAT
TGTCAGATATGCAGAATACCCAGTTCAAAATGGCCGAAATGGACGCAAAA
ATTGATATGTTGCAAGTCTATGTCGATCATTGCGTCGCGATCCACAACGA
GGGCGGGCTTACTGCCAATATGGCAGCCAAGGGCAAGATGCTGGGCAGCG
AAATCGAATGGGAAATGGCCGATCTCGGCCTCCAGCTGCACGGTGGTGCC
GGCTATATGAAGGAATATGAGATCAGCCGTATCTTCACCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104503:2..643+

>mRNA_M-pyrifera_M_contig104503.973.1 ID=mRNA_M-pyrifera_M_contig104503.973.1|Name=mRNA_M-pyrifera_M_contig104503.973.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig104503:2..643+ (Macrocystis pyrifera P11B4 male)
ATGGGAGACCATTGGGTCCTCAACGGATCGAAAACCTATATCTCCAACGG
CATCAATGCTGACGTTGTCATCGTCGCTGCCAAGATCGAAGGTGTCGAGG
ACAAGCACGCAATGGTCCTGCTCATCCTCGAACGCGGCATGGACGGCTTC
GAACGCGGCAAGAATCTGGAGAAAATCGGCCTGCACGCGCAGGATACAGC
CGAGCTGTTCTTCAATGACGTCAAGGTACCAAAGGAAAATACGCTGGGCA
CACCCGGCAAGGGCTTCATCCATCTGATGGAAGGGCTGGCAGAGGAACGG
CTGATCGGCATGGTCGGCTATGCCGCATCGGCGCGCCGCGCCTTTGACGT
CACGCGCGAATTTGTCATGGAACGGGACGTTTTTGGCAAGAAATTGTCAG
ATATGCAGAATACCCAGTTCAAAATGGCCGAAATGGACGCAAAAATTGAT
ATGTTGCAAGTCTATGTCGATCATTGCGTCGCGATCCACAACGAGGGCGG
GCTTACTGCCAATATGGCAGCCAAGGGCAAGATGCTGGGCAGCGAAATCG
AATGGGAAATGGCCGATCTCGGCCTCCAGCTGCACGGTGGTGCCGGCTAT
ATGAAGGAATATGAGATCAGCCGTATCTTCACCGATATGGGAGACCATTG
GGTCCTCAACGGATCGAAAACCTATATCTCCAACGGCATCAATGCTGACG
TTGTCATCGTCGCTGCCAAGATCGAAGGTGTCGAGGACAAGCACGCAATG
GTCCTGCTCATCCTCGAACGCGGCATGGACGGCTTCGAACGCGGCAAGAA
TCTGGAGAAAATCGGCCTGCACGCGCAGGATACAGCCGAGCTGTTCTTCA
ATGACGTCAAGGTACCAAAGGAAAATACGCTGGGCACACCCGGCAAGGGC
TTCATCCATCTGATGGAAGGGCTGGCAGAGGAACGGCTGATCGGCATGGT
CGGCTATGCCGCATCGGCGCGCCGCGCCTTTGACGTCACGCGCGAATTTG
TCATGGAACGGGACGTTTTTGGCAAGAAATTGTCAGATATGCAGAATACC
CAGTTCAAAATGGCCGAAATGGACGCAAAAATTGATATGTTGCAAGTCTA
TGTCGATCATTGCGTCGCGATCCACAACGAGGGCGGGCTTACTGCCAATA
TGGCAGCCAAGGGCAAGATGCTGGGCAGCGAAATCGAATGGGAAATGGCC
GATCTCGGCCTCCAGCTGCACGGTGGTGCCGGCTATATGAAGGAATATGA
GATCAGCCGTATCTTCACCGAT
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