mRNA_M-pyrifera_M_contig104493.970.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: A0A2E2BCA6_9GAMM (MFS domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E2BCA6_9GAMM) HSP 1 Score: 288 bits (736), Expect = 5.110e-92 Identity = 139/213 (65.26%), Postives = 165/213 (77.46%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 QT+LDQGH RDW +S IW+LSW++ LLF+ARA GR N +DIRLFADRNF G +LMAGYGMAMYS IVMWPLLAQ V YPAD A W+LAPRG VSA+MMI IGTW+APRVD RW+IG G I S A MM+ LS D + L+ PGL++GLAMA VF+QLSTATF TI PE+++ AAG+YN + IGGSIGIAI+ LVR+EQ+HW Sbjct: 217 QTVLDQGHMRDWXESTXIWILSWISIXFALLFIARAYGRNDNFIDIRLFADRNFTFGCLLMAGYGMAMYSNIVMWPLLAQSVFNYPADQAXWILAPRGVVSAIMMITIGTWLAPRVDMRWIIGIGLIFSAYAASMMAGLSRDAGTFSLVAPGLLMGLAMACVFAQLSTATFSTIXPEKSSXAAGIYNAVXGIGGSIGIAITXAFLVRKEQIHW 429
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: A0A1Z8WRL9_9GAMM (MFS domain-containing protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WRL9_9GAMM) HSP 1 Score: 195 bits (495), Expect = 2.700e-56 Identity = 97/213 (45.54%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 Q LD GH++DWFDSG + +L + A L+ + I+ I LF D NF IGN++MAGYGMAMY+ IV+ P+ Q+V YP TAG++L PR VSA ++ + + +D+RW I G SM+ MS+ SL+TD ++PG+++G+ MA V+S+LS +FETI + +++A GL+N+MRT+GGSIG++I S+ LV REQVHW Sbjct: 219 QMALDLGHSKDWFDSGKVVILICFSVVAGLILIHHCFNEAEPIIRIHLFKDLNFLIGNLIMAGYGMAMYAVIVLLPIAVQEVFNYPVLTAGFILTPRAIVSAFLLWFLTKVLVVHIDSRWAIILGLFFSMLGCYQMSKFSLNTDTEGFVIPGMIMGVGMAFVWSRLSVVSFETIGEKASSDATGLFNLMRTMGGSIGVSICSSYLVVREQVHW 431
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: A0A3C0BUB0_9HYPH (MFS transporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3C0BUB0_9HYPH) HSP 1 Score: 176 bits (447), Expect = 4.830e-49 Identity = 93/213 (43.66%), Postives = 130/213 (61.03%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 Q +LDQG TRDWFDS FI V + + + F+ R G+ NIVD+ L DRNFA G I A YG+ ++ TI + PLL Q ++GYPA +AG + PR VSA+ + + G + VD R+L+ G ++S I ++M++L+L D W LI PG++ G M F L+ F +I + EA+GL +MR IG SIGIA+ S LLV + Q HW Sbjct: 235 QFILDQGPTRDWFDSRFIQVFTVICLFSGAAFLMRGWGKPDNIVDLSLLKDRNFAAGLIASAAYGIPLFGTIALLPLLTQRLMGYPAMSAGLLFVPRALVSAISLAVTGGVLLRLVDPRYLVAAGLVLSAIGAIVMARLTLFVDAWGLIWPGMIAGAGMGLFFVPLNAVAFGSIADAKLDEASGLIALMRGIGSSIGIAVVSWLLVHQGQTHW 447
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: UPI001E399080 (DHA2 family efflux MFS transporter permease subunit n=1 Tax=Thiocapsa bogorovii TaxID=521689 RepID=UPI001E399080) HSP 1 Score: 175 bits (444), Expect = 1.020e-48 Identity = 93/213 (43.66%), Postives = 138/213 (64.79%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 QTLLD+G+ W+DS I +L+ A L+LFV R L E IVD+RLF DRN A+ ++LM +G+A++ TI + PLL + +LGYP +T G V+APRG +A+ M++I +A R+D+RW+I G I++ A +MS +LD LI PG++ G+ M +VF LST + T+P AGLYN+ R+IG SIG+++++T R Q+ W Sbjct: 216 QTLLDRGNQEGWWDSDLIVLLTITAVVGLILFVWRGLVAERPIVDLRLFRDRNLALASLLMLVFGLALFGTIAIQPLLMERLLGYPVETTGLVMAPRGFGAALGMLVIAR-LAGRIDSRWIIASGMIIAGTATWIMSWYNLDISPGWLIWPGVMQGVGMGSVFVTLSTLAYATLPASATDAGAGLYNLARSIGSSIGVSVAATWYTRFGQIDW 427
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: UPI00022C6B8D (MFS transporter n=1 Tax=Thiorhodovibrio sp. 970 TaxID=631362 RepID=UPI00022C6B8D) HSP 1 Score: 169 bits (429), Expect = 1.880e-48 Identity = 91/213 (42.72%), Postives = 131/213 (61.50%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 QTLLD+G+ W+ S FI VLS +A L LF+ R L E IVD+RLF DRN A+ ++LM +G+A++ TI + PL + +LGYP +T G V+APRG +A M++I + RVD RW+I G ++ A MMS +LD LILP ++ G+ M +F LST + T+P AGLYN+ R++G SIG+++++T R Q W Sbjct: 16 QTLLDRGNGEGWWSSDFILVLSIIAVVGLALFIWRGLVAERPIVDLRLFRDRNLAVASLLMLAFGLALFGTIAIQPLFMERLLGYPVETTGLVMAPRGFGAAFGMMLIAQ-LTGRVDPRWIIATGMCIAGTATWMMSWYNLDVSPIWLILPRVMQGVGMGLIFVTLSTQAYATLPASATDAGAGLYNLARSVGSSIGVSVAATWYARFGQAEW 227
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: W9VYC3_9GAMM (Permease n=2 Tax=Chromatiaceae TaxID=1046 RepID=W9VYC3_9GAMM) HSP 1 Score: 171 bits (432), Expect = 4.840e-47 Identity = 93/213 (43.66%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 QT+LD+G+ W DS FI +LS +A S L LFV R L + IVD+RLFADRN A+ + LM +G+A++ TI + PLL + +LGYP +T G V+APRG +A M+++ ++ +VD RW+I G +++ A MMS SLD LI PG++ G+ M ++F LST + T+ + AGLYN+ R+IG SIG++I++T R Q W Sbjct: 216 QTVLDRGNQEGWLDSDFILLLSLVAVSGLALFVWRGLTAKRPIVDLRLFADRNLALASTLMLVFGLALFGTIAIQPLLMERLLGYPVETTGLVMAPRGFGAAFGMLVVAR-LSGKVDPRWIIATGMVLAGSATWMMSWYSLDIGPGWLIWPGVLQGVGMGSIFVTLSTLAYATLLSSQTDAGAGLYNLSRSIGSSIGVSIAATWYSRFGQADW 427
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: G2DW65_9GAMM (Drug resistance transporter, EmrB/QacA subfamily n=2 Tax=Thiorhodococcus TaxID=57488 RepID=G2DW65_9GAMM) HSP 1 Score: 169 bits (428), Expect = 1.730e-46 Identity = 94/213 (44.13%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 QT+LD+G+ W+DSG I +L+ A L LFV R L + IVD+RLFADRN A+ + LM +G+A++ TI + PLL + +LGYP +T G V+APRG +A+ M+I+ I+ RVD RW+I G ++ A +MS +LD LI PG+V G+ M ++F LST + T+P + AGLYN+ R+IG SIG++I++T R Q W Sbjct: 212 QTMLDRGNQEGWWDSGVILLLTLTAVVGLALFVWRGLTAKQPIVDLRLFADRNLALASTLMLVFGLALFGTIAIQPLLMERLLGYPVETTGLVMAPRGLGAALGMLIVAR-ISGRVDARWIIAIGMGLAGGATWVMSWYTLDISPGWLIWPGVVQGVGMGSIFVTLSTLAYVTLPASQTDAGAGLYNLSRSIGSSIGVSIAATWYSRFGQADW 423
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: A0A1E3VUN4_9HYPH (MFS domain-containing protein n=4 Tax=Methyloceanibacter TaxID=1484898 RepID=A0A1E3VUN4_9HYPH) HSP 1 Score: 169 bits (428), Expect = 7.610e-46 Identity = 89/213 (41.78%), Postives = 124/213 (58.22%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVHW 639 Q +LDQGH RDWFDS I L+ + + F R + NI+D+ L DR+F G + + +G++++ + + PLL Q +LGYPAD AG + PRG VSA M+ I G + VD RWLIGGG I++ L M+ +L D W +I P L+ G F L+ F +P + EAAG+Y +MR IGGS GIAI S L VR+ +H+ Sbjct: 302 QLVLDQGHMRDWFDSKVIVTLTIVCIFTTVAFFMRGWNKTNNIIDLSLLKDRSFVAGTLAITLFGISLFGWMAIMPLLTQRLLGYPADLAGMLFIPRGLVSAAMLAITGGLLMRFVDPRWLIGGGLILTAAGTLPMAFFNLQVDPWAIIAPTLLAGAGTGLFFVPLTAVAFADVPNSKYDEAAGIYALMRGIGGSAGIAIVSWLFVRQAHIHF 514
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: UPI000ACC4B47 (DHA2 family efflux MFS transporter permease subunit n=1 Tax=Thioclava nitratireducens TaxID=1915078 RepID=UPI000ACC4B47) HSP 1 Score: 167 bits (423), Expect = 1.240e-45 Identity = 91/207 (43.96%), Postives = 119/207 (57.49%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVR 621 Q LLDQG ++DW S I V + A L FV R LGR IVD+RLFADRNFA GN ++AG+ +AM+ I + PL Q +LGYP AG++ PRG + M+I G + R D R L G I++ + L+LD W L PG++ G M VF +ST F+ I R EA+GLY V R +G SIGIAI ++VR Sbjct: 221 QFLLDQGESKDWLSSRVIQVAAIAAALGGLAFVIRGLGRSETIVDLRLFADRNFAAGNAIIAGFSVAMFGGIAILPLFVQGLLGYPVIEAGYLFIPRGLAAGFSMVITGAVLVNRFDPRMLAALGLILTAWSNFATGALNLDASFWQLAWPGVIGGFGMGLVFVPMSTLAFDKIDSARQNEASGLYGVTRQLGSSIGIAIVGAMIVR 427
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Match: A0A0B6WXL6_9BACT (Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pyrinomonas methylaliphatogenes TaxID=454194 RepID=A0A0B6WXL6_9BACT) HSP 1 Score: 167 bits (422), Expect = 2.070e-45 Identity = 92/212 (43.40%), Postives = 130/212 (61.32%), Query Frame = 1 Query: 1 QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFADRNFAIGNILMAGYGMAMYSTIVMWPLLAQDVLGYPADTAGWVLAPRGAVSAVMMIIIGTWIAPRVDTRWLIGGGFIVSMIAGLMMSQLSLDTDMWHLILPGLVLGLAMAAVFSQLSTATFETIPPERAAEAAGLYNVMRTIGGSIGIAISSTLLVRREQVH 636 Q +LD+G DWF+S FI LS LA AL FV L + IVD+R+FA+RNFA+G L+ G+ ++ TI + PL Q +LGYPA +G ++PRG S MII+G I +VD RWLI GF V A M + L+L+ ++ P ++ G AM +F ++T + T+P E+ A G+YN+MR +GGSIGIA+ +T L R Q+H Sbjct: 225 QIVLDKGQQEDWFESAFIVRLSLLALFALAAFVIWELTTDHPIVDLRVFANRNFAVGTALITSVGIVLFGTIALLPLFLQTLLGYPAVESGLTVSPRGFGSIASMIIVGRLIG-KVDGRWLIMFGFAVLAYATYMFAGLNLEIASGNVTWPNIISGFAMGFIFVPMTTLSISTLPNEQIGNATGVYNLMRNLGGSIGIALVTTFLARGAQMH 435 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104493.970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104493.970.1 >prot_M-pyrifera_M_contig104493.970.1 ID=prot_M-pyrifera_M_contig104493.970.1|Name=mRNA_M-pyrifera_M_contig104493.970.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp QTLLDQGHTRDWFDSGFIWVLSWLAGSALLLFVARALGREGNIVDIRLFAback to top mRNA from alignment at M-pyrifera_M_contig104493:5..643- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104493.970.1 ID=mRNA_M-pyrifera_M_contig104493.970.1|Name=mRNA_M-pyrifera_M_contig104493.970.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=639bp|location=Sequence derived from alignment at M-pyrifera_M_contig104493:5..643- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104493:5..643- >mRNA_M-pyrifera_M_contig104493.970.1 ID=mRNA_M-pyrifera_M_contig104493.970.1|Name=mRNA_M-pyrifera_M_contig104493.970.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig104493:5..643- (Macrocystis pyrifera P11B4 male)back to top |