mRNA_M-pyrifera_M_contig104454.956.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104454.956.1
Unique NamemRNA_M-pyrifera_M_contig104454.956.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A0L0HHB3_SPIPD (Mitochondrial escape protein 2 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HHB3_SPIPD)

HSP 1 Score: 91.7 bits (226), Expect = 7.880e-18
Identity = 62/219 (28.31%), Postives = 118/219 (53.88%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLA-WADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEELGYV--DDDTVAAARAVGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAV-LFEHTG--KSPGFSTAQLWRMVKLVAKEEEVLYNHALFS-IFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMF 636
            P+++I G    N+  +N  +  LL  WA   A+   A VI  +D+   A   IS  +P+  ++ + + D   +++L +++  LG    D++       +GGR TDL +L+ K++ G SP +A  ++V  A  ++R + L E  G  KS  ++  Q W++V+L++K +EVLY+   F  +FKG++  L+++  + L  +   +    ++RA  P+ +  F
Sbjct:  528 PVIVIDGFLG-NETAKNSMIYDLLVEWAAVAAEYHLAHVILISDNP-TAVKTISKAMPNKTIEMVSLSDASPDSALSVVRRRLGEAVNDEELKQCVEGLGGRLTDLELLIQKIRAGMSPNDAYLEIVLRAVSEIRKLGLGEDVGDQKSLQWTPVQFWKIVQLLSKHDEVLYDQLRFHPLFKGDESPLQAMERAGLIMLSYDNGRPYSLRASRPVYRRAF 744          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A0D2WQF7_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WQF7_CAPO3)

HSP 1 Score: 89.0 bits (219), Expect = 6.930e-17
Identity = 60/221 (27.15%), Postives = 114/221 (51.58%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEELGYVD----DDTVAAARAVGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLR----AVLFEHTGKSPGFSTAQLWRMVKLVAKEEEVLYNHALFS-IFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMF 636
            P+V+I G  D +K        +L  WA    +   A V+F +++T  A   ++  LP+   + + + D   + ++  ++  L +V     +D   +   +GGR TDL +L+ K+K G +  EA++ +V+ A  ++R    A        S  +S  QLW +++L+A+ E+V ++   +S  FKG+D+AL +L  ++L  ++  +     IRAG P+ +  F
Sbjct:  664 PVVVIDGFYDKDKDKNQLLYDRLAEWAALLVETHIAHVVFVSNNT-SAVKPLAKALPNKAFETISLSDASSDAAVSYVKRGLDHVPHVVAEDIPTSVAYLGGRLTDLQLLVQKVKAGMTAREAVSDIVQRAIVEVRKYGLAEEISDANPSMVWSRVQLWYVIQLLAQSEDVSFDEIKYSPYFKGDDKALFALERAELINVVHGNGRPLLIRAGKPVYRAAF 883          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A8H4VM72_9AGAR (Mitochondrial escape protein 2 n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4VM72_9AGAR)

HSP 1 Score: 85.1 bits (209), Expect = 1.430e-15
Identity = 65/224 (29.02%), Postives = 109/224 (48.66%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEEL-------GYVDDDTVAAARAVGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLFEHTG---KSPGFSTAQLWRMVKLVAKEEEVLYNHALFSI-FKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMFE 639
            P+V+I          +   +  L  WA   A+   A VI  +D+  E S  ++  LP   ++ + + D   ++SL  ++++L       G    DT    R +GGR +DL  L++K++ G    EA+  ++   A +LR   F       KS  ++  Q W+++KL+AK  EV Y   L    FKG++ ALR +  ++L TI+       TIR G P+ + +FE
Sbjct:  534 PIVIIRNYATSAGGSKEDVLNVLAQWAATLAENHIAHVIVLSDNR-ENSKRLAKALPTKPLNAIALSDADPKSSLSFVKQKLHDAGVDIGISSQDTHYLER-LGGRASDLESLIHKVRSGMKVDEAVDDIINRGAAELRKNAFGEDADDAKSLPWTRYQAWKVLKLLAKSPEVGYYDVLVDFPFKGDENALRGMEHAELITILTKDGRPSTIRPGKPVFRWVFE 755          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A2X0MMP8_9BASI (Mitochondrial escape protein 2 n=4 Tax=Microbotryum TaxID=34416 RepID=A0A2X0MMP8_9BASI)

HSP 1 Score: 84.7 bits (208), Expect = 1.990e-15
Identity = 61/220 (27.73%), Postives = 104/220 (47.27%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEELGYVDDDTVAAARA----VGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLF---EHTGKSPGFSTAQLWRMVKLVAKEEEVLYNHALFSI-FKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMF 636
            P+V++ G     +  Q      L  W     +   A V+F +DS   AS  +S  LP+   + + + D   E +++ ++ +L   +      A      +GGR TDL +L++K+  GA P EA+  +V   A ++R   F   E   K   ++  Q W+++  +  +EE+ Y   LF+  FK ++ ALRSL  S+   I        TIR+G P+ +  F
Sbjct:  623 PIVVLKGFAAKGESKQEVLWDVLADWTALLVENKVAHVVFTSDSV-TASKPLSRALPNKPFNVIALNDASPEAAIQFVEAKLAEFEKTLPLDAHEHVWKLGGRQTDLELLVSKIHAGAEPNEAVQDIVSRNATEIRKTFFGDDESEAKGLKWTREQAWKILTGLTGQEELKYADVLFNAPFKSDEAALRSLENSEFIIISHRDGRPSTIRSGKPVYRSAF 841          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A8H7Q4S9_MORIS (Mitochondrial escape protein 2 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4S9_MORIS)

HSP 1 Score: 84.3 bits (207), Expect = 2.630e-15
Identity = 62/219 (28.31%), Postives = 106/219 (48.40%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEELG--YVDDDTVAAARAV-GGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLF-EHTGKSP--GFSTAQLWRMVKLVAKEEEVLYNHALF-SIFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMF 636
            P+V+I         + +    +L  WA    + G A VIF + +    +  +  V+P+   + +++ D PLE S+  + + L   Y  DD +  A  V GGR TDL +L+ K++  AS  +AL  +V+    ++R   F E    S    +S  Q W++VK +A E  + Y    + + FKG D+  + +  ++L T++        IRAG P+ Q  F
Sbjct:  517 PIVIIDNYLYRESSVNSALWDELAEWAALLVENGIAHVIFVS-ANVGITKSLGKVMPNKTFENIMLSDAPLEASISYVTKHLADDYEADDALKKAVGVLGGRLTDLELLVQKMRAHASAEDALDDIVQRNMIEIRKYGFGEELQDSDELSWSGIQFWQVVKQLASENIMNYEELKWGAFFKGADKPFQGMEHAELITVVHRDGWPHAIRAGKPVYQAAF 734          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A194S4X1_RHOGW (Mitochondrial escape protein 2 n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194S4X1_RHOGW)

HSP 1 Score: 84.3 bits (207), Expect = 2.680e-15
Identity = 62/214 (28.97%), Postives = 99/214 (46.26%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEELGYVDDDTVAAA----RAVGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLF---EHTGKSPGFSTAQLWRMVKLVAKEEEVLYNHALFSIFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPL 621
            P+V+I G     +  Q      L  WA    +   A V+F ++S   A   ++  LP    + + + D   E SL+ +  +L   + D  A A      +GGR TDL +L+ K + G   GEA+  +V+  A +LR  LF   ++      +S AQ W +VK +  + E+ YN  L + F G+D  LR+L  + L  +         IR G P+
Sbjct:  605 PVVVIKGFAAKGEAKQEVLWDVLSEWAAVLVENQVAHVVFTSESATLAKP-LARALPSKPFNVITLTDASPEASLQYVAAKLASFEHDLPATAFPAVARLGGRQTDLDLLVQKTRAGQDVGEAVDDIVQRNASELRKNLFGDDQNEADKLKWSRAQAWALVKALGDKGELKYNETLLTTFGGDDGPLRALEAASLIAVHHHHGRPSLIRPGKPV 817          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A4U0VXH8_9BASI (Mitochondrial escape protein 2 n=2 Tax=unclassified Rhodotorula TaxID=2640191 RepID=A0A4U0VXH8_9BASI)

HSP 1 Score: 82.8 bits (203), Expect = 9.120e-15
Identity = 60/220 (27.27%), Postives = 104/220 (47.27%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEELGYVDD----DTVAAARAVGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLF---EHTGKSPGFSTAQLWRMVKLVAKEEEVLYNHALFSIFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMFE 639
            P+V+I G       +Q      L  WA    +   A VIF +DS    +  ++  LP    + + + D   + SL+ +  +L   D     D   A   +GGR TDL +L+ K++ G + GEA+  +++  A ++   LF   E   KS  +S  Q   ++K ++ + E+ Y   L + F G+D  LR+L  + L +I  ++    TI+ G P+ +   E
Sbjct:  613 PVVVIKGFAAKGDAMQEKLWDVLSEWAAVLVENQVAHVIFTSDSV-TTTKPLAKALPSKPFNLITLNDASPDASLQYVSAKLAAFDQTLPTDEHEAVALLGGRQTDLELLVQKIRAGQTAGEAVDDLIQRNASEIHKKLFGDDEEEAKSFKWSKQQALDLIKGLSDKGELKYAETLLTTFGGDDGPLRALESAALISIQHSNGRPSTIKPGKPVYRAACE 831          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: G7DTR8_MIXOS (Mitochondrial escape protein 2 n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7DTR8_MIXOS)

HSP 1 Score: 82.0 bits (201), Expect = 1.690e-14
Identity = 57/224 (25.45%), Postives = 106/224 (47.32%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMV-MKDVPLETSLEILQEELG------YVDDDTVAAARAVGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLF----EHTGKSPGFSTAQLWRMVKLVAKEEEVLYNHALFSIFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMFE 639
            P+V+I G  +   R Q+     L  WA    +   A V+  +DS    +  +   +P   +  M+ + D   + +L+ +  +L        ++  T AA   +GGR TDL IL+ K++ G    EA+  +V  +A ++R   F    E     P ++ +  W + K ++  +E+ Y+  L + FK ND+AL +L  S++ +I+        I+ G P+ +  F+
Sbjct:  639 PIVVIRGFYNKGGRKQDMLWTALADWAALLVENQIAHVVLTSDSV-SVTKPLQKAMPSKPMSSMINLTDASSDNALQYISAKLAELNKGDLLNKSTEAAVMQLGGRLTDLEILIQKVRGGIDLDEAVDDIVSRSAAEIRKNAFGDDNEEASNLP-WTRSHAWAICKQLSANDELKYSDTLHNTFKDNDKALHALEQSEIISIVHRDGRPSAIKPGKPVYRSAFQ 860          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: A0A8H7UBL3_9FUNG (Mitochondrial escape protein 2 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UBL3_9FUNG)

HSP 1 Score: 81.3 bits (199), Expect = 3.020e-14
Identity = 59/219 (26.94%), Postives = 105/219 (47.95%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEEL-GYVDDDTVAAARAV-GGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLF-EHTGKSPGFSTA--QLWRMVKLVAKEEEVLYNHALFS-IFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMFE 639
            P+V+I         + +    +L  W+    + G A VIF + +    +  +  V+P+   + +++ D PLE S+  + + L  Y  DD++    +V GGR TDL +L+ K++   +P EAL  +V+    ++R   F E    +   S    Q W++VK +A    + Y    +   FKG D+  + +  S+L TI+       +IR G P+ Q  F+
Sbjct:  521 PIVIIDNYLFRETSVSSTLWDELAEWSAVLVENGIAHVIFVS-ANVGITKSLGKVMPNKTFESILLSDAPLEASISYVTKHLEDYKGDDSLQQVVSVLGGRLTDLELLVQKMRAHLTPEEALNDIVQRNMIEIRKYGFGEDLSDTEDLSWTGIQFWQVVKQLATTNTINYEELKWGPFFKGADKPFQGMEHSELITIVHKDGWPHSIRPGKPVYQAAFD 738          
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Match: M7WU66_RHOT1 (Mitochondrial escape protein 2 n=3 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7WU66_RHOT1)

HSP 1 Score: 81.3 bits (199), Expect = 3.100e-14
Identity = 62/220 (28.18%), Postives = 104/220 (47.27%), Query Frame = 1
Query:    1 PLVLIAGCTDMNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAKVDKMVMKDVPLETSLEILQEELGYVDDDTVAAA----RAVGGRFTDLSILLNKLKRGASPGEALAQMVESAADDLRAVLF---EHTGKSPGFSTAQLWRMVKLVAKEEEVLYNHALFSIFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQVMFE 639
            P+V+I G     +  Q      L  WA    +   A VIF +DS   A   ++  LP    + + + D   E SL+ +  +L   D    A A      +GGR TDL +L+ K++ G +  EA+  +V+  A ++R  LF   E   K   ++  Q   +VK ++++ E+ YN  L ++F G+D  LR+L  + L ++   +     IR G P+ +   E
Sbjct:  628 PVVVIKGFAAKGEAKQEVLWDVLSEWAAVLVENQIAHVIFTSDSVTLAKP-LARALPSKPFNMISLTDASPEASLQYVSAKLASFDQTLPAEAFPSVARLGGRQTDLELLVQKIRAGQTVDEAVEDLVQRNASEIRKNLFGDDEDEAKGFKWTRDQALALVKGLSEKGELKYNETLLTLFGGDDTPLRALESAALISVGHLNGRPSVIRPGKPVYRAACE 846          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104454.956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0HHB3_SPIPD7.880e-1828.31Mitochondrial escape protein 2 n=2 Tax=Spizellomyc... [more]
A0A0D2WQF7_CAPO36.930e-1727.15Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A8H4VM72_9AGAR1.430e-1529.02Mitochondrial escape protein 2 n=1 Tax=Agrocybe pe... [more]
A0A2X0MMP8_9BASI1.990e-1527.73Mitochondrial escape protein 2 n=4 Tax=Microbotryu... [more]
A0A8H7Q4S9_MORIS2.630e-1528.31Mitochondrial escape protein 2 n=1 Tax=Mortierella... [more]
A0A194S4X1_RHOGW2.680e-1528.97Mitochondrial escape protein 2 n=1 Tax=Rhodotorula... [more]
A0A4U0VXH8_9BASI9.120e-1527.27Mitochondrial escape protein 2 n=2 Tax=unclassifie... [more]
G7DTR8_MIXOS1.690e-1425.45Mitochondrial escape protein 2 n=1 Tax=Mixia osmun... [more]
A0A8H7UBL3_9FUNG3.020e-1426.94Mitochondrial escape protein 2 n=1 Tax=Umbelopsis ... [more]
M7WU66_RHOT13.100e-1428.18Mitochondrial escape protein 2 n=3 Tax=Rhodosporid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104454contigM-pyrifera_M_contig104454:6..644 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score89.4
Seed ortholog evalue2.2e-15
Seed eggNOG ortholog109760.SPPG_03960T0
Preferred nameYME2
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019866,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0071840,GO:0097159,GO:0098573,GO:1901363
EggNOG free text desc.Plays a role in maintaining the mitochondrial genome and in controlling the mtDNA escape. Involved in the regulation of mtDNA nucleotide structure and number. May have a dispensable role in early maturation of pre-rRNA (By similarity)
EggNOG OGs28JMI@1,2QS0P@2759,39RWP@33154,3NUES@4751
COG Functional cat.A
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons1
Model size639
Cds size609
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.6042082-CDS-M-pyrifera_M_contig104454:5..6141622815551.6042082-CDS-M-pyrifera_M_contig104454:5..614Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104454 6..614 -
1692277460.061845-CDS-M-pyrifera_M_contig104454:5..6141692277460.061845-CDS-M-pyrifera_M_contig104454:5..614Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104454 6..614 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.618393-UTR-M-pyrifera_M_contig104454:614..6441622815551.618393-UTR-M-pyrifera_M_contig104454:614..644Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104454 615..644 -
1692277460.071394-UTR-M-pyrifera_M_contig104454:614..6441692277460.071394-UTR-M-pyrifera_M_contig104454:614..644Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104454 615..644 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104454.956.1prot_M-pyrifera_M_contig104454.956.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104454 6..614 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104454.956.1

>prot_M-pyrifera_M_contig104454.956.1 ID=prot_M-pyrifera_M_contig104454.956.1|Name=mRNA_M-pyrifera_M_contig104454.956.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp
MNKRLQNGFMLKLLAWADAQAQAGRARVIFFADSTFEASGGISAVLPHAK
VDKMVMKDVPLETSLEILQEELGYVDDDTVAAARAVGGRFTDLSILLNKL
KRGASPGEALAQMVESAADDLRAVLFEHTGKSPGFSTAQLWRMVKLVAKE
EEVLYNHALFSIFKGNDQALRSLLLSQLFTIIPASAGKDTIRAGSPLMQV
MFE
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mRNA from alignment at M-pyrifera_M_contig104454:6..644-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104454.956.1 ID=mRNA_M-pyrifera_M_contig104454.956.1|Name=mRNA_M-pyrifera_M_contig104454.956.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=639bp|location=Sequence derived from alignment at M-pyrifera_M_contig104454:6..644- (Macrocystis pyrifera P11B4 male)
CCCCTTGTCCTCATCGCCGGCTGCACCGACATGAACAAGAGGCTTCAGAA CGGCTTCATGCTGAAGCTGTTGGCGTGGGCTGATGCCCAGGCCCAAGCCG GCCGCGCCAGAGTCATATTCTTTGCCGACTCTACCTTTGAGGCATCAGGT GGCATCAGCGCTGTCTTGCCGCACGCCAAGGTGGACAAGATGGTGATGAA GGACGTGCCATTGGAAACTTCCCTGGAGATTCTGCAAGAAGAGCTCGGCT ACGTGGATGACGACACCGTCGCAGCCGCCAGAGCAGTTGGCGGCCGCTTC ACCGACCTCAGCATTCTCCTCAACAAGCTGAAGAGAGGAGCCTCGCCAGG AGAGGCCTTGGCACAGATGGTGGAGTCAGCAGCTGACGATTTGCGTGCTG TATTGTTTGAGCACACTGGCAAGAGCCCTGGCTTCAGCACTGCGCAGCTG TGGCGCATGGTCAAGCTCGTTGCCAAGGAGGAGGAGGTTCTCTACAACCA TGCTCTTTTCTCCATTTTCAAGGGAAATGACCAGGCACTTCGCTCACTAT TGCTCTCTCAGCTCTTTACCATCATTCCTGCCTCTGCCGGCAAGGACACC ATTCGTGCTGGGTCGCCTCTCATGCAGGTGATGTTCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104454:6..644-

>mRNA_M-pyrifera_M_contig104454.956.1 ID=mRNA_M-pyrifera_M_contig104454.956.1|Name=mRNA_M-pyrifera_M_contig104454.956.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig104454:6..644- (Macrocystis pyrifera P11B4 male)
ATGAACAAGAGGCTTCAGAACGGCTTCATGCTGAAGCTGTTGGCGTGGGC
TGATGCCCAGGCCCAAGCCGGCCGCGCCAGAGTCATATTCTTTGCCGACT
CTACCTTTGAGGCATCAGGTGGCATCAGCGCTGTCTTGCCGCACGCCAAG
GTGGACAAGATGGTGATGAAGGACGTGCCATTGGAAACTTCCCTGGAGAT
TCTGCAAGAAGAGCTCGGCTACGTGGATGACGACACCGTCGCAGCCGCCA
GAGCAGTTGGCGGCCGCTTCACCGACCTCAGCATTCTCCTCAACAAGCTG
AAGAGAGGAGCCTCGCCAGGAGAGGCCTTGGCACAGATGGTGGAGTCAGC
AGCTGACGATTTGCGTGCTGTATTGTTTGAGCACACTGGCAAGAGCCCTG
GCTTCAGCACTGCGCAGCTGTGGCGCATGGTCAAGCTCGTTGCCAAGGAG
GAGGAGGTTCTCTACAACCATGCTCTTTTCTCCATTTTCAAGGGAAATGA
CCAGGCACTTCGCTCACTATTGCTCTCTCAGCTCTTTACCATCATTCCTG
CCTCTGCCGGCAAGGACACCATTCGTGCTGGGTCGCCTCTCATGCAGGTG
ATGTTCGAGATGAACAAGAGGCTTCAGAACGGCTTCATGCTGAAGCTGTT
GGCGTGGGCTGATGCCCAGGCCCAAGCCGGCCGCGCCAGAGTCATATTCT
TTGCCGACTCTACCTTTGAGGCATCAGGTGGCATCAGCGCTGTCTTGCCG
CACGCCAAGGTGGACAAGATGGTGATGAAGGACGTGCCATTGGAAACTTC
CCTGGAGATTCTGCAAGAAGAGCTCGGCTACGTGGATGACGACACCGTCG
CAGCCGCCAGAGCAGTTGGCGGCCGCTTCACCGACCTCAGCATTCTCCTC
AACAAGCTGAAGAGAGGAGCCTCGCCAGGAGAGGCCTTGGCACAGATGGT
GGAGTCAGCAGCTGACGATTTGCGTGCTGTATTGTTTGAGCACACTGGCA
AGAGCCCTGGCTTCAGCACTGCGCAGCTGTGGCGCATGGTCAAGCTCGTT
GCCAAGGAGGAGGAGGTTCTCTACAACCATGCTCTTTTCTCCATTTTCAA
GGGAAATGACCAGGCACTTCGCTCACTATTGCTCTCTCAGCTCTTTACCA
TCATTCCTGCCTCTGCCGGCAAGGACACCATTCGTGCTGGGTCGCCTCTC
ATGCAGGTGATGTTCGAG
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